Nomia melanderi (Alkali bee): 116432079
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Entry
116432079 CDS
T07404
Name
(RefSeq) DNA excision repair protein ERCC-6-like isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
116432079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nmea03036
]
116432079
03400 DNA repair and recombination proteins [BR:
nmea03400
]
116432079
Chromosome and associated proteins [BR:
nmea03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
116432079
DNA repair and recombination proteins [BR:
nmea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
116432079
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Motif
Other DBs
NCBI-GeneID:
116432079
NCBI-ProteinID:
XP_031844284
LinkDB
All DBs
Position
Unknown
AA seq
1148 aa
AA seq
DB search
METDDQEVKEADDEKTDPTNDNDIIRNVSEKVLSVRSEESILREASEEIENIIKTNVHIE
KSEDVKNDEDLKNRNVNNVQRVELEKQVLTGEITPFQAISKQSNSSKSAGSSGKSFQLLD
LEKYIQQQAELARQRKELKEKSKLSKDGCQKVSPKKSKISKTNPKEYKIVEQPKLKSSKR
KLVSENEKTKNLMQSCNYTNKTKEVNDSNIENKQSINTTISCNALKDNTKELVENTDVVP
ANIENDSDSEYIPSDEQIDSEDESRPSQKKKKISVKPVHKKRVLDDGDEQIYRQRLEESG
HPTSEPLHKIDNLFKIPQSIWKKLYKYQKVSVQWMWELHCRNLGGLLGDEMGLGKTVQII
AFLAGLDCSELLSDGGRFRGLGPSIIVCPATLMEQWVKHFHEWWPILRVVVLHQSGTYNG
NLEYLIHSLGSGGILITSYSGVLNHKDLLVANQWHYVILDEGHKIRNPQAKVSKAVKEFS
TPHRLLLTGSPMQNSLKELWSLFDFILPGKLGTLPAFLEHCVTPITRGGYANASPLQEAT
ALQVATMLKDAITPYMLRRTKNDVQHHVTLPEKNEQVLFCSLTDEQKKLYKKYLSSEDVS
FVLHEKTHMEGGRYRARLLIALSALRKICNHPDLFLFSNPIESDEDIDVSEESLEKFGCW
KRSGKMTVVRSLLKIWKKQAHRVLLFTQGRQMMHILESLVQSEDYKYLRMDGTTPMSQRQ
EIIRLFNNDSSYFAFLLTTRVGGLGVNLTGANRVIIYDPDWNPATDAQARERAWRIGQNK
RVTVYRLITAGTIEEKIYHRQIFKLLLSNKVLEDPRQRRLFKTSDLVELFNLNESIDGHS
SESDLLFRDSKLTPTVAKFSTSKIEKMRKLAVTLSKNISKQTLTPASTIQSTTASESNCM
QNDNSEQDDLKGTDRCTITEEKNKSSPHEQNEETSRIQMNAESNVKKKRSLENDEDNSPE
KTVNDNSEVESKTNCLDVDTGTEVESRNDVGSSSCNDLNITEASENSCKTSKATSLNNNE
DIRLKSHKSHHKHKRKKKNSSTEGSEVSAIFEGERVSHLIGRRLGRSEKDEVTPSEDDQY
VLKKLFAKANVTSAFQHETVLSNSGCNPDNNPMQRLARETAQESMESIRKSRKWCWRPTW
DSSSKTDD
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggagactgatgatcaagaagttaaagaagccgatgatgagaaaacagatccaacgaac
gacaatgacattattagaaatgtttcagagaaggttttgtctgtcagaagtgaagaaagt
attcttcgcgaagcgtcagaggaaattgaaaatattataaaaacaaatgtacatattgaa
aaatctgaagatgtaaaaaatgacgaagacctgaaaaataggaatgtaaataatgtgcaa
cgagtagaattagagaaacaggttctgactggagaaattacaccgtttcaagcaatttca
aagcaatctaactcttcaaaatctgcagggtcatcgggtaaatcttttcaattacttgac
cttgaaaaatatattcaacagcaagctgagcttgcaaggcaaagaaaagaattaaaagaa
aagtcaaaactatcaaaagatggatgtcaaaaagtatctccgaaaaagtcaaaaatatca
aagactaacccaaaggaatataaaattgttgagcaaccaaagttaaaaagtagtaaaaga
aaattagtgtcagaaaatgagaaaaccaaaaacttaatgcaaagttgtaattacactaac
aagacaaaggaagtaaatgattctaacatagaaaacaagcaatccataaacacaacaatt
tcttgcaatgctttaaaggataatacaaaagaattagttgaaaatacagatgtagttcct
gcaaatatagaaaatgattctgatagtgaatacattccaagcgatgaacagattgattca
