Nomia melanderi (Alkali bee): 116429893
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Entry
116429893 CDS
T07404
Name
(RefSeq) uncharacterized protein LOC116429893 isoform X1
KO
K10484
structure-specific endonuclease subunit SLX4 (BTB/POZ domain-containing protein 12)
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116429893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nmea04121
]
116429893
03400 DNA repair and recombination proteins [BR:
nmea03400
]
116429893
Ubiquitin system [BR:
nmea04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
116429893
DNA repair and recombination proteins [BR:
nmea03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
116429893
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Slx4
BTB
Motif
Other DBs
NCBI-GeneID:
116429893
NCBI-ProteinID:
XP_031839233
LinkDB
All DBs
Position
Unknown
AA seq
1354 aa
AA seq
DB search
MDEKMQSNKYTVSIETEGDSILDFKSPEFAKPNIKLRKKEKLKNVRKNQKDMKFKHSDKR
KKLQESQPSIESSFFKPKKDNDDKDQTDDVKVALLCPLCLKIFKDVDSQAVHMKVCACKN
NISTKKLLDAIELQKRQEDERKSLGLLAAPVIQEKKKPVSRKTNLDNDSDLQLALALSKS
LQEAEVLEEVNEIEQLSEVPNKTTLEITESISKCQLEKFGFANNKSATLTRNRKRKFNEI
TVLQTRTQEERNRILTEKIAEILMGDEPFTQELKVYNEKNTAKSILKSHLLQQLCYKDEK
LWNKAGLSSNQISFYVSNLSEYIFPQTKQIKEDECKEGDKDLCQNKTEGNANKEIFYEVS
QSDLHLPNEECENLDGEQYIDTSATNWRNALNDSSASDIIIFVNNNRYIWAHKLVFYVQC
SNILLDVMPNDNSQFATIKEKIFWPDITYNVALAFLEFIYCGNIKKYCDVFQDIPSYSIL
RNLARKYKVKELFPYLQRKEIETKQIRVQTKDTKNMELDKTLIVKEIDNLEEPLNISKVF
TCENKEELILHEGEVLNENVCKEQRNQRVVSLSQMSPIRHCNESPDMFDDVNESILNYNE
KSISHTVNFSEKQKYNHVDTVNSVNLTTIDTDSNKIEDSVLFKNIEGNINSLSNTPQSSR
SKRWSVNHTNFKKTKSNLSLFIENFQMENARSDCDTDSEIMVIPVSPKFKRNPFNIENNN
SYQDSLSNEINMAKGKTENKRDILNKFDCSTSSHSHVQTIPKGTDTDVNLTFESMDNLTE
LLENNKDSSVENSVKNDSINRNITNTNDVVQSCVESPVTETALKDKISDESLNNDITKCN
ESDSSNESDVYSNNAEESIYTKYRKGHQNNSIAKYRDFIKEYVLKSSVENSSEDDYSERE
INVETEDITILSDEDIGCDFTAISEKKKKIVSDLEKFDQSSFESPTNFSKTLDNSIKHQR
NTKLHNASKLRSTKSESSIDVKAIKDNLSVSSPDRKVNQMNLMESPVLILSSPEIDFDVS
NVGTSKIKVNNDISNPKEFDDYTRIFEKDIYLANVYINNDPADVSKIKGTSLVEPNKKNY
ERTTTDNNSMTQVEKSLSTQQSIRKFQRKSVSEMSLNINTKSTKNNALQSIVNVDQSLCK
CGNKQVSRNIKSPTTLIRDSTTPPPDYDGMKTPELHAELHKYGLKLQKRSRAVKLLTYIY
NELHPVIPLTSKKTVSEYVVVNSDDEEPPMKRKNYSKNDNDCNNDYIYELVSSKGGADKS
AANIINEERKFDEFETVTTNTALNIKDEFYKLIEDQKELHNNILTYEPLCIESLHSMLKE
KGFKCKMNTLMDFLDEQCITFYFQDMKKGRNWKK
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaaaaatgcagagtaataaatatactgtttccattgaaactgaaggtgatagt
atactagatttcaaaagcccagaatttgctaagcctaatataaaactgaggaagaaagag
aaattaaaaaatgttagaaagaaccagaaagatatgaaatttaaacattcagacaaaaga
aaaaaattacaagagtctcagccttctatagaatcttctttttttaaacccaaaaaggat
aatgatgacaaagatcaaactgatgatgtaaaagtggctcttttatgtcccctatgtttg
aaaatcttcaaagatgtggattctcaagcagtacacatgaaagtttgtgcatgcaaaaat
aatatttctacgaaaaagttattagatgcgatagaacttcaaaagcgtcaagaggatgaa
agaaaatcattaggtttacttgccgcaccagtaatacaagagaagaagaaaccagtatcc
cgtaaaacaaatttggacaatgattctgatcttcaacttgcattagcattatcaaagtct
cttcaagaagcagaagtattagaggaagttaatgaaattgaacaattatccgaggtacca
aataaaactacacttgaaataacagaatctatcagtaaatgtcaattggaaaagtttgga
tttgcaaataacaaatctgcaactcttacaaggaatagaaaaaggaagtttaatgaaata
actgttctacaaacacgtactcaagaagaaagaaaccgcattttaacagaaaaaattgct
gaaattctcatgggtgatgaaccatttactcaagaattaaaagtatataatgaaaaaaat
acagcaaaatctattctgaaaagtcatttacttcaacaattgtgttataaggatgaaaaa
