Nomia melanderi (Alkali bee): 116429059
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Entry
116429059 CDS
T07404
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog isoform X1
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea04140
Autophagy - animal
nmea04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116429059
04148 Efferocytosis
116429059
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nmea04131
]
116429059
Membrane trafficking [BR:
nmea04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
116429059
Hops complex
116429059
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-C3HC4_2
zf-RING_11
zf_RING_Vps8
zf-C3HC4
zf-C3H2C3
zf-RING_2
zf-RING_Vps41
zf-RING_16
zf-RING_UBOX
zf-RING_5
COMP
zf_RING_Vps8_fungal
DUF6236
zf-rbx1
Occludin_ELL
Motif
Other DBs
NCBI-GeneID:
116429059
NCBI-ProteinID:
XP_031837325
LinkDB
All DBs
Position
Unknown
AA seq
995 aa
AA seq
DB search
MTSMFDQYEQASQRSKQVHAPPIRPDISTAGFIQMKLQDDGPIFIKQKVNFQPSDNIVHL
VVNNNIIVIAMANNILLRIDMKNPNVPEEIDISNYSVNMKMSGMFLDPLGNHLLIALVRN
NPKDNLPSELFYLHKKATKLKQANKFKGHEITAVGWNFLNSSETTTGPILLGTAKGLIFE
TEIGIEGDKIFNTSLEQYWRQLPNRLPLYGAKEIEELVFDIGESSKPPITGLEFHKVPNT
DKYMIIVTTLVRIYQYIGEVQNPEEKPLLQQVFNRYLNVQESFNDVISSLPYSKMQCYYP
SVGAIPKSFGWLTETGIWYAQIDPNVEPNNILLNQQMLMCPETSLIGNNTSQVTTAPLSF
VLTEFHALLLYTDRVKGISLLNQELIFEDIYNDAFGKLLNITKDYVTRSIWAYSERAVFK
YKVNKEDRNVWQIYVDKGEFELAKQYCKDNPAHIDQVLVKQAEVLFKNKEYEKSALISAD
THSSFEEISLKFLQEWQIEALKTFLKKKLEGLKAQDKTQITMIVVWVIELFMNQMAALRK
SDPQYLELQKQFDSFFAMPKVAECIKRNRSTIYDLMASHGDKENLIRLTIMHHNYEEVIR
QHLYKNNYLEALEVLKSQNNKDLFYQFSGILLQELPRPTVTALISQGFSLKPSKLLPALV
SCNSDEKHAKEIIRYLEFCVYKLGCQEQAVHNFLLSLYVRYKKDEVMRYISSQGQDINMV
HYDVHYALRLCQEAGLTEACVQLSALLGLWTRAVDLALTISVDLAKQIAAMPTDHDDELR
KKLWLKIAEHVVREKDDIKEAMIFLQNCDLVRIEDILPFFSDFVTIYHFKEAICNSLQEY
NQHIQDLKEEMQEATKAAELIRKDIQEFRTRCTFVHAKDTCDTCDVQLLLRPFYVFPCGH
RFHSDCLVAALTPMLSMDQRTKLADLQRQLTALSNRPEDTTSISSVPLSKKDQIKADIDD
LVASECLYCGELMIESIDKPFIEEEDYERVMKEWA
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaatgtttgatcagtatgaacaagcatctcagcgatcaaaacaagtacatgca
ccaccaattcgtcctgatattagtacagcaggatttattcaaatgaaactgcaagatgat
ggaccgatctttataaagcaaaaagttaattttcaaccatctgataacattgtacattta
gttgttaataataatataattgttattgctatggctaacaacattctcttacgcattgat
atgaaaaatccaaatgtaccagaagagattgatatatctaattattctgtgaacatgaaa
atgtcagggatgtttcttgatcctttgggtaatcatttattaatagctttggttcgaaac
aatcccaaagacaatctaccatctgaattattttatttacataaaaaagcgacaaaatta
aaacaggcaaataagttcaaaggacatgaaattactgctgttggatggaattttttaaat
tcttctgaaaccaccacgggtccaattctcctaggaactgcaaaaggtcttatctttgaa
