Nomia melanderi (Alkali bee): 116428999
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Entry
116428999 CDS
T07404
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116428999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nmea03041
]
116428999
Enzymes [BR:
nmea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116428999
Spliceosome [BR:
nmea03041
]
Complex A
U2 snRNP components
U2 related factors
116428999
Complex B
116428999
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
116428999
NCBI-ProteinID:
XP_031837190
LinkDB
All DBs
Position
Unknown
AA seq
1033 aa
AA seq
DB search
MVRSSDKDRHHRRRSRSRSRSRSATPEKKRRRSRSRDRDRDRDKGRHRERRSRSRDRDRD
RSDRRERSERDRDRDRKRGDSKEKRLTGSKSSRSGKDRSNRSRSRERKEKEKGDSDELPF
DHTKLDKEEEQKRLELEMQKRRERIERWRAERKKKELEATKKDGKASILANLQLPMKKWS
LEDDSDEETPVVQNSNKEVKEEGDTKEEVEEVKEETKDDDEEVDPLDAFMAEVQEEVRKV
NKLDNKGAKSTNNGTGTGGTQSGGVVIVTGVAKKKVQKQKGELIEQNQDGLEYSSEEEGE
NLHETAAGIANKQKRELAKVDHATTEYQPFRKSFYVEVPEIARMTPEEVEAYKEELEGIR
VKGKGCPKPIKSWAQCGVTKKELEVLKKLGYEKPTPIQCQAIPAIMSGRDLIGIAKTGSG
KTLAFLLPMFRHILDQTPLADGDGPIALIMTPTRELCMQIGRDSKKFTKSLGLSHVCVYG
GTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEP
QVMRIMENVRPDRQTVLFSATFPRQMEALARRILTRPVEVQVGGRSIVCKDVEQHVVVLE
EDQKFYKLLEILGHYQDKGSAIIFVDKQENADTLLKDLMKASYSCMSLHGGIDQCDRDST
ILDFKAGRMKLLVATSVAARGLDVKHLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAYT
FITPEQERYAGDILRAHELAGVPVPEPLRQLWEGYKARQAADGKKVHTGGGFSGKGFKFD
ESEAALANEKKKFQKAALGLQDSDDEDIENDIDQQIESMLAPKRTVREIARPSATNIAVP
GQPVPSATDKLELARRLASKINIAKNLGAEAKGATQQAAEAILKGAGPTNLITAKTVAEQ
LAAKLNTKLNYQPREEDLVESDAEAGEQTFRKYEEELEINDFPQQARWRVTSKEALAQIS
EYSEAGLTVRGTYIAPGKAPPEGERKLYLAIESTSELAVSKAKAEVSRLIKEELIKLQAS
GAHTASRSRYKVL
NT seq
3102 nt
NT seq
+upstream
nt +downstream
nt
atggttcggagtagcgacaaggacagacatcacaggcgacggtcgagatcgaggtcgaga
tctcggtcagccacgccggaaaaaaaacgacgacgatctaggagcagggacagggacagg
gacagagataaggggcgacatagagaaagaagaagtcgttctagagacagagacagagat
aggagtgatagaagggaacgttctgaaagggatagagaccgtgacaggaaacgtggagac
agtaaagaaaagcgtcttacaggatcaaagtcttcacgttcaggcaaagatcggtctaat
cgttcaagatccagagaacgcaaggagaaggagaagggtgacagtgatgaattgccattt
gatcatacgaaactagataaggaagaagaacagaaaagattagaattggaaatgcaaaag
agaagagaaagaatagaaaggtggcgggcagaaagaaagaagaaagagctggaggcaact
aaaaaagacggtaaggcatcaattttagcaaaccttcagctgcctatgaaaaaatggtcc
ctcgaagatgatagtgatgaagagactcctgttgttcagaacagcaacaaggaagttaaa
gaagaaggtgacacgaaagaagaagttgaagaagtcaaagaagaaactaaggatgatgat
gaagaagttgatcctttggatgccttcatggcagaggttcaagaagaagttcggaaggta
