KEGG   Nomia melanderi (Alkali bee): 116427962
Entry
116427962         CDS       T07404                                 
Name
(RefSeq) lysine-specific demethylase lid isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
nmea  Nomia melanderi (Alkali bee)
Brite
KEGG Orthology (KO) [BR:nmea00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:nmea01009]
    116427962
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nmea03036]
    116427962
Enzymes [BR:nmea01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     116427962
Protein phosphatases and associated proteins [BR:nmea01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     116427962
Chromosome and associated proteins [BR:nmea03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    116427962
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID zf-C5HC2 PHD JmjN PHD_ash2p_like PHD-1st_NSD PHDvar_NSD PHD_5 Cas_APE2256 Terpene_synth_C
Other DBs
NCBI-GeneID: 116427962
NCBI-ProteinID: XP_031834785
LinkDB
Position
Unknown
AA seq 1642 aa
MVSRFDTNFGCEDFFGTYHCTQDMACDRGDSDFEFIIPPEAPVFEPSIEEFHDPLGYIAK
IRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFW
ELQGSSLKIPLVERKALDLYSLHKIVTDEGGIETVTRERRWAKIANKLGYPSGRSVGSIL
KNHYERILYPFDVFKQGKTLTDIKIEPDSNINEKKDRDYKPHGIISRQQIKPPTEKFSRR
SKRFGGQEEKPEICIKQEDCKEEYDSDNDCKDGLRSANGDDNSKELKKLQFYGPGPKMAG
FNTKEGKKSNKTRGVKLVYEFDPLAKYICHNCGRGDNEENMLLCDGCDDSYHTFCLMPPL
TEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPT
SLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESPWNLNNL
PVLRGSVLGHINADISGMKVPWMYVAMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPG
SQAERFEQSMKSAAPELFHSQPDLLHQLVTIMNPNILTNEGVPVFRTDQHAGEFVVTFPR
AYHAGFNQGYNFAEAVNFAPADWLKIGRECITHYSNLRRFCVFSHDELVCKMSLDPDSLD
IGIATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCETCKTTCFLSAV
TCSCQSSQLVCLRHFKDLCDCPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKVKE
AMDPDKKSDKIELSELKELLNEAENKKFPESELLTALTTAVQDAEKCASVAQQLLNNKQR
TRTRQSVETKYKLTVEELTLFYKEITNLCCELKESDGVKFILDQVLQFQKEAEELETKDD
DCDIEQLEKCIDFGDSICIELPQLIRLKQKLAQVQWLEEVKSVQEDPKSIHRDDLAKLIE
KGMTIPPHLSIETTLSELQTLMNAIDKWEEKAKLYLHTKSRQTIPSLEEFIREADEVEAY
LPSLDVLQDTLNKAKTWTKIVEEVQARENFPYYDTLDELIKKGRSVPLHLNALPILESTL
SQAKTWKERTARTFLRKNSHCTLMEALSPRIGVGTQALKTKKSKSEESIGPVFVCDTKLD
DSNDSATVVAAFKLAEQREMEAMRNLRERNLMKTEMDDSRYCVCWRRRYGLMLQCELCKD
WFHSNCVPLPKTSYKGKLPMSKELKFLCPCCLRSRRPRLETILALLVSLQKIPIRLPEGE
ALQCLTERAMNWQDRARQALAIDEISSALAKLSVLSQKLVEAAAREKTEKIISSELKKAA
NNPELHQRVQAIAPLSGVHSDDSTLSTADDDDDVVTIDDDEPSCSTFNSNEHTYSYISKV
QRKSQSNDTTETSVMLSQSARLRLEELMMEGDLLEVALDETQHIWRILSHTNSPSTVRKY
ASYEEVQSHLNQDSKDIRKRGRKRKSEEFELLKKLGRQKMEEKNLAKRKGLQKEKKSASS
