Nomia melanderi (Alkali bee): 116431270
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Entry
116431270 CDS
T07404
Name
(RefSeq) vacuolar protein sorting-associated protein 35-like isoform X1
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116431270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nmea04131
]
116431270
Membrane trafficking [BR:
nmea04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
116431270
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps35
SOR
Nbl1_Borealin_N
DUF3896
Motif
Other DBs
NCBI-GeneID:
116431270
NCBI-ProteinID:
XP_031842283
LinkDB
All DBs
Position
Unknown
AA seq
839 aa
AA seq
DB search
MFKVRLIFFLFFIKRTRKNTTVDVFSNSVSLFFSQPMTPAITGVQEQEKLLEEAIGVVNV
QAFQMKHCLDKSKLMDALKHASTMLGELRTSLLSPKSYYELYMAITDELRHLELYLLDEF
QKGRKVTDLYELVQYVGNIVPRLYLLITVGLVYIKTTPGLKRDLLRDLVEMCRGVQHPLR
GLFLRNYLLQCTRNILPDVAEGDDEDGNVRDSIDLVLMNFAEMNKLWVRMQHQGHSRDRE
RREREREELRILVGTNLVRLSQLESVTLDKYKKLVLPGILEQVVSCRDAIAQEYLMECII
QVFPDEFHLQTLNAFLKPCAELQSGVNVKNIIISLIDLLAAFSQRSDGVGGPGSPNQPPG
IPQDVKLFDVFSDQIATIIQTRQDMPPEDVVSLQVALINLAHKCYPDRVDYVDKVLLTTV
QIFQKQNVDKLEYNSAVSRELVRLMKISIDNYKNILTVLKLEHFAPLLDYFDYEGRKLLG
IYIITNILENETLIPTQEQVDAVLSMVSPLVQDQPDQPNIEEDPEDFAEEQGLLGGLIHH
FKSEIADQQYMILSAARKHFSVGGNKRIKYTLPPIVFQAYQLAFTYKALKDQDEMWQKKC
QKIFQFCHTTITALMKAELAELPLRLFLQGAIAIGEIRFDNFEMVAYEFMSQAFSIYEDE
ISDSKAQLAAITLIIATFEQMSCFSKENAEPVRNQCALYASKLLRKPDQCRGVATCSHIF
WSGKSLATGGKEMQDGNKVLDCLKKGIRIASQCMDISVQVQLYVELLNHYIYFYEKGNTV
VTVQILNQVIAKIREELPNLEVSEETEQIQKHLANTLEHLRNRMESPEVDGLSYQGLVL
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaagtccgactgatattctttttattctttattaaaagaactagaaaaaatacg
actgtagatgtgttttctaatagtgtatctttatttttttcgcagccaatgacacctgct
ataactggagtgcaagagcaagagaaattacttgaagaagcgattggcgtggtcaatgta
caagcttttcagatgaaacattgcttggataagtccaaattgatggatgcattaaaacat
gcatccacaatgttgggggaactcagaacgtcacttttgagtccaaagagttattacgaa
ctatatatggcaattacagatgaattaagacatttagaactttatttgttagatgaattt
cagaaaggaagaaaggtcacagatttatatgaattggtacaatatgttggcaatattgtg
cctagattgtatttgcttatcactgttggtttagtatatatcaaaaccacacctggatta
aaaagagatttattaagagatttggtagaaatgtgtagaggtgttcaacatcctttaagg
ggtctctttttaaggaattatttattacaatgtactcgtaatattttaccggatgttgca
gaaggagatgacgaggatggaaatgttcgtgatagtatagatcttgtcttgatgaatttc
gcagaaatgaataaattatgggtacgcatgcaacatcaaggtcatagtagagatagagaa
agaagggagcgagaaagagaagaacttcgaattttagttggaactaaccttgtacgactt
agtcagttagaatcggtaactttagataaatataaaaagcttgttttaccaggaatattg
gaacaagtagtaagttgtagagatgcaattgctcaagaatatctcatggaatgtataatt
caagtatttcccgatgagtttcacttacaaacattaaatgcttttttgaaaccttgtgct
gaactgcaaagtggtgtaaacgtaaaaaatataattatttcgttgatagatcttcttgca
gcatttagtcaaagatctgatggtgtgggaggaccaggaagtcccaatcaaccacctggt
attccacaagatgtaaagctctttgatgtttttagtgatcaaattgccactattatacag
actaggcaagacatgcctccagaagatgtagtttctcttcaagttgctcttatcaacttg
gcacacaagtgttatcctgatagagtagactatgtggataaagttttattaacaactgtt
caaatattccagaaacagaatgtagataagcttgagtataatagtgctgtctcaagggaa
ttagtaagactaatgaagatttcaatagataactataagaatatactaacagtcttgaaa
cttgaacattttgctccattgttagattattttgactatgagggtagaaaattgttgggt
atttatataataacaaatattttggaaaatgagacattaataccaacccaagaacaagta
gatgcggtgctttctatggtatctccattggtgcaagatcaaccagatcaacctaatata
gaggaagatcctgaagactttgcagaagaacaaggtcttcttggcggattgatacaccat
tttaaatctgagatagctgatcaacagtatatgatattaagtgctgccaggaaacatttt
agtgttggtggaaataagagaataaaatatactctaccaccaattgtatttcaggcttat
caattagcatttacatataaggcattaaaagatcaagatgaaatgtggcaaaagaaatgt
caaaaaatttttcaattttgtcatacaactattactgcattaatgaaagcagaattggcc
gaattaccattaaggttgtttcttcagggtgcaatagctataggagaaattcggtttgat
aattttgaaatggtcgcttatgaatttatgagccaagctttttctatatatgaagatgaa
ataagtgattctaaagctcagctggcagcgattactttaatcattgctactttcgaacaa
atgagttgtttcagtaaagaaaatgcggaaccagtgcgcaatcaatgcgctttatatgct
agtaagttactaagaaaaccagatcaatgtaggggcgttgccacctgttctcatatattc
tggtctggaaaatcattggcaacaggagggaaagaaatgcaagatggaaataaagttcta
gattgtttaaagaaaggtattagaatagcaagtcagtgcatggatatatcagttcaagtg
cagctttacgttgaattattaaatcattatatttacttctatgaaaaaggaaacactgtg
gtaactgtccaaattttaaatcaagtaattgcaaaaattagagaagaactccctaatttg
gaagtcagcgaagaaacggaacaaattcaaaaacatttagctaatacattagaacattta
agaaacaggatggaatctccagaagtagatggactttcatatcaaggtcttgttctctaa
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