Nomia melanderi (Alkali bee): 116432143
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Entry
116432143 CDS
T07404
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116432143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nmea03036
]
116432143
Chromosome and associated proteins [BR:
nmea03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
116432143
REST complex
116432143
Heterochromatin formation proteins
Other heterochromatin formation proteins
116432143
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
Tricorn_C1
Motif
Other DBs
NCBI-GeneID:
116432143
NCBI-ProteinID:
XP_031844404
LinkDB
All DBs
Position
Unknown
AA seq
1550 aa
AA seq
DB search
MKRVRGLDEVASPAAATLKHSSVSAGSGLGGGGGGLEYHSSSGIGVVVPGQAVRSVTSKE
MPGSIQFGSAQAQQQYTGAIVVPTAAPSPIKGSGSAGLSSTCSSSNVNTGGGLHSGIGGG
SNHNMGSQQPAPGTQSQVHSQQQPTIRHKVHSGNVTPLASTPPGSSLGGGSGSQQFQRLK
VEDALSYLDQVKYKFSDQPQVYNDFLDIMKEFKSQSIDTPGVITRVSHLFKGHPELIVGF
NTFLPPGYKIEVQANEQGYAFQVSVSMPSPTATHTATLSQHHCTVNVGSPPVASPPTQPA
KAPPVLQIMQGSGNIHHSHISNNISNNSLTVHAPSPPPVQAYNNSHVSAAQAQAVSQALS
QAQDGIPSSGQTQQSQPVEFNHAINYVNKIKNRFQGQPDKYKRFLEILHTYQKEQRNLKE
SGHMGGTSGTGGTGGAKHLTEAEVYTQVAKLFENQEDLLAEFGQFLPDATNQQSSLSVMF
QSNKTATVNDHTTIVKKPMGPKAPYNNSGNISRELRESSGTGTVERESRDHRDRERERDR
SGVRDINSVQKFVHNAGQLKRSPSFLPSVTAGNSHHIQHGPPPLKKHKVSSMRECVTIAE
AGKYGSLNDYAFFDKVRKALRSQEVYENFLRCLVLFNQEIVSKSELVQLVTPFLGRFPEL
LRWFKDFLGHLPESSTTTTTNTASNMNVEALPNNVVRSHQERPQGDLAMEIDYAACKRLG
ASYCALPKSYIQPKCTGRTQLCKEVLNDTWVSFPTWSEDSTFVTSRKTQYEEFIYRCEDE
RFELDGVIETNASTIRVLEGVHKKMSRMSQEELQKFKLDDCLGGCSPTIHQRALKRIYGD
KAADIIEGLKRNPVVAVPVVLRRLKSKEEEWREAQKGFNKIWREQNEKYYLKSLDHQGIN
FKQSDVKALRSKSLFNEIETLYDERHEQVDDGAADGQNNSGPHLVLPYKDKSVLDDAANL
LIHHVKRQTAIHKEDKQRIKLLLKHFIPDLFFHPRQELSDDERDEDDEKEDLNVAACSNS
QSVTMNTSPLGGGLQANRNKAPASPIPSSTSIKTEPDIKLPIHALSNDPEEAYTLFMGSN
NWYLFLRLHHILCERLTKMYERAVALAEEESRYKQQRKESTAVALRLKPKNEIEIEDYYP
AFLDMVKNVLDGNMESTAYEDTLREMFGIHAYIAFTLDKVVTYAVRQLQHLVSDPICQQC
MELFQREQRQPKESNGAGGLCATAYMRLGAEMAYQRKAEKAMADENCFKIYIYKKDCKMT
MELLDTEGDEAMDNNCREREREGVTVSEKWSTYVERFSAPAGQTSPKDTPTLTDNEPTTN
HPVSNDQAARGGRGRKRKNTDISKKMDGNGWSSLGRILAGRKPVFLYRNVRQWRKRAARM
MSASIPNANNPEKGAESTDKDKAALDSVDAILKRPAGLRLADSGDTSDIINSDETQCRFN
PNSYQMLYVASKEAFLYKQNSFSRARECHPTVTKHLNTKFHQWLSSWASKNVADIQHRLC
QDWLMGRYENLIPHKTRVITDNDQTRSPYRQYNRYRVERLQPDLLTEPCV
NT seq
4653 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcgttcgcgggctggacgaggtagcatcaccagcagcagcaacattaaagcac