aataaacttgacaataaaggtgcaaagagtacaaacaatggtacaggcacgggaggtacc
caaagcgggggcgttgttatagtaactggcgttgccaaaaagaaagtgcagaaacaaaaa
ggagaactgatcgaacagaatcaagatggtttagaatattccagtgaagaagaaggagaa
aatctgcatgaaacagccgctggtatcgcaaacaagcagaaacgggaactagctaaagtt
gatcatgcaacaaccgaataccaaccatttagaaaatcattttatgttgaagtacctgaa
atagcgagaatgacaccggaagaagtggaagcatataaagaagaattagaaggcatccgt
gtgaaaggaaagggttgtcctaaacctattaaatcatgggcacaatgtggtgtgacgaag
aaagaattagaagtcttgaagaaacttggttatgaaaagccaacacccattcagtgccaa
gcaattccggcaattatgtctggtcgcgatctgataggcatagcaaaaaccggaagtgga
aaaacgttagcttttctattaccaatgtttagacacattcttgatcaaacaccattggcc
gatggtgatggcccgatcgcgttaatcatgacacctactagagaactatgtatgcagatt
ggtagagattcgaaaaagtttacgaaatctctgggattatcacatgtatgcgtctatggt
ggaaccggtatatccgaacaaatagcagaattgaagagaggtgccgagataattgtttgt
acacccggaagaatgatcgacatgcttgcagcaaatagtggcagagtgacgaacttacga
agagttacctacgtagtactagatgaggctgacagaatgtttgacatgggttttgaacct
caagtaatgagaatcatggagaacgttcgaccagatcgacaaactgtacttttcagtgca
acattccccagacaaatggaagctttagctagaagaattttaactagacctgtggaagtt
caggttggaggtcgatcaattgtttgcaaggatgttgaacaacacgtggtagttcttgaa
gaggatcagaagttttacaagttgctagaaattcttggtcattatcaagacaagggttcc
gccataatattcgtcgataaacaggagaatgctgacaccttgttgaaagatcttatgaaa
gcttcctactcttgtatgtctcttcatggtggaattgatcaatgcgacagagattctacg
atattggatttcaaagctggtagaatgaaattgttagttgctacttctgttgctgcaagg
ggtttggacgtgaaacatcttgttcttgtggtaaattacgattgtccgaatcattacgaa
gattatgtgcataggtgtggaaggactggaagagctggaaacaagggatacgcgtacacg
tttatcacaccagaacaggagcgttatgcgggcgacattcttcgtgcccacgaattggcc
ggagttcctgtcccagaaccgttacgtcaactttgggaaggctacaaagccagacaagca
gcggatggcaagaaagtacacacaggtggtggtttcagcggtaaaggattcaaattcgac
gaatcagaggcggcactggcgaatgagaaaaagaagttccagaaagcagccttaggtttg
caagattctgacgatgaggatatagaaaatgacatagatcaacagatagaaagcatgcta
gcaccgaagaggactgttcgagagattgccagaccttctgctaccaatattgctgttcct
ggtcaacccgtccccagtgctactgataaattagaacttgctagacgactggcgtccaag
atcaacattgccaagaatttgggcgccgaggcaaagggcgcgacccaacaggctgctgag
gctatccttaaaggagctggtcctactaacctcatcacagcgaagacagtcgcagaacag
ctagctgcgaagttgaataccaagttgaactatcaaccacgagaggaagaccttgtggag
agcgatgcagaggctggtgaacagaccttccgcaaatacgaggaggaattagaaatcaac
gatttcccgcagcaggctaggtggcgagtcaccagcaaggaagctctcgcgcagatctca
gagtattctgaagctggtcttaccgttagaggaacatacatagcacctggcaaggctcca
ccagaaggagaaagaaagttatacttagctatcgagtccactagtgaattagcggtcagc
aaggccaaggcagaggtctcgcgactcatcaaggaagaattgatcaagttacaagcatca
ggcgcgcacactgcctctcgcagccgatataaagttttgtaa
DBGET
integrated database retrieval system