acagaaattggtatagagggtgataaaatatttaatacaagtttggaacaatattggcgt
cagcttcctaaccgcctacccctttacggtgctaaggagatagaagaattggtattcgat
ataggggaaagtagtaaaccaccaattactggtttggaattccacaaagtaccgaacaca
gacaaatatatgattattgttaccactcttgtacgcatttaccagtatattggagaagtt
caaaacccagaagagaaacctttgttgcaacaagtatttaatagatatttgaatgtacaa
gaaagttttaacgatgtaataagttctttaccctactcgaaaatgcaatgttattaccca
tcagttggagctataccaaagtcatttggttggctaactgaaactggtatatggtatgca
cagatcgatccaaatgtagaaccaaacaatatattattaaatcaacaaatgttaatgtgt
cctgaaacaagtcttataggaaacaatacctcgcaagtaacaactgcaccactgtcattc
gttttaacagaatttcatgcgttattactttatacagatcgtgttaaaggcatatccctt
ttaaatcaggaattgatatttgaagatatttataatgatgcttttggaaaattgcttaac
attacgaaagattatgtaactcgttctatttgggcttatagcgaacgagcagtttttaaa
tataaagttaataaggaagatagaaatgtttggcagatatatgttgacaaaggtgaattt
gaactcgctaaacaatattgtaaagataatccagcacatatagatcaagtattagtgaaa
caagcagaagtgctttttaaaaataaagaatacgaaaagagtgctctcatttccgcggat
actcattcatcatttgaagaaatatctttgaaatttcttcaagaatggcaaatagaggca
ttaaaaacatttctaaaaaagaaactcgaaggattgaaagcacaagataaaacacaaata
actatgattgttgtgtgggtaattgaattatttatgaatcaaatggctgcattacggaaa
agtgatccgcaatacttggaacttcagaagcaatttgatagctttttcgctatgccgaaa
gtcgcggaatgtataaaaagaaatcgcagtactatatatgatttaatggcaagtcacggc
gataaagaaaatcttatccgtttaactataatgcatcacaattatgaagaagtgatacgt
cagcatttatacaaaaacaattatttagaagcacttgaagttttaaaaagtcaaaataat
aaagatcttttttatcagttttctggtattcttttgcaagaattaccacgtcctacggta
actgctttgatatcgcaagggttttcattaaaaccatctaaactccttccagctttagtc
tcttgcaatagcgacgaaaaacatgcgaaagaaataattaggtatctggagttttgcgta
tataaactaggctgtcaggaacaggcagttcacaatttcttattgtcactgtatgttcgt
tataaaaaagatgaagttatgcgttatattagttctcaaggacaagatataaacatggta
cattatgatgttcactatgcattacgtttatgccaagaagctggtttaaccgaagcttgt
gtacaattgtccgctttgctgggactctggacaagagcagtagacttagctttgacgatt
agcgttgatcttgcaaaacaaatagctgccatgcctactgatcacgacgatgaattaaga
aaaaaattgtggttaaaaatcgctgaacacgtggttcgcgagaaagatgatataaaagaa
gcaatgatatttttacaaaattgtgatttagtcagaatagaagatatattaccattcttt
tcggactttgttactatatatcactttaaagaagctatttgtaactcattgcaggaatat
aatcagcatatccaagatctcaaagaagaaatgcaagaagcaacgaaagcagctgaactt
atcaggaaggatatacaggaatttagaacaaggtgtacatttgtacatgcaaaggacaca
tgtgacacttgtgatgttcagttgctgttgcgacctttttatgtattcccatgtggacat
agatttcatagtgattgcctggtagctgcactgacacctatgctatcaatggatcaaaga
acaaagttagctgatcttcaacgacaacttactgctctttcaaatagacctgaagatact
acctcaattagctctgtacctttatcaaagaaagatcaaattaaggctgatattgatgat
ttagtggcatctgaatgtttatactgtggagaacttatgatagagtccatagataagcca
ttcattgaagaggaagattatgaaagagtaatgaaagaatgggcataa
DBGET
integrated database retrieval system
