Nomia melanderi (Alkali bee): 116428364
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Entry
116428364 CDS
T07404
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
nmea
Nomia melanderi (Alkali bee)
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmea03021
]
116428364
03036 Chromosome and associated proteins [BR:
nmea03036
]
116428364
Transcription machinery [BR:
nmea03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
116428364
Chromosome and associated proteins [BR:
nmea03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
116428364
SLIK complex
116428364
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
HTH_Hrp3
CHD1-like_C
Helicase_C
Chromo
ResIII
HDA2-3
DEAD
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
116428364
NCBI-ProteinID:
XP_031835805
LinkDB
All DBs
Position
Unknown
AA seq
1796 aa
AA seq
DB search
MQKTLESESGKESGSDSENESKSDSSSSGSNTGSGSGSESDSSSSSGSGSGSGSDSEKSE
KSDAPAQSDSFQSKSSNHSTETKVRLKNESSREWDENPDIYGIRRSGRSRKEPERLATQR
ESDSDSRKKFKKKSSHNSWNSDSSDSESDDIESRRPPPSKSLNRRAAQKAKEKARARKKR
ISESSENSSFDSDDNRRQVTRRTGTAVSYKEESEERTDSEDLVEVEEGSTATVEPDNAET
IERILGQRIGKKGVTGNVTTIYAIEENGDPNPEDLSNEETEMQYLIKWKGWSHIHNTWES
EESLKAQKVKGLKKLDNFIKREREIQQWRDYAGPEDIDYFECQLELQQDLLKSYNNVERI
IAEYNKPDSEHPDYYCKWESLPYAEATWEDGALIVKKWPEKIKEFRDREESKRTPSKHCK
VLKSRPKFHQLKGQPDYMGKGRELTLRDYQMDGLNWMIHSWCKENSVILADEMGLGKTIQ
TICFLYYLFHTQQLHGPFLLVVPLSTMTSWQREMSQWAPDMNFVTYLGDVTSRNVIREYE
WCYSSKRLKFNAILTTYEIVLKDKAFLGALNWAVLLVDEAHRLKNDDSLLYKALADFHTN
HRLLITGTPLQNSLKELWALLHFIMPAKFNSWEEFEKEHDNAAQKGYSKLHKQLEPFILR
RVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWILTKNYNALRKGVKGSTMTFLNIVIELK
KCCNHAFLTKPTENERKDNNEDYLQQIIRGSGKLVLLDKLLVRLRETGHRVLIFSQMVRM
LDILGEYLQKRHFPFQRLDGSIKGELRKQALDHFNAEGSQDFCFLLSTRAGGLGINLATA
DTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVTKNSVEEEIVERAKQKMVLDHLV
IQRMDTTGRTVLDKKNAGTNNNPFNKEDLNAILKFGAEDLFKDEEDGDEEPTCDIDEILR
RAETRDEGPSTVGDELLSAFKVASFAAFEEESEPVSQPNDNDDESKDWAEIIPENYRKKV
EEEEKSKEMEDLYLPPRSRKTLQQINQSEGRGRKRKKADDSDDGEDSGSEAEGSDDERPK
KRGRPRVTPRENIKSFTDAEIRRFVKSYKKFPAPLKRLDDIAADAELQEKPMSELRFLGD
QLRSRCDACITEFESTAKENKGEEEGKGPGRKRGRGPTFKIGGVMVNAKSFSAAVKELEP
LEQALPSDSEQRSNWHIDAKLKPANFDGDWSSEDDSRLLRGIYQHGMGSWEAIKMDSSLK
LGDKILPNSKLQLKKINARAEYLLKVLKKQIDTKLGVTKARKPRKAKEVKSAITKEIIEE
NDSSGDESSKAKSKVEKPPVKKEEEVVVKKETKEEVEDVPEEKKKDKKTKKEKKENKRTK
KTKQAAGPMHFTANNEPRALDVLGDLDPSIFNECKEKMRPVKKALKALDRPDQSLSEAEQ
VAHTRQCLVQIGNQINTCLEEYRDPEQIKEWRSNLWYFVSKFTEFDAKKLYKLYKHATKK
GGDGSMSATSSPEKKEESSNPKKHTDKTYDKHIDKPQVDTNKERSQKRRVEDMEETSNSS
TPSKKHFSAISAVSSISNTSTVTIGAITITPITSTPNSTSSTTNSTDTPRHKEKESKHNK
DVKRDRDRDRDRDRAHGDRSMDRMSGGKDERIRRDSGGYSISGHYSGSREDDHWLSRDGR
DMRDGRFGDHKRDRFDSYGRMSSGYHRDRDRDRDRNMHMNDKRSDYYRYPSGPPSYGYGP
GGYGGGGGGGYPPSDIPPSHFRGRGYPGDGYPSDWRSNKDYRRDYDRRPPPPNANS
NT seq
