Nomia melanderi (Alkali bee): 116428540
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Entry
116428540 CDS
T07404
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
nmea
Nomia melanderi (Alkali bee)
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nmea03041
]
116428540
Enzymes [BR:
nmea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116428540
Spliceosome [BR:
nmea03041
]
Complex C
Other components
Complex C specific factors
116428540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
CDP-OH_P_transf
DEAD
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
116428540
NCBI-ProteinID:
XP_031836152
LinkDB
All DBs
Position
Unknown
AA seq
942 aa
AA seq
DB search
MFGTTTIVSRSFLVILILLTLYFLGMDLLLYSRIQNYNIRPMSNGTQYVSIVPCDINPLC
TVTVKGLMLDYPNYFLLSPLAAVMDNLLQISNSWTWITPNAISCFHVLIAVIAGKCISSD
SLSHRRLGVVLFQARTWLDDLDGHVARKRANIYGERSDVGSSGYIVDGICDALGCVALLI
GLYQFLARNSSRRGGYDKLPQLPVSSVLEPGNVTSKTSNTALRNILLMTVHLFLTSATWN
RYISLYQDLLETDYRTPSITKEHLYAKQTTIFRSLSFWIIVLCWKFINFHAVMDYVLLAI
FFDRIREYMKLVRWSSYVVILLLVYVTEFHFLRAYAYVQGYLLEAGWCADGKMIGVTEPR
RVAATSLANRVADERNCVLGTEVGYSIRFDNCTDETTRIKYMTEGILLRELMGDPLLTNY
SVIVIDEVHERTLMTDIIMGLLKKIIRKRRSLKIVVCSATVDAEQLRDFFNTNTTKDSIK
DTAVILTVEGRLYPVDILFVKEPVANYVTSVVDTVLKIHENEEPGDILAFLTGLDEVDQA
VSLLSEHAKLIQEGKLKLLPLAMYGSLPNSEQLKVFWRAAKDTRKVVVATNIAETSITIP
NIVYVIDCGFVKIPWFEAETQTNSVVIVPVSKASANQRAGRAGRVRTGKTYRLYTEEAYA
ELFEATPPEMQRSDLAPAILQLKALGIDNVLRFNFPSAPPSKNLLAGLELLYALGAIDRN
GELTMSLGITMAEMPLEPVLAKSLIVSGEMGCSEEFTMILAMLQVQNIFIRPAGGQVAIK
ARVAHRKFEVEEGDLLTFLNVYTAYEKNKTSSWCQKNFLNYKALRRATEIRTQMHSMMKR
LKIPLVSSNGNVQQILKCITAGLFPKAAYLHYTGVYKTVRGNRDLYIHPNSCLYTLQQPQ
WVLFCEILQTNKTYMKDITVIQPEWLLELAPHFYEKTSLEPV
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtacaacaactatagtaagcaggtcgttcctagtaattttgatattattgaca
ttgtacttccttggaatggatcttttgttatattctagaatacaaaattataatataagg
ccaatgtcaaatggtacacaatatgtttcaatcgtaccttgtgatattaatccactgtgt
acagtgacagtaaaaggattaatgttagattatccaaattattttcttctgagtcccctt
gcggccgttatggacaatctattacagataagcaattcttggacatggatcacgccaaat
gcaatcagttgttttcacgtgttaatagcagtgatagctggcaaatgtatttccagcgac
tcattatcccatagacgcttaggtgtggtgctttttcaagcaagaacatggttagacgat
ctagatggacacgttgccagaaaacgagcgaatatttatggtgaacgttcggatgttggt
tcatctggttatatcgtcgatggtatctgtgacgctttgggttgcgtggcgttattaatt
ggcctatatcaatttcttgcccgtaattcgagcagacgtggaggatacgataagctgcca
caactacccgtctcttcggttcttgaacctggaaatgtaacatcaaaaacttcaaataca
gcgcttcgtaatatattacttatgaccgtccatttgttcctgactagtgccacctggaat
cgatatatatctttataccaggatctccttgagactgattatagaacaccgtcaattacc
aaagaacatctttatgccaaacagacaaccatatttagaagcttgtcattttggataata
gttctttgttggaagtttattaattttcatgctgtcatggattacgtgcttttggcaata
ttttttgatcgtataagagaatatatgaaacttgtaaggtggtcttcgtatgtagttatt
ttgctgcttgtttatgtaaccgaatttcattttctacgggcctacgcatatgtacaaggt
tatcttcttgaagcaggatggtgtgcagacggaaaaatgatcggagttaccgaaccaaga
agggttgcggccacttctttggccaatcgagtagccgatgaacggaattgtgtcttaggc
actgaagtcggttattccatacgttttgacaattgcacagacgaaacaacaagaatcaag
tacatgacagaagggattcttctacgtgaattaatgggcgatcccttattgacgaattat
tccgtcatcgtgatagatgaagtacacgagaggacattgatgaccgatatcataatggga
cttttgaaaaagataattcggaaacgcaggagcttgaaaattgtcgtttgctctgctacg
gtcgatgcggaacagctacgagattttttcaatacgaacacgacaaaagactcaatcaaa
gatactgcagttatattgactgtcgagggtcgactctaccctgtagatattttgtttgtg
aaagagccagtggcaaattacgttaccagcgtcgtagacacggttttgaagatacacgag
aacgaggaacccggtgatatattagcgtttctcacaggcctggacgaagtggaccaagca
gtttcccttttatcggaacacgcgaaacttatacaagaaggcaaactgaaacttttaccc
ctggctatgtatggatcccttccaaactcagaacaactgaaagtattttggagagcagcc
aaagacactcgtaaagtagtcgtagcaacgaacatagctgaaacatccatcaccattcca
aacatcgtttatgtaattgattgcggttttgtaaaaattccatggtttgaggcggaaaca
caaaccaattccgtggtaattgtccccgtatcgaaagcttctgcaaaccaacgtgccggt
agagcaggtcgtgttcgaacagggaaaacttatagattatacacggaagaagcatatgct
gaactgtttgaagcgacgccgccggaaatgcagcgttctgacttagcaccagctatctta
caattgaaagcattaggcattgataatgtattaagatttaattttccctctgctccaccg
agcaaaaatcttcttgcaggattagaattgctttatgcattgggtgcaatagatagaaat
ggagagttaacaatgtcattaggtatcacaatggcagagatgccattagaacctgtttta
gcaaaatcccttatagtatcaggtgaaatgggatgttccgaagaatttacaatgattctc
gccatgcttcaagtacaaaatatttttataaggccagctggaggtcaggtagccataaag
gctagagttgctcacagaaaattcgaagttgaagaaggagatcttttaacttttttaaat
gtatataccgcttatgagaaaaataaaacgtctagctggtgtcagaaaaattttcttaat
tacaaagcattgcgacgggctactgaaattcggactcaaatgcactctatgatgaaaagg
ttaaaaattccattggtttccagcaacggaaacgttcaacaaattttaaagtgtataaca
gctggactttttccaaaagcagcatatttacattacactggagtatataagactgtacgc
ggaaatagagacttatatatacacccaaatagttgtttatatacacttcagcaaccacaa
tgggtactcttctgtgaaattttgcaaactaataaaacatacatgaaggacataactgtg
atacaaccagaatggttattggaattagctcctcatttttatgaaaagacatcgcttgaa
cctgtttag
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