Nomia melanderi (Alkali bee): 116430598
Help
Entry
116430598 CDS
T07404
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36 isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116430598
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmea03019
]
116430598
03012 Translation factors [BR:
nmea03012
]
116430598
Enzymes [BR:
nmea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116430598
Messenger RNA biogenesis [BR:
nmea03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
116430598
Translation factors [BR:
nmea03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
116430598
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
OB_NTP_bind
HA2_C
HA2_N
nSTAND3
ResIII
AAA_22
AAA_19
NPHP3_N
AAA_14
ATPase
NACHT
ABC_tran
RsgA_GTPase
PhoH
NB-ARC
Sigma54_activat
AAA_16
TsaE
Motif
Other DBs
NCBI-GeneID:
116430598
NCBI-ProteinID:
XP_031840837
LinkDB
All DBs
Position
Unknown
AA seq
1010 aa
AA seq
DB search
MTQRRSYQYLSVGKISTKIRKSMSHPYGSFSGHGNHQRRNKNEDRTDNSQSGSSHFEHQG
RGRGGGQGHPPWLKGKEIGLYYRDRGKARRMQKEAQVIKLPENIQHKIERILENSKGFYE
KLYNNEVQVENTNSRMENKYTHIHDSQFKRMFLNIVSGNIQENIAKAVLVKSRIERDSDL
DDKLLNEQRSKEFSEEYENMMKFRLKLPAYQKRLEIIELVNKNQVVVISGETGCGKTTQV
AQFILDDQIKKGNGSTTRIMCTQPRRISAISVAERVAVERVERLGISVGFHIRLERTLPR
DRGSITFCTTGMLLKFMQSDPALKNFSHIILDEIHERSTESDFIIALLKLIIPKRPDLKV
LLMSATLNSERFSKYYNDCPMIHIPGFTYPVEEFYLEDVLVATQFKFNEPPPLPQNYKKH
LKKFKEVQSKRNEFSDIIDPYVRQLVAQRKYPRYVTDQLRNPNSEDLSLDLIEQLIRHIS
ETKPPGAILVFLPGMMDIVKLHRIMVDAGRYPQSQYIIYPLHSRMPTVDQKLIFKEPPQG
VRKIIIATSIAETSITIEDVVYVIDSGKMKYLKFDLSRNVETLNPEWVTLANSKQRKGRA
GRVKPGICYHLYSKAREMTFDEYPLPEMLRTRLEQVILQIKILQLGKARSFLASVMDPPN
MKAIDLSLELLGTLNALDNEETLTPLGYHLAQLPLDPRTGKMIIWAALFSCVEPVFAIAA
SLTFKDAFYCPLGKEEQAKQKKLELSMNQYSDHIALAEALRRFETSYKRGNAGYFCREYF
LSFNTLKLLSEMKTQFGQYLYEMKFLETENPNDRHANRNSDNIALIKAVVCAALYPNVAV
IRYARXXXXXXXXXXXXXXXWTPEDGSVSIHPSSINDKIKNYPSPYITYFTKQRSSSTYL
HDTTCVTAPILLFAASNMCIKREKGNYFITLTSTQNFACDLRTAQLIQKLQEEFNNMLGY
KITHPGTVTWNGHEGDLLNVIIDLICQKDADMGFSDANVEEGEDHFYDGN
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagcgccgaagttatcaatatttaagtgtcggaaagatttcgacaaagatcaga
aaaagtatgtcgcatccttacggatcattttcgggtcacggaaatcatcaacgacgaaat
aaaaatgaagatagaactgataattcccaatctggaagctcacacttcgagcatcagggt
cgtggaagaggtggaggacaaggccatcctccatggttaaagggtaaagaaataggtcta
tattatagagacagaggaaaggcgaggcgtatgcaaaaagaagctcaagtcattaaattg
ccagaaaatattcaacataaaattgaaagaatattagagaactctaaaggattttatgag
aaattatataataatgaagtgcaagtggaaaatacaaatagtagaatggagaacaaatac
actcatattcatgattcacaatttaaaagaatgtttttaaacatagtatctggaaacata
caagaaaatattgctaaagctgtgcttgtaaaatcaaggatagaaagggatagcgattta
