Nomia melanderi (Alkali bee): 116429900
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Entry
116429900 CDS
T07404
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116429900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmea03019
]
116429900
Messenger RNA biogenesis [BR:
nmea03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
116429900
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Nuc_deoxyrib_tr
Motif
Other DBs
NCBI-GeneID:
116429900
NCBI-ProteinID:
XP_031839263
LinkDB
All DBs
Position
Unknown
AA seq
283 aa
AA seq
DB search
MDTQYKTIHPVKYLQDHLAQDVRPDGRQFLSFRPISINISSVTHADSSSIFKIGNTTCVC
GIKAELAVPKIEHPDCGYIVPNVELSPLCSPKFRPGPPSDQAQITSKMIELILKNSEAVN
LKDLCIYKSKLVWVLYCDLLCINYDGSVIDACIGALIGALNTLKLPETIYNAVTGNISVH
PMNKICFPVKALPVSVTFAIFNDQLLIADPTDEEESLCLGRLIIVMDEEKLCYIHKPGGV
PISCELFLKSLAKSKKRAELVRSLINTAISSAKEEQSKKQQCV
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggacactcaatataagactattcatcctgtgaaatatctacaagatcatttggcacaa
gatgttagacctgatggtagacaatttttatcttttcgtccaataagtataaatatttca
tcggttactcatgcagatagttcatcgatattcaaaattggtaatacaacatgtgtatgt
ggtattaaagctgaattagcagtacccaaaatagaacatcccgattgtggttatatcgta
ccaaatgttgaactttctccattgtgttcaccaaaatttcgacctggtccaccaagcgat
caagcacaaattacttcgaaaatgatagaacttattctaaagaattcagaagctgtaaat
ttgaaagacttatgcatttacaaaagcaaactagtatgggtattatattgcgatctttta
tgtattaattatgatggttcagtaattgatgcttgtattggagcattgattggagcactt
aatactttgaaattacctgaaacaatctataacgcagtaacaggaaatatttctgtacat
cctatgaacaagatatgttttccagttaaagccttgccagtttccgtaacatttgctata
tttaatgaccagttattaattgctgatcccaccgatgaagaagaaagtttatgcttgggg
agattaataattgtaatggatgaggaaaaactttgttacatacacaaacctggtggagtt
ccaatttcatgtgagctgtttttgaagagtttagcaaaatccaagaaaagggcagaatta
gtaagatcactaattaatactgctatatcatcagcaaaagaggagcaatcaaaaaaacaa
caatgtgtataa
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