5391 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaacattagaatctgagtctggtaaggaatctggatctgattctgaaaatgaa
agcaagagtgatagctcttcttcggggagcaatacaggatctggttcaggatcagaaagt
gactctagctcctcgagtggttccggttctggatcaggctctgattctgagaaatcagag
aagtcggatgcacctgcacaaagcgatagcttccagagcaaaagttcaaatcacagcaca
gaaacaaaagttaggcttaaaaatgagtctagtcgtgagtgggatgagaatcctgatata
tatggcatcaggagatccgggcgatctagaaaagagcctgaaaggcttgcaacacagcgt
gaaagcgatagcgatagtcgcaagaaatttaagaaaaaaagttcgcacaattcctggaat
tcagattcttcagattctgagtctgatgatattgaaagtaggagacctccgcctagtaaa
tcgctaaacagacgagcggctcaaaaggcaaaagaaaaagccagagcacggaagaaaaga
atttcagagtcgtctgaaaattcatcctttgatagtgatgataacagaagacaagttaca
agaagaactggcactgcagtgagttataaagaggaaagtgaagaaagaactgacagtgaa
gacttggtagaagttgaagaaggtagcactgcaaccgtagaacctgataatgcggaaaca
atcgaacgaattttgggacagagaattggcaagaaaggagtcacaggaaatgttacaaca
atttacgctatcgaagaaaatggagatcccaatccggaagacttatctaatgaagaaaca
gaaatgcaatatctaataaaatggaaagggtggtctcacattcataatacatgggagtca
gaggaatctttaaaagcacaaaaagttaaaggactaaaaaaattagataactttattaaa
cgagaacgagaaattcagcaatggagggattatgcaggacctgaagatatagattatttt
gaatgtcaattagaacttcagcaagatctcctgaaaagttataataatgttgaaaggatt
attgctgaatataataagccagactctgaacacccagattattattgtaaatgggagagc
ttaccatatgccgaggctacatgggaagatggagctttgattgttaagaagtggccagaa
aaaattaaggagtttcgtgatagagaagaatcaaagagaacgccaagcaaacactgcaaa
gttctgaaatcgagacccaaatttcaccagttaaaagggcaaccagattatatgggtaaa
gggcgagaattaacacttagagattatcaaatggatggattgaattggatgatacattct
tggtgtaaagaaaatagtgttattttagcagatgaaatgggtcttggtaaaacaatacaa
actatatgcttcctttattacttgttccatacacaacagcttcacgggccatttttatta
gtagttcctctatctacaatgacttcctggcaaagagaaatgtcacagtgggctccagac
atgaatttcgtaacatatttgggtgatgttacttctcgtaatgtcattagagaatacgag
tggtgttacagttcaaagagattaaaattcaatgccatacttaccacgtacgaaatagta
cttaaggacaaagcatttttgggtgccttaaattgggcagtgttattagttgacgaggcg
caccgattaaaaaatgacgattcccttttatataaagcactagccgactttcatacaaat
catcggcttttaataactggtacaccgttgcaaaacagcttgaaagaattatgggcttta
ctacacttcataatgcctgctaaatttaattcctgggaagagttcgagaaagaacatgat
aacgcggcacaaaaggggtattcgaaattgcataaacaattggaaccatttatcttgcga
cgcgtcaaaaaagatgtagaaaagtcattacctgctaaggttgaacagattctacgcgtg
gaaatgacatctttacaaaaacagtactacaaatggatattgacaaaaaattataacgca
ttacgaaaaggtgttaaaggctctactatgactttcctaaatattgttattgaattaaag
aagtgctgtaatcacgcgtttcttacaaaacctacggagaatgagagaaaagataataat
gaggactatctgcaacaaataattcgtggttctgggaagttagttcttcttgataaattg
ttggtgagactgcgggagacaggtcaccgagtattaatattcagtcaaatggttcggatg
ttagatattcttggcgaatatttgcaaaagcggcattttccattccaaaggttagatgga
agtataaaaggggaattacggaaacaggcgttagatcattttaatgcggaaggatcgcaa
gatttttgttttttattatcaactagagcaggtggtctaggtattaatctggctaccgct
gatacggttattatatttgattctgactggaatccacaaaacgatttgcaagcacaagcc
agagcacatcgtattggtcaaaagaatcaggtaaacatttatcgattagtaacaaagaat
tctgtagaagaagaaatagtagaaagagcgaagcaaaagatggtcctcgatcatcttgtg
