KEGG   Nomia melanderi (Alkali bee): 116428663
Entry
116428663         CDS       T07404                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
nmea  Nomia melanderi (Alkali bee)
Brite
KEGG Orthology (KO) [BR:nmea00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:nmea03041]
    116428663
Spliceosome [BR:nmea03041]
 Complex B
  Other components
   Complex B specific factors
    116428663
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd WDR55 WD40_MABP1-WDR62_2nd Beta-prop_EML EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st LisH_TPL WDR90_beta-prop_4th Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_TEP1_C Beta-prop_Nup120_160 Beta-prop_DCAF4 WD40_MABP1-WDR62_1st Ge1_WD40 Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_IFT122_1st Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 WD40_RFWD3 Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_DCAF12 Beta-prop_IP5PC_F WD_LRWD1 VPS8_N PROPPIN WD40_like LisH_WDR26 zf_topless
Other DBs
NCBI-GeneID: 116428663
NCBI-ProteinID: XP_031836456
LinkDB
Position
Unknown
AA seq 510 aa
MSIEIESADVIRLIQQYLKESNLVKTLQTLQEETGVSLNTVDSVDGFVADINNGHWDTVL
KAIQSLKLPDKKLIDLYEQVVLELIELRELGAARSLLRQTDPMIMMKQQEPERYIHLENL
LARSYFDPREAYPDGSTKEKRRAYIATALAGEVSVVPSSRLLALLGQALKWQQHQGLLPP
GTTIDLFRGKAAVRDQEEEKYPTQLSKQIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMEQAVLSMSFSRDSEMLAGGGQDGKIKVWRVQSGQCLR
RFEKAHSKGVTCLQFSRDNSQILSASFDTTIRIHGLKSGKTLKEFRGHSSFVNEVVFAPD
GHGIISASSDGTVKIWSLKTTECIGTYKSLGAADLTVNSIHLLPRNPEHFVVCNRSNTVV
IMNMQGQIVRSFSSGKREGGDFVCTVVSPRGEFIYCVGEDLVLYCFSTSSGKLERTLNIH
EKDVIGLTHHPHQNLLCSYSEDGLLKLWKP
NT seq 1533 nt   +upstreamnt  +downstreamnt
atgtcgattgaaattgagtccgctgatgtaattcgtttaatacaacagtaccttaaagaa
tctaatcttgtcaaaacattacaaacactacaggaagaaactggtgtgtcgttgaataca
gtggatagtgtagatggttttgtagcagatataaataatggacattgggatacagtatta
aaagcgatacagtctttaaaattgccagacaaaaaacttattgacttatatgaacaggtt
gtcttagaattaattgagctacgagagctaggtgcagccagatcattgttacgtcaaaca
gatccaatgattatgatgaaacaacaagaacctgaacgatatatccatttagaaaattta
cttgcccgctcatattttgatccacgtgaagcataccctgacggcagtacaaaggaaaaa
cgaagagcttacatcgctacagcacttgctggtgaagtatctgtagtaccttcgagtaga
ttactcgcattattaggacaagcgttaaaatggcagcaacatcagggtttacttccacct
ggtactacaatagatttgttcagaggaaaagcagctgtacgagatcaggaagaagaaaaa
tatcctacacaactttccaaacaaattaaatttggacaaaaatctcatgtagaatgtgca
cgcttttcaccagatggtcaatatttagttactggttccgttgatggatttattgaagtc
tggaatttcacaactggcaaaattaggaaagatttaaaatatcaagcacaagataatttc
atgatgatggaacaagcagtattatcaatgtcttttagtcgtgatagtgaaatgttggct
ggcggtgggcaagacggaaaaataaaagtatggagagtgcaaagtggacagtgtttaaga
agatttgaaaaagctcactcaaaaggtgttacatgtcttcaatttagtagggataatagt
caaattttatctgcatcgtttgatactactataaggatacatggtcttaaatccggaaaa
acgttaaaagaatttcgaggacattcatcttttgtgaatgaggttgtctttgcaccagat
ggacatggtataataagtgcatcatcagatggaactgtaaaaatttggagtttaaaaaca
acggaatgtataggcacgtacaaatctttaggtgctgcagacttaactgttaatagtata
caccttttacctcgaaatcctgaacattttgtcgtgtgtaatcgctcaaatacagtagtt
attatgaacatgcaaggccaaattgtaagatcattctctagtggtaaaagagagggaggt
gactttgtgtgtacagttgtaagtccacgtggtgaatttatttattgtgttggtgaagac
cttgtactttattgtttctctacgtcttcaggaaaacttgaaagaactctcaatatacat
gaaaaggatgtaattggtttaacacatcatcctcatcaaaatcttttatgttcttatagc
gaagatggtcttttaaaattgtggaaaccttaa

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