gatgataagttactaaatgaacagagatcaaaagaattctcagaagaatatgaaaatatg
atgaaatttcgattaaaactgcctgcatatcagaaaagattggaaattatagagttagta
aataaaaatcaagttgtagtaataagtggagaaactggttgtggaaaaacaacgcaagtt
gctcagttcatattggatgaccaaataaagaaaggtaatggcagtactactcgtatcatg
tgtacccaacccagaaggatatcagcaatatctgtagctgaaagagttgctgttgaaaga
gtagaaagacttgggatatctgttggtttccacattagacttgaacgaacactgcctaga
gatagaggaagcataacattttgtactactggaatgctactgaaatttatgcaaagtgac
ccggctttaaaaaatttttctcatattatattagatgagattcatgaacgttctactgaa
agtgattttatcattgctttattaaaactaattattcccaaaagaccagatttgaaagtt
cttctcatgagtgcaacacttaattctgaacgtttctcaaaatactacaatgattgtcca
atgattcatatcccaggttttacttatccagtagaagaattttatttagaagatgtgtta
gtagctacccaatttaaatttaatgaaccacctccactacctcaaaattacaagaaacat
ttgaaaaagttcaaggaagttcaatcaaaaagaaatgaattctctgatatcatagatcca
tatgttcgacaacttgtagctcagagaaaatatccaagatatgttaccgatcaattgagg
aatcctaacagtgaggatctgtctcttgatctcatagaacaattaattagacacatttct
gaaacaaaaccaccaggggctattttagtttttctgcctggtatgatggacattgtaaaa
ctgcatagaataatggtagacgctgggcgatatccacaaagtcagtatattatttatcca
ttgcactctcgtatgccaacggtagatcaaaaattaatatttaaggaaccacctcaaggt
gttcgaaaaataataatcgcaacttctattgcggaaacgtccataactattgaagacgtg
gtatacgtcattgactccggtaaaatgaaatatttgaagtttgatttgagtaggaatgtt
gaaactttgaatcccgagtgggtaactttggctaattctaagcaaagaaaaggtagagct
ggcagagtgaaacctggcatttgttatcacttgtattctaaagccagagaaatgacattc
gatgaatatccattgcctgaaatgcttagaacacgtttagaacaggtaatcttacaaata
aaaatcctacagttagggaaagctagatcttttctagccagtgttatggatcctcccaat
atgaaagctatagatttgtctctggaattacttggaactttgaatgcattggacaacgag
gaaaccttaactcctttaggatatcatttggcacaattgcctcttgatccgcgaacaggg
aaaatgattatatgggcagcgttattttcttgtgtagaaccggtctttgcaattgctgca
agcctgacattcaaggatgcattctactgtccgttgggaaaagaggaacaagcaaagcaa
aagaaactcgaactcagtatgaatcagtacagcgatcacattgcactagctgaagcttta
agaagatttgagacttcctataaaagaggaaacgctggttatttttgtagggagtatttt
ctttctttcaacaccttgaaacttctttctgaaatgaaaactcaattcggtcaatacttg
tacgaaatgaaatttttggaaactgagaatccaaacgacaggcatgccaatagaaattct
gataatattgcattgataaaagcagtagtatgtgctgcattgtacccaaatgttgctgtg
ataaggtatgcacgatnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnct
tggactcccgaagatggttccgtttccatacatccatccagcataaatgataaaattaaa
aactaccctagtccttatattacatactttacaaaacagcggtcttcatcaacctatttg
catgatacaacatgcgttaccgctccgattttattatttgctgcttcaaatatgtgcata
aaaagggaaaaaggaaattattttattactttaacaagtactcaaaattttgcatgtgat
ctacgaaccgcgcaacttattcagaaattgcaagaagaatttaataatatgctagggtat
aaaataacgcatccaggaacagtgacatggaacggtcatgaaggtgaccttttaaatgtt
attatagatttaatttgccagaaggatgcggatatgggattttcggatgctaacgtcgaa
gagggtgaagatcatttttacgacggcaactaa
DBGET
integrated database retrieval system
