Nomia melanderi (Alkali bee): 116427636
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Entry
116427636 CDS
T07404
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116427636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nmea03041
]
116427636
03009 Ribosome biogenesis [BR:
nmea03009
]
116427636
Enzymes [BR:
nmea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116427636
Spliceosome [BR:
nmea03041
]
Complex A
U1 snRNP components
U1 related factors
116427636
Complex B
116427636
Ribosome biogenesis [BR:
nmea03009
]
Eukaryotic type
Pre-60S particles
Helicases
116427636
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DUF6505
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
116427636
NCBI-ProteinID:
XP_031834066
LinkDB
All DBs
Position
Unknown
AA seq
699 aa
AA seq
DB search
MYTNSYANHGRSRGNRDSGNRSGGGTYWNSQQQAQKEKSVKKQPRRKTPGDSLKKPSWDL
SKLPVITKNLYIPHINVLKRTTDDVAKYHIGKEITVKGNNTPSPIQAFEESNFPEYVMEE
IRKQGFAEPTAIQAQGWPIALSGRDLVGIAQTGSGKTLAYILPATVHINSQPRLNRGDGP
IVLILAPTRELAQQIQTVARDFGSSSCIRNTCIFGGSPKGPQARDLERGVEICIATPGRL
IDFLEKGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEVQA
LAEDFLTDYIQINIGSLTLAANHNIRQIVEICQEHEKEMKLSCLLREIGKDRRSKMIIFV
ETKKKVDDITKAIKREGWPAISIHGDKSQPERDYVLSEFRNGKTMILVATDVAARGLDVE
DVKYVINFDYPNSSEDYIHRIGRTGRCQSAGTAYAYFTPNNARQAKELISVLEEAGQVIN
PQLADLANSMKNQYGKGRQRWSHSRSNKDNNPGSPRSNSSPTSNSWQNQHSQASQLNHNN
INSQERTVVRHQNGYQNNRQSNFQPSYQQHPQQRQQNAYANSCPTTSSNYQTGYQNATIP
RYHNRTGTFQGSRYHNRQSTYNGSQTAGGQNVYSMPPPFMIPSNGHTDSGMQSLVNNKFF
QTNRPPPNTGACAYQSMGYGQFQAVPPYSYPYPPTPVQQ
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtataccaatagttatgccaatcacggcagatccagaggtaatcgagactctggtaac
cgcagcggaggtgggacatattggaatagtcagcaacaagcgcagaaagagaaatctgtt
aaaaaacaacctcgcagaaagactccaggcgattcattgaaaaaacctagctgggattta
tcaaagttacctgtgattacgaaaaacctctatattccacatatcaatgttttaaagagg
acaacagacgatgttgcaaaatatcacattggcaaagaaattactgtcaaaggaaataat
acaccttctccaatccaagcatttgaagaaagtaatttcccagaatatgtaatggaggaa
ataagaaaacaaggttttgctgagccaacagcgatacaagcacaaggctggccaatagca
ctgagtgggcgtgatttagttggaattgctcaaacgggatctggaaaaactctagcatat
atattaccagcgacagtgcacatcaatagtcagccacgtttaaaccgaggagacggtcca
atcgttttaatcctggcaccgactagggaattagctcagcaaattcaaaccgtcgccagg
gatttcggctcctcttcatgtattcgcaacacgtgtattttcggtggttcaccgaaaggt
ccgcaggctcgcgacctagaacgcggtgtcgagatatgtatcgcaactcccggcagattg
atcgatttcttagagaagggaaccacaaacttgcgcagatgcacttaccttgttctggat
gaggcagacagaatgttggatatgggattcgagccacagattcgcaagattatcgagcag
ataagacccgacaggcaggtgctgatgtggtctgcgacatggccaaaggaagtacaggct
ctcgccgaggatttcctcacggattatatacagatcaatattggatcgttgactctggct
gctaatcataatattcgtcaaatcgtggagatctgtcaggaacacgagaaggagatgaaa
ctgtcctgccttctcagggagatcggcaaagaccgtagaagtaaaatgataatattcgtt
gagacgaagaagaaagtggacgatatcactaaggctattaagcgagagggatggccagct
atttcaattcacggcgataaatcacagcccgagagggattacgttttatccgagttcaga
aacggcaagacaatgatcctcgttgctaccgacgtagctgcccgcggcttggacgttgag
gatgtaaaatatgtaatcaacttcgattatccgaatagttccgaagactacattcaccgt
atcggtagaaccggacgttgtcaaagcgctggcaccgcgtatgcttacttcacgcctaac
aatgcaagacaagcgaaagagctgatctctgttctagaggaagccggtcaagtaataaac
ccgcaactggctgatttggcaaactcgatgaagaaccagtatggtaaaggtcgtcagcgt
tggagtcactcccgttccaataaagacaataaccccggaagtccaaggagcaatagcagc
ccgacctcaaacagttggcagaaccaacactctcaagccagccagcttaaccacaacaac
atcaatagccaggagagaactgttgtgcggcaccaaaacgggtaccagaacaatcgtcag
agcaacttccaaccgagctatcagcaacaccctcagcagaggcagcagaatgcttatgct
aacagctgcccaaccaccagcagcaactatcaaactggttatcagaacgcaactataccg
agataccataacaggaccggcactttccaaggaagtcggtatcataaccgacagagcacg
tacaatggcagccaaacagcgggaggacagaatgtgtattccatgccgccgccgttcatg
attccatccaatggtcacaccgattccgggatgcagagcttggtgaacaataaattcttc
cagacgaatcggccgccgccgaacaccggagcctgcgcttatcagtcaatgggctatggc
caatttcaagctgtgccgccgtacagttacccttacccgccgacaccagtccagcagtga
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