attcaacggatggatacgactggtcgtacagtattagataaaaaaaacgcagggaccaat
aacaatccatttaacaaagaagatctaaatgctattttgaaatttggcgctgaagatttg
ttcaaggatgaagaagatggagacgaagagccgacttgcgatatcgacgaaatcctaaga
agagcggaaacaagagacgaagggccttcaacggtaggagatgaattgctgtctgcattc
aaagtagctagtttcgctgcatttgaagaagagtctgaacctgttagtcaaccaaatgac
aatgatgatgaaagtaaagactgggcggaaattattccagaaaattacaggaaaaaagtt
gaagaagaagaaaagtcgaaagaaatggaagatctatatttaccaccaagaagtcgaaaa
actctacaacaaattaatcaaagtgaaggaagaggtagaaaacgaaagaaggctgatgat
agtgatgatggagaagactctggaagtgaagctgaaggtagtgatgatgaacgtcctaag
aaaagaggtagaccgagggttactcctcgggaaaatataaaaagcttcactgatgcagaa
atacgaagatttgtgaaaagttacaagaaattccctgcaccattaaaacgtctagatgat
atagcagcagacgcggaattgcaagaaaaaccaatgtcagaattgcgtttcttgggagac
caactgagaagtagatgtgatgcttgtataactgaatttgaaagtacggccaaagaaaat
aaaggggaagaagagggtaaaggtccaggccgtaaaagaggtcgaggtccgacatttaag
attggtggtgttatggttaatgcaaaatctttctcggcagcagtaaaggaacttgaacct
ttggaacaagctttgccatcagattctgaacagcgatcgaattggcatatagatgccaaa
ttaaaacctgccaactttgatggtgattggagttctgaagatgattctagacttctgaga
ggcatataccaacatggcatgggttcatgggaagcaataaaaatggacagtagtttaaaa
cttggtgacaaaattcttcccaatagtaagctccaattaaaaaaaattaatgcacgagct
gaatacctgttaaaagtactaaagaaacaaattgataccaaattaggagtgactaaagca
aggaaaccaagaaaggcaaaagaagtgaaatctgcaattacgaaagaaattatagaagaa
aatgacagttcaggtgatgaaagtagtaaagctaaatcaaaagtggaaaagccacccgtg
aagaaagaggaagaggtggttgtcaaaaaagaaactaaagaagaagttgaagatgtccca
gaagagaagaagaaggacaaaaaaactaaaaaggagaagaaagaaaataaaaggactaaa
aagactaaacaagctgctgggccaatgcattttactgctaataacgaaccaagagctctt
gacgttcttggagacctagatccttctatatttaacgagtgcaaagaaaaaatgagaccc
gtaaagaaagcacttaaagctttagacaggcctgatcagtctttaagtgaagcagagcaa
gttgctcatacaaggcagtgccttgtacaaattggaaatcaaattaatacctgcctagaa
gaatacagggacccagaacaaattaaagagtggagaagtaatttatggtactttgtgtca
aagttcacagaatttgatgcaaaaaaactttataagttatataaacatgcgactaagaag
ggtggtgacggtagtatgagtgctacatccagtccagaaaaaaaggaagaatctagtaac
cctaagaagcatactgacaaaacatatgacaaacatatcgataaaccgcaagtagatact
aataaagaaagatcacaaaaacgtagagtcgaagatatggaggaaacatctaatagtagc
acgccaagtaagaaacacttctcagccatttctgctgtaagcagtatcagcaatacgtct
acggttactattggtgctatcactattactcctattacatcgactccaaattctacatca
agtaccactaatagtacggacacgccgcgacataaagaaaaagagtcgaaacacaacaag
gatgtaaaaagagatagggatcgcgacagagatagagacagagcacatggtgataggagt
atggatagaatgagtggaggaaaagacgagaggatcagacgagatagcggtggttatagc
ataagtggtcactatagtggtagcagagaagatgatcattggctgtcgcgtgatggaaga
gatatgagagatggaagatttggagatcacaaacgtgatcgcttcgattcttacggacga
atgtccagtggatatcaccgtgacagagacagagatcgtgatcgaaacatgcacatgaat
gataaaagaagtgattattacagatatccgtcaggaccgccaagttatggatatggccca
ggaggatatggcggtggtggtggtggtggctaccctccttcagatattcccccaagccac
tttagagggcgaggttatcccggagacgggtatcctagcgactggcgatcaaacaaagat
tatagacgggactatgatagaagacctcctccaccaaatgccaactcctag
DBGET
integrated database retrieval system