tcgtcagtgagtgcaggaagtggcttaggtggcggaggaggtggtttggagtatcattca
agcagtggaataggcgttgttgtacctggtcaagcagttcgatcagttacttcgaaagaa
atgccgggaagcatacaattcggaagtgcccaagctcaacagcaatacactggagcaatt
gttgtgccgaccgcggctccgtcccccattaagggaagtggatctgcaggacttagttct
acatgtagcagtagcaatgtaaatactggtggagggttgcatagtgggataggtggtggg
agtaaccataatatgggttctcaacaacctgcaccaggaacacaaagtcaagttcatagc
cagcaacagccaacaataaggcacaaggttcactctggcaatgtaacaccactagcttct
accccaccaggctctagcttaggtggtggtagtggttcccagcaatttcagagattaaaa
gtagaggatgcattgtcttacttagatcaagtcaagtacaaatttagcgatcagccacag
gtgtataatgacttcttagatattatgaaagaattcaaatcacaaagtatagacactcca
ggagttataacacgagtgagtcatttgttcaaaggacaccctgagcttatagttggtttc
aatacatttcttccacctggatataaaatagaggtgcaagcaaatgagcaaggatatgca
tttcaagtatctgttagtatgccgagtccaacagcaactcatactgctaccttgtcgcaa
catcattgtacagtaaacgttggttcacctcctgttgcaagtccaccaacacaaccagca
aaagcacctccagttttgcaaataatgcaagggtccgggaatatacatcattcccatatt
tcaaacaatatttctaacaacagtttaaccgtacatgcaccatcacctccaccggtgcag
gcatacaataactcacacgttagtgcagcacaggctcaggctgtgagtcaagcattaagt
caagcccaagatggcatacctagtagtgggcaaacacaacagagtcaaccggttgaattt
aaccatgcaattaattatgttaataaaatcaagaaccgattccaaggtcaaccagacaaa
tataaacggttcttagaaattttacatacttaccagaaagaacagcggaacttgaaagaa
tctggtcacatgggtggtacaagtggaactggtgggacgggtggggcaaaacatttaacc
gaagcagaagtttatactcaagttgccaaattgtttgagaatcaagaagatttgctcgca
gagtttgggcaattcttgccggatgccactaaccaacagagttcattgtccgttatgttt
cagagtaacaagactgctacagttaatgatcacaccacaatcgttaaaaaaccaatggga
cctaaggcaccttacaataattcggggaatatctcacgtgaactccgggagtcgagtggt
actggcacagtagaacgcgagagccgtgatcatagggatcgtgaacgagaacgggacagg
tctggcgtacgggatatcaacagtgtccagaaatttgtacataatgcggggcaattaaag
aggagtccatcgtttttgccttcggtgacagccggcaattctcatcatatacagcacggc
ccacccccattgaaaaagcataaagtctcatccatgcgtgaatgtgtcactatagcggag
gctggaaaatacggtagtcttaacgattacgcattcttcgataaggtccggaaagcatta
aggtctcaagaagtctacgaaaatttcttgaggtgtttagtcctgttcaaccaagaaata
gtttctaaatctgaattggtgcaactagtaactccgtttcttggtcgctttcctgagcta
ttacgctggttcaaagattttttgggtcatttacccgagtcttctactacaactacgacc
aatacggcaagcaacatgaatgttgaagcattaccaaataacgttgtaaggagtcatcag
gaacgtcctcagggtgatcttgccatggagattgattatgcagcatgtaaacgtctaggg
gcgtcgtattgcgcgttaccaaagtcttacattcaaccaaagtgtacaggaagaacacag
ttgtgtaaagaagttcttaacgatacatgggtatcatttccaacttggtccgaagacagt
acatttgtaacatcgagaaaaacccaatacgaggaatttatttatcgttgcgaggatgaa
cgatttgaattggatggcgtgatagaaacgaacgcgtctacgatcagagtgcttgaaggt