PVPMKRGPRKMKRKEGDDGPKKRGGNRKKTKQDTSDEEDDCAAVNCLRPSGREVDWVQCD
GGCEGWFHMHCVGLDRTEIAEEDDYICSNCKEAEQNSTSRAPDPLAESLGLDALLSLSQS
QGYQGTDSEADIQETTSFVRTY
NT seq 4929 nt   +upstreamnt  +downstreamnt
atggtatcgaggttcgacacgaacttcggttgcgaggattttttcgggacttatcattgc
acccaagacatggcttgcgatcgtggtgattcggacttcgaattcattataccgccagag
gcgccggtcttcgaacctagtatcgaagagtttcacgacccccttggctacatcgcgaaa
atacgaccgatcgcggagaagtctggcatttgtaagatcaaaccgccgcctaattggcag
ccaccatttgctgttgatgtagataaattcaaatttgttccaaggatacaaaggttaaat
gaattggaagcgaaaactagaataaaacttaatttcttagatcaaattgcaaaattttgg
gaacttcaaggctcttctttgaaaattcctcttgttgaacgtaaagctcttgatttgtat
tctttacacaagatagttacggatgaaggtgggattgaaacagtaacaagagaaaggagg
tgggcaaagattgcaaataaattaggttacccatctggtcgcagtgtaggaagtatatta
aagaatcattatgaaagaattttatatccatttgacgtctttaaacaaggaaaaacttta
acagatattaaaattgaaccagactccaatataaatgaaaagaaagatcgtgattataaa
ccacatggaattatatcacgacaacaaattaaacctccaactgaaaaattctcgcgtcga
tctaagagatttggtggtcaagaagaaaaaccagaaatatgtattaaacaagaagattgc
aaggaggaatatgattcagataatgattgtaaagatgggctcagaagtgcaaatggcgat
gacaatagtaaagaacttaagaaattacagttttatggacctggtccaaaaatggctggg
tttaataccaaagaaggaaagaaatcaaataaaactaggggagttaaacttgtctatgaa
tttgaccctttggcaaaatacatttgtcataattgtggaaggggtgataacgaagagaac
atgcttttatgcgatggatgcgatgacagttatcatacattctgtctgatgccaccatta
acagaaataccaaagggagattggcggtgcccaaagtgcgttgctgaggaagtttctaag
ccaatggaagcatttggtttcgaacaagcacagagagagtataccctacaacaatttgga
gagatggctgatcagtttaagagtgattactttaatatgcctgtacatatggtgccaaca
tctttagtggaaaaagaattttggagaatagtttcttcaattgatgaagatgtaacagtt
gaatatggagcagatttacacacaatggatcatggatctggatttccaaccaaaacaagc
gttaatttatttacatgcgatcaagaatatgctgagtctccatggaatttaaataatttg
ccagtgttacgtgggagtgtcttaggtcatattaatgctgacatcagtggtatgaaagta
ccatggatgtacgttgctatgtgttttgcaacattttgttggcacaatgaggatcactgg
agttattcaattaattatttacattggggagaaccaaaaacatggtatggtgtgccaggt
tctcaagcagaaagatttgaacaatcaatgaaatctgctgcaccagaactatttcacagt
cagccagatttgctccatcaattggttactataatgaatcctaatattttaactaatgaa
ggtgttccagtgtttagaactgatcaacatgcgggtgaatttgttgtaacatttcctaga
gcgtatcatgctggttttaatcaagggtataatttcgctgaagctgtaaatttcgcgcct
gccgattggcttaagattggaagagaatgtataacgcattactcaaatttaagacgattt
tgcgtattttctcatgatgagctggtatgcaaaatgtcattagatccagattccttggac
ataggaattgcaactgcaacttaccatgatatgcttcaaatggtggatgatgagaagaaa
cttagaaagaacttattggagtggggtgtaactgaagcagagcgtgaagcatttgaactt
ttaccagatgatgagagacagtgtgaaacgtgcaagacaacttgtttcttgagcgcggtt
acatgttcttgccagagttcacagttagtttgtctaagacatttcaaggatctttgtgat
tgtcccccagaaaagcatacattacgttaccgttatactttagacgaactaccaattatg
ttacaaaagctaaaattgaaagccgagtcatttgactcatgggtaacaaaagtgaaggaa
gcaatggatcccgataagaagagtgataaaattgaactgagtgaattaaaggagctctta