gaagatgagtcaagaccatctcagaagaagaaaaaaatttctgtaaaacctgttcacaag
aaaagagttttggatgatggagatgaacaaatatacaggcaaagactggaagaaagtgga
catccaacatctgaaccattgcataaaatagacaatttatttaaaattcctcagtctata
tggaaaaaactatacaagtatcaaaaggtatctgtacagtggatgtgggaattgcactgt
cgtaatctgggaggtctattaggagatgaaatgggattagggaaaactgtacaaattatt
gcatttcttgcaggactggattgcagtgaactactttctgatggtggaaggttcagagga
ttaggaccaagtataattgtttgtccagctacattaatggaacaatgggtaaaacatttc
cacgaatggtggcccattctaagagtggttgtcctacaccaatctggaacatataatggc
aatctagagtacttgatacattccctgggttctggtggtattttaattacttcctattcc
ggagtactcaaccataaggacttactcgtagccaatcaatggcactatgtgattcttgat
gaaggacataaaataaggaatccccaagcgaaagtcagtaaagcagtaaaagaattctcc
actccgcacagactgttactaactggcagtccaatgcagaactcgttaaaggaattatgg
tccctttttgacttcattttgccaggtaaattaggcaccttaccagcatttctagagcac
tgtgttactcccataacacgaggaggatacgcgaatgctagtcctctacaagaggctacc
gcacttcaagttgccacaatgcttaaagatgctattacaccatacatgcttagaagaacg
aaaaacgatgttcaacatcatgttactttaccagaaaaaaatgagcaggtgttattctgc
agtctaacagatgaacagaagaaattatacaagaaatacttaagctcagaagatgtctcc
tttgttttacatgaaaaaacccacatggagggtggtagatatagagcacgattgctgata
gcactgtcggcgcttaggaaaatatgtaaccatcccgacttgtttctgttttcaaatcca
atcgaatctgatgaggacattgatgtatcggaggaatcattggaaaagtttggctgttgg
aaacgttctggaaagatgacggtagttcgttctcttcttaaaatttggaagaagcaggcc
catagggtactgttgtttactcaagggagacaaatgatgcatatattagagtctctagtg
caaagtgaagattataaatatttgaggatggatggaactacacccatgtcacagcgacaa
gagataattcgtttatttaataatgactcttcatacttcgcatttctattaactactcgt
gttggagggttaggagtgaatttaacaggagcgaatcgagtaattatttatgatccagac
tggaacccagcaactgatgctcaagccagagaacgtgcttggagaataggtcaaaataaa
agggtcaccgtttataggcttattacagctggtactatagaagagaagatataccatagg
caaatattcaaactgcttctctctaataaagttctggaagaccctcgtcaacgaagattg
ttcaaaacgtctgacttagttgaactctttaatttgaatgaatccatcgacggacattca
agcgaatccgatctcttattccgagactctaaactgacgccaacggttgctaaattttcg
acaagtaagattgagaaaatgcggaaattagcagtcacgcttagtaaaaacataagcaaa
caaactcttactcctgcatctacaatacagagtactactgcctcagagagtaattgcatg
caaaatgataatagtgaacaggatgatttgaaaggtaccgatcgttgtaccataacagaa
gagaagaataaaagttcacctcacgaacaaaatgaagaaacatctcggattcaaatgaat
gcagaatccaatgtaaagaaaaaacgaagcttagagaatgacgaagacaattcaccagaa
aagacagtcaatgataatagtgaagttgaaagtaaaacgaattgtttagacgttgatact
ggaacagaggtagaatctaggaatgatgtaggaagttcatcctgtaatgatttaaatata
acggaggcctcagaaaattcatgtaaaacaagtaaagcgacttctttgaataataatgaa
gacatcagattaaaatcacataaatcacatcataagcataagaggaaaaagaaaaattct
tcaacagaaggtagtgaagtttctgccatatttgagggagaacgtgtttcacatttaatt
ggccgtcgtcttggacggtccgagaaagatgaagttacaccgtccgaagatgatcagtac
gtgctgaagaaactatttgccaaagcaaatgttacttctgctttccaacatgaaacagta
ttatcgaactcaggatgtaatccagataataacccaatgcaacggttagcccgagaaaca
gctcaagaaagtatggaaagcatacgtaaatctcggaaatggtgttggagacctacatgg
gattcttcatctaaaacagacgactga
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