Nomia melanderi (Alkali bee): 116430731
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Entry
116430731 CDS
T07404
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116430731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmea03019
]
116430731
Enzymes [BR:
nmea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
116430731
Messenger RNA biogenesis [BR:
nmea03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
116430731
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
Clp1
CbiA
ATP_bind_1
MMR_HSR1
AAA_16
AAA_22
nSTAND3
AAA_18
TniB
GTP_EFTU
Motif
Other DBs
NCBI-GeneID:
116430731
NCBI-ProteinID:
XP_031841114
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MTDEKAQTQEFKLDPDCELRFEVESKNEKVTLELKSGLAEVFGTELVKGKKYEFTAGAKV
AVFTWQSCTVELVGKTDVSYVAKETPMGLYLNCHAAMERLRETAEKDDTRGPITMIVGPC
DVGKSTLCRLLLNYAVRMGRRPIFVDLDVGQGHIAIPGTVGALLVERPSNIVEGFSQQAP
LVFHFGHKSPQTNVALYNLLVTRLAEVCSDRLQANKKARVSGIVINTCGWVKGDGYKLLT
HAAQAFEVDAILVLDQERLYNELVRDMPDFVKVVFLPKSGGVVERSQTQRIEARDQGVRE
YFYGSRTPLYPHSFEVKWSEARLYKIGAPVLPASCMPLGMKAEDNLTKLVAVTPGPNLLH
HLLSVSFADSPEDDVVQTNVAGFVCV
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgacagacgagaaggcgcaaacgcaagaattcaaattggatccggattgcgaattgcgg
ttcgaggttgaaagtaaaaatgaaaaagtgacgctcgagctgaaaagcggcttggcggaa
gtatttgggacggaactggtaaagggaaagaaatacgaattcactgctggagctaaagta
gctgtatttacttggcaaagttgtacggtcgaattggttggtaaaactgacgtcagttac
gtcgccaaggaaactccgatgggtctgtatttgaattgccacgccgctatggaaaggctc
agagaaaccgcggagaaggacgataccaggggtccgataacgatgattgtagggccgtgc
gacgttgggaaatctaccttgtgcagacttttattaaactacgcagtcagaatgggccgc
agaccaatttttgtagacttagacgtcggccaaggtcatatagcgatacctggcacagtt
ggagctctgctcgtcgaacgtccgtcgaacatcgtggaaggcttcagtcagcaggcaccg
ctggtctttcattttggccacaaatctccgcagaccaatgttgctctgtacaatcttcta
gtaacaagattagcggaagtttgttccgacagacttcaagctaacaaaaaggcgagagtt
tccggtattgtgataaatacttgtggatgggtgaagggagatgggtacaaattactaact
cacgcggctcaagctttcgaagtagacgcgattttggtattagatcaagaaagactttac
aacgaacttgtcagggatatgcctgatttcgttaaagtcgtttttctaccaaaaagcggt
ggtgtggtagagagaagccagacgcagaggatagaagccagagatcaaggtgtcagggaa
tatttttatggatccagaactccgctatatccgcatagttttgaagttaaatggagcgaa
gctagattgtataaaattggagctccggtgctacccgcatcttgtatgccgctgggaatg
aaagcggaggacaatttaacgaaattagttgctgttacacctggtccaaatctacttcat
cacttgctgtcggtctcctttgccgattcaccggaggatgatgtggtacaaaccaatgtt
gctggattcgtctgcgtgtaa
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