Nomia melanderi (Alkali bee): 116428792
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Entry
116428792 CDS
T07404
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea04120
Ubiquitin mediated proteolysis
nmea04137
Mitophagy - animal
nmea04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
116428792
04120 Ubiquitin mediated proteolysis
116428792
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
116428792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nmea04131
]
116428792
04121 Ubiquitin system [BR:
nmea04121
]
116428792
03029 Mitochondrial biogenesis [BR:
nmea03029
]
116428792
Enzymes [BR:
nmea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
116428792
Membrane trafficking [BR:
nmea04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
116428792
Aggrephagy
Other aggrephagy associated proteins
116428792
Xenophagy
Other xenophagy associated proteins
116428792
Ubiquitin system [BR:
nmea04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
116428792
Mitochondrial biogenesis [BR:
nmea03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
116428792
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
IBR_2
zf-RING_12
ubiquitin
IBR_1
IBR
Rad60-SLD
Rcat_RNF216
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
116428792
NCBI-ProteinID:
XP_031836769
LinkDB
All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MNIVFDFIRNVLLSMLQLIWFGKRRISNSLSIYVKTNTGNTLAVDLDPKWDIKNVKEIVA
PQMGTSPRDIKIIFAGKELHDSTIIEECDLGQQSILHAIRTPHQRLNRSKDTSTINESSE
TSEFNDSGGKPLNETLSDLPLDDSDLQENSPKEEYQESRAHFFVFCSSPCKAVTTGKLRV
KCATCNSGAVTVDRDPQSWPDVLSPRRITVHCENDLCPAPTTISDDIETQVLYAHFYFKC
ANHASLGEQDEAVPLYLVKPNLRKIPCLACTDIRDTVLVFPCEAGHVTCLDCFKDYCSVR
LRERQFQFDEAKGYYTLPCPAGCPDSLIPEVHHFHLLTPEQYEQYQRFSTEEYVLRVGGL
LCPRPDCGMGIIPATEDDGSDNEECRKIQCIGGCGYVFCRRCLQGFHVGECESQPYASSN
ATQNSGGYSVDPQRAKDAKWDEASKKTIQISTKPCPKCRTPTERDGGCMHMVCTRAGCGY
HWCWVCQTQWTRECMGNHWFG
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgaacattgttttcgacttcataaggaatgtgcttttgagcatgttacagttaatttgg
ttcggaaagcgtagaatatccaattcactcagtatatatgtgaaaacgaatactgggaat
actcttgctgttgatctagatccaaaatgggatataaagaacgtgaaagaaatagtggcc
cctcaaatgggtacatcacccagagacataaagattatatttgcagggaaagagctgcac
gactcaacaataatagaagaatgcgatttagggcaacagagtattttacatgctattcgt
actccacatcaacgattgaacagaagtaaagatacaagtactatcaacgaatcttcagaa
acatctgaattcaatgatagtggtggaaaaccattgaatgaaactttaagtgatttacct
ctagatgattcagatctccaagagaattcacctaaggaagaatatcaggagagtcgagca
catttctttgtattttgttcaagtccttgtaaagcagtcacaacaggaaaattgagagtg
aaatgtgctacctgtaatagcggagctgttactgtagatagagaccctcagagttggcct
gatgtactctcgccacgaagaataacagttcactgtgaaaacgacttatgtcctgcacct
acaacaatttctgatgatattgaaactcaagttttatatgcgcatttttattttaaatgt
gcaaaccatgctagccttggagaacaagatgaagcagttccactctaccttgtaaaacca
aacttaagaaaaattccttgcttagcatgtacagacattagagatacagtattggtcttt
ccatgtgaggcagggcatgtaacttgtcttgattgcttcaaagattattgttcagttcgc
ttaagagaacgtcagttccaatttgatgaggctaaaggatattatacacttccatgtcca
gcaggatgcccagattcacttattcctgaagttcatcattttcacctacttactccggaa
cagtacgaacagtatcagagatttagtacagaagaatatgttttacgtgttggtggtctt
ctttgtccaagaccagattgtgggatgggaattataccagctacagaggatgatggtagt
gataatgaagaatgtaggaaaatacagtgcattggaggctgtgggtatgttttctgcaga
agatgtttacaagggttccatgtaggggaatgtgaatcacagccatatgcatcttctaat
gcaacacaaaattctggtggatattctgtggacccacaaagagctaaagatgcaaaatgg
gatgaagccagcaaaaagactatacagatatcaacaaaaccatgtccaaaatgcaggaca
ccaactgaaagagatggaggatgtatgcatatggtttgtacaagagctggctgtggatat
cactggtgttgggtttgtcaaacacagtggacaagagagtgtatgggtaatcattggttt
ggttaa
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