Nomia melanderi (Alkali bee): 116429066
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Entry
116429066 CDS
T07404
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116429066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nmea03041
]
116429066
03009 Ribosome biogenesis [BR:
nmea03009
]
116429066
Enzymes [BR:
nmea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116429066
Spliceosome [BR:
nmea03041
]
Complex A
U1 snRNP components
U1 related factors
116429066
Complex B
116429066
Ribosome biogenesis [BR:
nmea03009
]
Eukaryotic type
Pre-60S particles
Helicases
116429066
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
PRAI
Motif
Other DBs
NCBI-GeneID:
116429066
NCBI-ProteinID:
XP_031837354
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MAYRDRERGDRRGGGARGGGRFGGRDGSGGGSRFGSSSNRDGNSFGNFKNRQPGERLRKP
RWDMATLQPFRKDFYQPHPNVTTRSPHVVEAYRSDKEITVKGTNVPGPNIFFEEGGFPDY
VLNEIRRQGFGEPTAIQAQGWPIALSGRDMVGIAQTGSGKTLAYILPAIVHINHQPRLNR
NDGPIALILAPTRELAQQIQQVASDFGISSQVRNTCIFGGAPKGPQARDLERGVEICIAT
PGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPK
EVRNLAEEFLTDYIQINIGSLQLAANHNILQIVDVCEEYEKEGKLMKLLEEISNEPENKT
IIFVETKRKVDDITRAINRYGWQAIGIHGDKSQQERDYVLNQFRNSRSAILVATDVAARG
LDVEDVKFVINLDYPSNSEDYVHRIGRTGRSQRTGTAYAFFTPGNAHKASDLIQVLEEAK
QVVNPKLYELSRNPGIYKRGRYGGRSGGGSGRGSGGRGGGPRGSRGGRDGGDRAGRFDRS
SGGGGGGGDRGKWNGNTSSMASNKNCGIGGGNYSSKVFSQNSYGGLSSGGSSGYQNGSGY
GGSGGGGGSNYRQQNGY
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcttatcgtgatcgtgaacgtggtgatagaagaggaggcggagcacgtggagggggc
cgttttggtggtcgagatggaagtggtgggggtagtagatttggtagcagttcaaataga
gatggtaatagctttggtaacttcaaaaatcgacaacctggtgaacgtctacgaaaacca
agatgggacatggccacattgcaaccatttaggaaagacttttatcagcctcatcctaat
gttacaactcgaagtccacatgtagttgaggcttatcgttcagataaagagattactgta
aaaggtacaaatgtaccaggaccgaacatattctttgaagaaggcggatttccagattac
gttttgaatgaaatccgtagacaaggatttggggaaccaactgcaatacaagcacaaggc
tggcccattgctttatctggacgcgatatggttggaattgcacaaacaggatctggaaaa
acattagcatatattttaccagcaattgtacatataaatcatcaacctagattgaacaga
aacgatggacctatagctcttattttagcacctacacgagaacttgcacaacagattcag
caagttgcctcagattttgggatttcatcgcaagtaagaaatacttgtatttttggtgga
gctccgaaaggtcctcaagctcgtgaccttgaacgtggtgttgaaatctgtatagcaaca
cctggccgtcttatcgattttctagaacgtggtacaacaaatttacgtaggtgtacatac
ttagtactagacgaagctgatagaatgcttgacatgggctttgagccacaaattaggaaa
attgttgaacaaatccgacctgatcgacaaaccctaatgtggtctgcaacatggccaaag
gaggttcggaatctcgcagaagaatttttaaccgattacatacaaattaatattggctct
ttacaactggcagctaatcacaacatccttcaaattgttgatgtatgtgaagaatatgaa
aaagagggtaaacttatgaaattgttagaagaaatttcaaacgagccagaaaataagaca
attatttttgttgaaactaaaagaaaagtggacgatataacacgcgcaattaatagatat
ggatggcaagcgattggcatccatggagataagagtcaacaggaaagagactatgtatta
aatcaattccggaatagcagatctgccatactagtagctacagatgttgcagcaagagga
ttagatgtggaagatgttaagtttgtgataaatttggactacccgtccaattctgaagac
tatgtacaccgtattggacgtacaggacggtcacagcgtacaggaactgcgtacgcattt
ttcacgccaggaaacgcacataaggctagtgacttaattcaagtcttagaagaagcaaaa
caagtcgtaaaccctaaactttatgagctatcaagaaacccaggaatttataagagagga
cgttatggaggacgtagcggaggtggcagtggtcgcggttccggaggccgtggaggtggt
cctcgaggatcgcgtggcggtcgtgatggtggagatagggctggcagatttgatcgctct
agcggtggcggtggtgggggcggagatagaggaaaatggaatggaaatactagcagtatg
gcttcaaacaagaattgtggtataggagggggcaattacagtagtaaagtattttctcaa
aatagttatggtggactttctagtggcggttctagcggttatcaaaatggcagtggatat
ggaggaagtggaggtggaggtggaagtaattataggcaacaaaatggttattaa
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