ttatggaataaagctggattatcttcaaaccaaatatccttttacgtatcaaacttatca
gaatatatatttccacaaaccaaacaaataaaagaagatgaatgcaaggaaggtgataaa
gatttgtgtcagaataaaacagaaggaaacgcgaataaggaaatattttatgaagtatca
caaagtgatttacatttgccaaatgaagaatgtgaaaatttagatggtgaacaatacatt
gatacctcagcaacaaattggagaaatgcattgaatgacagttctgcaagtgatataata
atatttgttaataataatagatatatttgggcacataaattagttttttatgtacagtgc
tctaacatactattggatgtcatgcccaatgataattcacaatttgctacaatcaaggaa
aaaatattttggcctgatataacttataatgttgctttagcatttctagagtttatatac
tgtggtaacataaagaaatactgtgatgtttttcaagacataccaagctattctatttta
agaaatttggcaagaaagtataaggtgaaagaattatttccatatttacaaagaaaagag
attgaaactaaacaaataagggttcaaacaaaagacactaaaaatatggaacttgacaaa
acactaatcgtgaaagaaatagataacttggaagaacccttaaatatatcaaaggttttc
acttgcgagaacaaggaagaattaatattacatgaaggtgaagtattaaatgaaaatgtg
tgtaaagaacaaagaaatcagagagtcgtttctttaagtcaaatgagtccaataaggcac
tgtaatgaatctcctgatatgtttgatgatgttaatgaatccatactaaattacaatgaa
aaatctattagccatacggtaaattttagcgaaaaacagaagtataaccatgttgataca
gtcaactcagttaatctaacaacaattgatactgattcgaataagattgaggactctgtt
ttatttaaaaatattgaaggaaatataaattctttgtcgaatacgccacagtctagtaga
tcaaaaaggtggagtgtaaaccatactaattttaaaaaaaccaaaagtaatttgagctta
tttattgaaaattttcaaatggagaatgcaagatcagattgtgatacagattctgagatt
atggtaataccagtatcaccaaaattcaaaagaaatccatttaatatagaaaataataat
tcttatcaggattcattgtctaatgaaattaacatggcgaaaggaaaaacagaaaacaaa
agagatattctgaataagtttgattgcagtaccagttcccactcgcatgtacagactata
cctaaaggaactgatactgatgtaaacttgacttttgagtcaatggacaatttaacggaa
ttattagaaaataataaggatagtagcgtagaaaattctgtgaagaatgattcaataaat
agaaatataactaatacgaacgatgtggttcaaagctgtgtagaatctcctgtaacagaa
acagctctaaaggacaaaataagtgatgagagtttaaacaatgatatcacaaaatgtaat
gaaagtgatagtagtaatgaatcagatgtttattcaaataatgctgaagagtctatatat
acaaaatacagaaaaggacatcaaaataatagtatagcaaaatacagagattttattaaa
gaatatgtactaaagagttctgtggaaaatagctcggaggatgactatagtgaaagagaa
attaacgtagaaacagaagatattactatattatcagatgaagatatcggttgtgacttt
acagcaatttcagagaaaaagaaaaaaatagtttctgacctcgaaaagtttgatcaatca
tcttttgaaagtcctacaaatttcagtaagacactcgataacagtattaaacaccaacga
aacacaaaattgcataatgcaagcaaattaagatccactaagtcggaaagtagcatcgat
gtaaaagcaataaaagataatttgtcggtatcatcaccagatcgaaaagtaaatcaaatg
aatttaatggaatctcctgttttgatattgtctagcccagaaattgattttgatgtttca
aatgtaggtacaagtaaaatcaaagtaaacaatgatatttcgaatccaaaagaatttgat
gattatactcgtattttcgagaaagatatttatttagcaaacgtttacattaataatgat
ccggccgatgttagtaagattaaaggaacttcgctggtcgaaccgaataagaaaaattat
gaacgaactacaactgacaacaatagcatgacacaggtagagaaatctttatccacacaa
caaagtataagaaaatttcaaagaaaatctgtgtcggaaatgagtttaaatattaataca
aaaagtacaaaaaataatgcattgcagtctatcgttaatgtagaccagtctttatgtaaa
tgtggtaataaacaagtctcaaggaatattaaatctcctacaacacttattagagacagt
actacgcctcctcctgattatgatggcatgaagacacctgagcttcatgcagaattacat
aaatatggactaaaattacaaaaacgaagtcgggctgtaaaattattgacgtacatttat
aatgagttgcatcctgtgatacctttaacatctaagaaaacagtatctgagtatgtagtt
gtaaatagtgatgatgaggaaccaccaatgaaaagaaaaaattacagtaaaaatgataat
gattgtaataatgactacatatatgaactagtatcatcaaaaggcggcgctgataagtca
gcagcaaatataataaacgaggaacgaaaatttgatgaattcgaaactgtcacaactaat
actgcattaaatattaaagatgagttttacaaattaatagaagatcagaaagaattacat
aataatatcttaacttacgaaccattatgcatagagtctctacactctatgttgaaagaa
aaaggttttaaatgcaaaatgaacacattaatggactttttagacgaacagtgtattaca
ttttattttcaagatatgaaaaaaggaagaaattggaagaaatag
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