aatgaagcagaaaacaaaaaattcccagaaagtgaattactaacagctttaacaactgct
gtacaggatgctgaaaagtgtgcgagtgttgcacaacaacttctgaataataaacaacgt
accagaacaagacaatctgttgaaactaaatataagctcacggtagaggaattaacactt
ttttacaaagaaataacaaatctatgctgtgaacttaaggaatctgatggtgtaaaattt
atacttgatcaagtattacaatttcaaaaggaggcagaagaattggaaactaaggacgat
gattgtgatatagagcagttagagaaatgtattgattttggggattctatttgtattgag
ttacctcaacttattcgattgaaacaaaaattagcgcaagtacaatggctagaagaagtg
aagtctgtacaagaagatccaaagtctatacatcgtgacgatttagcaaaattaattgaa
aaaggtatgacaataccaccacacttaagtatagaaacgacgctttctgagttacaaaca
ttgatgaatgcaattgataagtgggaggagaaagcaaagttataccttcatacgaaaagt
agacaaactataccgtctctggaggaattcattcgtgaggctgatgaagtagaagcttac
ttaccaagcctagatgttcttcaagatacacttaataaagcaaagacttggacaaaaatt
gtggaagaagtacaagcgagagagaactttccttattatgatacactggatgagttaatt
aaaaagggtagaagcgttccattacacctgaatgctctaccaattttagagtctactctt
tcacaagcgaaaacttggaaagaaaggacagcaagaacattcctaaggaaaaactcgcat
tgcactttaatggaagctttgtcaccacgtatcggtgttggtacacaagcgttgaaaact
aagaagagtaaaagtgaagagagtattggacctgtcttcgtctgtgatacgaaactggat
gattccaatgattcggccactgtagtggctgcgtttaagttagccgaacaacgagagatg
gaagcaatgagaaatttaagagaaagaaatttaatgaaaaccgaaatggacgactctagg
tattgtgtttgttggcgacggagatatggtcttatgcttcaatgtgagctttgtaaagat
tggttccactcgaattgcgtgcccttaccgaaaacatcgtataaaggtaaattacccatg
tcgaaggaacttaaatttttgtgtccttgttgtttacgatcacggcggccgcgattagaa
acaattttggcactgttggttagtcttcagaaaattccaattcgtttaccggaaggtgaa
gccttacagtgtcttactgagcgtgcaatgaattggcaggatcgagctcgtcaagcatta
gccatagatgaaatttcatcggcgctagcaaaattgtctgtgctatcgcaaaagctggta
gaagcagccgcaagagaaaaaacagaaaaaattattagtagtgagttaaagaaggctgca
aataatcctgaactgcatcaaagagtacaagctattgctccacttagtggtgtgcactcg
gatgacagtacgcttagtacagcggatgacgacgacgatgtggttaccattgatgacgac
gaaccaagttgtagtacgtttaatagtaatgagcatacatattcatatatatctaaagtt
cagcggaaatcacaatcaaacgatacaaccgaaacctcagtcatgctctcacaatctgcg
aggttacgtttagaggaattaatgatggaaggtgatttgctagaggttgcacttgacgag
acgcaacatatttggcgcatattaagtcatacgaacagtccaagcactgtccgtaagtat
gcctcgtacgaagaggtgcagtcgcacttaaatcaagactctaaagacataagaaaacgt
ggaagaaagaggaagtctgaggagttcgagctgttaaaaaaacttggacggcaaaagatg
gaagaaaaaaatttagcgaaacgaaaggggctgcagaaagagaagaaatctgctagctca
ccggtgccaatgaagcgtggacctcgaaagatgaaacgtaaagaaggtgatgacggccca
aagaaaaggggtggtaatcggaagaagactaagcaagatacttcagatgaagaggatgac
tgtgccgcggtcaattgcttacgacccagtggaagggaagttgattgggttcagtgcgat
ggaggttgcgaaggttggttccacatgcactgtgtcggattggatcgtacagaaattgct
gaagaggatgactacatatgcagtaattgcaaagaagcagaacaaaactcgacgtcgaga
gcgccagatccgctagctgaatcattaggactggatgcacttctttcactttctcaatcc
cagggataccagggcacagacagcgaagcggacatccaagaaacgacatccttcgtcagg
acttactag

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