Nomia melanderi (Alkali bee): 116428082
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Entry
116428082 CDS
T07404
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116428082
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmea03019
]
116428082
Messenger RNA biogenesis [BR:
nmea03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116428082
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
116428082
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
116428082
NCBI-ProteinID:
XP_031835060
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKTWLASGEIKDKSTLLEYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
REEVYNWLANSIEALNFQLDKFESEMESLLAGKKKRLDKDKQDRMDELKAKLDKHRFHIR
KLETLLRMLDNMSVEVNTIKRIKDDVEYYIESSQEPDFEENEYIYDDIIGLDEVELSGVG
IPSSATTDSNNSNETGGTPTSTNSGTSPIPSPPLSSTMHNHSSDSSTDNDKKTKPVKPTA
VRPLLNSQASIPTTGSTATIKSNLLSSSTPSKTIPMTPSHNSPSSTSHHIATTNAGNFAT
VAASHSNSQAIHSTSSKTSSHSSENGLLSSSSTSSVTSNVPQTISQQHNNPAPIQTTHVL
HNQQNQNHNSETEITTPIPPSSSPQSSVSSRSSPPPANSCSPAPSAANGLMPKLPDGMSS
LKSIAQQVIVRAGLEIPPSESNRNIFDSAMANNNNNNATSEVHIPPLLGVAPLGPVPLQK
EHQMQFQMMEAAYYHMPHPSDSERLRPYLPRNLCPTPPYYQQVQLPHSDTVEFFQRLSTE
TLFFIFYYMEGSKGQYLAAKALKKQSWRFHTKYMMWFQRHEEPKVINEEYEQGTYIYFDY
EKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgacgagaaagttgcaaggtgaaatagatcggtgccttaaaaaagtaacagag
ggtgtagagacattcgaggatatttggcaaaaagttcataatgctacgaacagcaatcag
aaggagaaatatgaagcggaccttaagaaggaaatcaaaaaactccagaggttacgtgat
cagatcaaaacctggcttgcgtcaggcgagattaaggataaaagtaccttgctcgagtat
aggaagttaattgagactcaaatggaaaggtttaaagttgtagagagggaaacaaagaca
aaagcatattcaaaagaaggtttaggtgcagctcaaaaacttgacccagctcaaaaagaa
agagaagaagtctacaattggcttgcaaattccatagaagctttaaattttcagttggat
aaatttgaatcggagatggagtccctactggcaggaaaaaagaaaaggttagataaagat
aagcaggatcggatggatgaattaaaagcaaaacttgataaacaccgtttccatattcgt
aaattggaaacattgttacgtatgttggacaatatgtctgttgaagttaatactattaag
aggataaaagatgacgtagagtattatatagaatcttcgcaagaacctgattttgaggaa
aatgaatatatttatgatgatattattggtcttgatgaagtagagttgtctggggttggt
attccttcgtcagcaactactgatagcaacaacagtaatgagactggaggtacaccaacc
tcaactaactctggtacttctcccataccatcacccccattaagttctaccatgcacaac
cattcaagtgatagctctacggataatgacaaaaaaacaaagcctgtgaaaccgacagca
gtcaggccattattaaattcacaggcgagcattccaaccacgggaagcactgccactata
aaatcgaatttattatcgagcagcactccaagtaagaccattcccatgacacctagccat
aactcgcctagttctacaagtcatcacattgctacaactaatgcaggcaactttgccaca
gtagctgcttcgcatagtaattcacaagccatccattctacctctagtaaaacatcttct
catagcagtgaaaatggtttgttgtcgtcttcgtccacgtccagtgttacctccaatgtg
ccacaaacgatctcacagcagcacaataatcctgcacccatacagacgacacatgtgtta
cataatcaacaaaatcagaatcataacagtgaaactgaaattacgacgccgattccacca
tcttcttcgccacagtcgtcagttagcagtaggtcttcacctccgcccgcaaattcctgc
tcgccagcgccatccgctgccaatggtctcatgcctaagcttcctgatggcatgtcttct
ttaaaatctatagcccaacaagtaattgtccgagcaggtctggaaataccgccgtccgag
tcgaacagaaacatctttgatagtgctatggcgaataataacaacaataatgccacttcg
gaagtacacattcctcctctgcttggtgttgcgccactcggcccggtacctcttcaaaaa
gaacatcagatgcagttccagatgatggaagctgcgtactatcatatgcctcatccatct
gattctgaacgtttaagaccatatttaccaagaaacctatgtccaacacctccttattac
caacaggttcaacttcctcattcggacactgtggaattcttccaacgtctttctacggaa
acattattctttatattttattacatggaaggttctaaaggccagtatctggccgcgaaa
gcactaaaaaaacaaagttggaggtttcatactaagtatatgatgtggtttcaaagacac
gaagaaccaaaagtaattaatgaagagtacgaacagggaacctacatttattttgattat
gaaaaatggggacagaggaaaaaggagggctttacatttgaatacaagtacttagaggac
agagatctgaattaa
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