Nomia melanderi (Alkali bee): 116430242
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Entry
116430242 CDS
T07404
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
nmea
Nomia melanderi (Alkali bee)
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nmea03009
]
116430242
Enzymes [BR:
nmea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116430242
Ribosome biogenesis [BR:
nmea03009
]
Eukaryotic type
Pre-60S particles
Helicases
116430242
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
PP2
Cas3-like_C_2
Transformer
Motif
Other DBs
NCBI-GeneID:
116430242
NCBI-ProteinID:
XP_031839947
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MKTQNWKELEVPLSDSVLKTIEELKYSYMTPVQAASIPLLLKGKDVAVEAVTGSGKTVAF
IVPMLEILQKRKEKWKSTEVGAIIISPTRELAVQISEVLQKFLNNLSHLKQVLLVGGITI
AEDAEKLRNGANIIVATPGRLEDILSNCKSINLAVRVKSLEILILDEADRLLDLGFSATL
NTILSYLPRLRRTGLFSATQTKELQQLIRAGLRNPALISVKEKANISTPSNLINSYTIVN
TEYKFSAMIDFIQQKGINLKYMVFLSTCACVDYFSHVIQVMLPSVPILAIHGKMKGKRYK
VFDEFRRIDSGILICTDVMARGIDISEVNWVLQYDPPCSASSFVHRCGRTARIGNEGNAL
LFLIENEDAYINFIKKNQKVDLQKVDIEPSISLYEKCLKCMRDLQKKDRLLFDKANRAFV
SYVQAYNKHECNLILRLKDIDLGKLAMSFGLLRMPRMPELKGRNTESFKEEHVDINLISY
LNKQKERNRLEKLQVFQDSGIWPTMHKRKRKQSEPWSETKKKKMEKQENRKKRQEKKIKQ
RMNLVNSTNSTKKKRKKISQQDIEELSKDIALIKQLKKKKISETEFNVAFGID
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacacaaaattggaaagaactggaagtacctttgagcgattctgtattgaaaact
attgaagaattaaaatattcttatatgacaccggtacaggcagcctccataccattatta
ttaaaaggtaaagacgttgcggtagaagcggtaacaggtagcggaaaaacagttgctttt
atagttcccatgttagaaattttacagaaacgaaaagagaaatggaaatctacagaggtt
ggagcaataataatcagtccaacaagagaattggcggtacaaatcagtgaagtcctacaa
aaatttttaaacaatctctcgcatttaaaacaagtattacttgttggtggtataacgatt
gcagaagatgcagagaaacttagaaatggtgcaaacattattgtagcaacacctggtaga
ttagaagatatattatctaattgtaaaagtataaatctggctgttcgtgtgaaatcattg
gaaatattaatcttagatgaagcagacagattattagatttgggtttttctgcaacatta
aacactatattaagttatttgcctcgtcttagaagaacaggtttattttctgcaacacaa
acaaaggaattacagcaactgatcagagcaggcttaagaaatccagctttaatatctgtt
aaagaaaaagcaaatatttcaacaccatcaaatttaataaacagttatactattgtaaat
acagaatataaattttccgcaatgatagacttcatacaacaaaaaggaattaatttaaag
tatatggtttttttatctacatgcgcatgtgtagattattttagtcatgttattcaggta
atgctgccatcagtcccaatacttgctatacacggcaaaatgaaaggcaagaggtataaa
gtatttgacgaatttcgacgtattgatagtggtattttaatttgcactgatgtaatggct
cgtggcatagatatttcagaagttaattgggtattacagtatgatcctccttgctcagct
agtagtttcgtacacagatgtggcagaactgctagaattggaaatgaagggaatgcatta
ttattcttaatagaaaatgaagatgcatatatcaattttattaagaaaaatcaaaaagta
gacttacaaaaggtagacatagaaccatctataagtttgtatgaaaaatgtttaaaatgc
atgagagatttacaaaaaaaggatcgattactttttgataaagcaaacagagcatttgta
tcatacgtacaagcatataataaacacgaatgtaatttgatactaaggttgaaggacatc
gatttaggcaaacttgcaatgagttttggactgttgcgtatgcctcgaatgccggagctt
aagggaagaaatacagaatctttcaaagaagaacatgttgatattaatttaattagttat
ttaaacaaacaaaaggaacgaaatcgtttagaaaaacttcaggtcttccaagatagtgga
atatggcctactatgcataaacgtaaacgcaaacaatctgaaccgtggtctgaaactaag
aagaaaaaaatggaaaaacaggaaaatcgtaaaaaacgacaagaaaaaaagattaaacaa
agaatgaatttagtgaattcaacgaattcaacaaagaagaaaagaaagaaaattagtcaa
caggatattgaagaactttcaaaagatatagcattaataaaacaattaaagaagaaaaag
atttctgaaacagaatttaatgttgcttttggaattgattaa
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