gttcataagaaaatgagtagaatgagtcaggaggaacttcagaaatttaagctcgacgat
tgtctcggtggttgttcccctacgattcatcagagggccctaaaaaggatatacggcgac
aaggctgccgatattatagaaggccttaagaggaaccctgtagtagctgtacctgtggtt
ctccggcgactaaaaagtaaagaggaagaatggcgagaggcccagaaaggttttaataaa
atttggagggagcaaaatgaaaaatattacctaaaatccctagatcatcagggtattaac
ttcaagcaaagtgacgtgaaagcgttgaggtctaaaagtttatttaatgagattgagacg
ttgtacgacgaaagacacgaacaagtggacgatggtgccgcggacggacaaaataacagt
ggtccacatcttgtactaccctacaaggataaatcggttctagacgatgcagccaatctt
ctgattcatcatgtaaaacgtcagacagccatccacaaagaagacaagcaacgaataaag
cttttactgaagcattttatacctgatcttttctttcatcctcgtcaagagctcagtgac
gatgaaagagacgaagatgatgaaaaagaagatctgaatgtggcagcgtgtagtaattct
caatcagtgacaatgaatacttctccactgggtggtggtttacaagcaaataggaataag
gcaccggcatctccgattccgtcttccacgtcgattaaaaccgaacctgacattaaacta
cccattcatgctctgtcgaatgatcctgaagaagcgtacacgctctttatgggcagcaac
aactggtaccttttcttgaggttacatcatattctctgtgaaagattgactaaaatgtac
gaaagggctgtcgccctcgccgaagaggagtctcgctacaaacagcagcgaaaagagagt
acagctgttgccttaagattaaaacctaaaaatgaaattgaaattgaagattattatcct
gcatttctggatatggttaagaatgtcctggacggcaatatggaaagtaccgcgtacgag
gataccttacgggaaatgtttggtattcacgcgtatattgcctttacgttagacaaggtc
gtaacatacgctgtgagacaattacagcatttagtttctgatcctatatgccaacaatgc
atggaattgttccaacgagaacaacgacaaccaaaagaaagcaatggcgcgggtggtcta
tgtgctaccgcatatatgagacttggtgcagaaatggcgtatcaacgtaaagctgagaag
gctatggcggatgagaattgtttcaaaatatatatatataagaaggactgcaaaatgaca
atggaattattggatacggaaggtgatgaggcgatggacaacaattgtagggaaagagaa
agggaaggagttacagtatctgaaaaatggtctacgtatgttgagaggttttctgcgcca
gctggtcagactagcccgaaagacacccctaccttaacagacaatgagccaacaaccaat
catcctgtgagtaacgaccaggcagcaaggggggggaggggcagaaagcgcaagaacact
gacattagcaagaagatggatgggaatggttggagttctttaggcagaatcttggcagga
cgtaagcctgtatttctatatcgtaatgtaagacaatggaggaaaagggctgcaagaatg
atgtcagcatctattcctaacgctaataatcctgagaagggtgcagaatcaactgacaaa
gataaggcagctctagactctgtggacgctattttgaagcgacctgctggtttaagatta
gctgattctggggatacctctgacattattaattctgatgaaacccagtgcagatttaat
ccaaacagttaccaaatgctttatgttgctagcaaggaagcattcctttataaacagaac
tcgttcagtcgtgccagagagtgtcatccaactgtaacgaaacacttgaacacgaaattc
catcagtggctctcatcttgggcgtctaaaaatgtggcggatatacagcatcggttatgt
caagactggttaatgggtcgttacgagaatttaatccctcacaagacacgagtgatcacg
gacaatgatcaaactagatcaccttaccgacaatacaatcgttatcgagtagaacgcttg
caacccgatcttctgacggaaccatgtgtataa
DBGET
integrated database retrieval system
