Nomia melanderi (Alkali bee): 116432530
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Entry
116432530 CDS
T07404
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
nmea
Nomia melanderi (Alkali bee)
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nmea04121
]
116432530
Ubiquitin system [BR:
nmea04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
116432530
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
116432530
NCBI-ProteinID:
XP_031845469
LinkDB
All DBs
Position
Unknown
AA seq
1562 aa
AA seq
DB search
MMNGVRSQFNVAVTFDRRKITTCTCTCPSKAYWCAHVVAVCLHRIHMPTQVCLRAPVSES
LSRLHRDQLQKFAQYLISELPQQILPTAQRLLDELLSVQPSTINSYCGAPDPTAGPSAHD
QTSWYLDEKTLHDNIQKILIKFCVPAPIVFSDVNYLSTTAPPATAEWSSLLRPLRGREPE
GMWNLLSIVREMFKRTDRNAIPLLEIITEECMACEQILVWWFNTKVALLNGTGYGGKNNM
NSNVHASQHACSSLCDEIVVLWRLAALNPGLSPAEREMLHNRFTAWHMKIIDKVRKSRGN
SVTHNSHNRNNSGGHKDSLKNDLAVFTGFKSALEACYLDWEEYTLPGITYTAGSNPMYHC
PFTCFRHVGDSRSEVNSSAAVLNCQPPVSHHHGRRMEFSYMDRKRLNPRNFTSLCLRNGG
GDGNRSSVSSEGFCENETDIPDISEPQVVLVRRCCAHLNNCGDTDSQEGGGSESSSNSNE
SLKNAQDSDKHRSNASSETHSDSSDSSNNKAATDMKRNRVNHEHREKSRAALPKGSGSKD
KQESDQEKDPSRRPSKDESSSSSSDSPSCDEYHVYYYDPKAVASTNGTSGKDFNKDSQNS
GTPSASTILGNLMKTEDPWDILFARAEGLYAHGHTREACILGVQLGEELLANPPNLMINE
PPVPVKGKKKKQQVNPASHQLTCLASATLAKCCFLCTVLAENPEYHNLAFRVGLFGLEMA
RPPANTKPLEVKLAHQESELVTLLKRIPLGPTELAMVQQRAEQLRDGVLRSRGHALLPIM
LASFIFDALTSRVKHLPTDVDENLGFDAAVTALGLKANVSEADHPLLCEGTRRQRGDLAI
TLLVHYKSEPAKVARIMNKLLDRDVHQLIKTPILPKYYTSNNRPTKSEMVSYLHDEECSS
PLTGTDAGNGENVISNSSRPHSSTSAELETGMSAFTVQPQIVQQTVPTRTKETRYKNKRV
YPSIPNQPSEAGAHFMCELAKTVLMKAGGNSSTSLFTQASTSQNHHGPHKALHMCAFQLG
LYALGLHNCVTPNWLSRTYSSDVSWITGQAMEIGAPAIWFLIESWEGHLTPPEAVSIADK
SSRGSDPNMVRAAAELALSCLPHAHALNPNEVQRAILQCKEQSETMLEMACITVENTAKG
GGVYPEVLFQVAKYWYELYLRHTPGGEQQDDMPPHDPLQLDLNGLFMVEPGPPVDMSNGQ
MMPGPTQAVVVTSTQPPPQPYPTHPTITTLAPLGVGMPYAMGPYSFVHPHHSITTFGGPM
PSHRVTLPPAPSHMQMYHAAFPSHPGHPQHPQHPHHPTQSAQPQSLPQYYTPQPPPPPGT
HHLFTMQQPMPVNVQAGVTGSIPGQNNMPGSALVQAQPMISTVRTQPQVHRQTQTFSPYQ
LRALVSAYRVGMLALETLARRVHDDRPQAKYARNPPYGEDVKWLLRVSKRLGTQYLHQLC
ICTVNSIVSPFVLHDVVLEAAQYLARSNPALVIHHLRSALLAPLVHKCQQMYIQCMHQKL
YHLVVGDYEEFANVVCAARAAFHITPEGHAQFKEWLQSIKRSQSCNKELWAQINAALQQN
GK
NT seq
4689 nt
NT seq
+upstream
nt +downstream
nt
atgatgaacggcgtcaggtcacagttcaacgtcgcggtgacgttcgatcggcggaagatc
acgacctgcacctgcacgtgcccgtcgaaggcctattggtgcgcccatgtggtcgccgta
tgtcttcacaggatacacatgcccacgcaggtatgcctgagagctccggtcagcgagtcc
ctgtcgcgtctgcaccgcgaccagctgcagaagttcgcgcagtatctgatcagcgagctg
ccgcagcagattctgcccacggcgcagcgcctcctcgacgagctgctgtcggtgcagccg
agcaccatcaacagctactgcggcgcgcccgacccgaccgcggggccctcggcgcacgac
cagacgtcctggtacctggacgagaagaccctgcacgacaacatccagaagatcctcatc
aagttctgcgtgcccgctccgatagtcttcagcgatgtaaattaccttagcacgaccgcg
ccgccggcaaccgcggagtggtcctcgctgctgcgacccctgcgcggccgtgaaccggaa
ggcatgtggaacctcctgtcgatcgtgcgcgagatgttcaaacgcaccgatcgcaacgcg
ataccgttgctggagatcatcaccgaggagtgcatggcctgcgagcagatcctcgtctgg
tggttcaacacgaaggtagcgttgctgaacgggaccgggtacggcgggaagaacaacatg
aacagcaacgtgcacgcgtcccagcacgcctgctcgtccctctgcgacgagatcgtcgtg
ctatggagactggccgcgttgaatcccggactgtcccccgccgagagagaaatgcttcat
aatcggttcacagcctggcacatgaagatcatcgataaggtgaggaagagccggggcaat
tcggtgacgcacaattcacacaacaggaacaacagcggcggccacaaggactcgctgaag
aacgatctggcggttttcaccgggttcaaatcagccctggaggcctgctatctggattgg
gaggagtacacgttgccgggtatcacctacaccgccggaagcaatcccatgtatcattgt
ccgtttacctgcttccggcacgtcggagattctaggagcgaggtgaactcgagcgcggcc
gtgttgaattgtcagccgccggtctcgcatcatcacgggagacgcatggaattcagctac
atggaccggaagcggttaaacccgcggaacttcacgagcctgtgtctgcggaacggcggc
ggagatgggaaccggagcagcgtcagttccgagggtttctgcgagaacgagaccgacata
cccgatatatccgagcctcaagtggtgctcgtcagacgatgttgcgctcatctaaacaat
tgcggggacacggactcacaggagggtggtggcagcgagtcgtcgtccaacagtaacgaa
agcctgaagaacgctcaagattcggacaagcaccgctcaaacgcctcgtccgagacccat
agtgatagtagtgatagtagtaataacaaagctgccacggacatgaagcgcaacagggtg
aaccacgagcaccgcgagaaatcgcgcgccgctctgccgaagggcagcggttcgaaggac
aagcaggagtccgaccaggagaaggacccgtccaggagaccgtccaaggacgagagctcg
tcgtcgagcagcgacagtccatcctgcgacgaatatcacgtttactactacgaccccaaa
gccgtggccagcaccaacggcacctccggcaaggacttcaacaaggactcccagaattcc
ggcacaccgagcgcgagcactattctgggcaacctgatgaagaccgaggacccatgggat
atactcttcgccagggcagaggggctctacgcgcacggacacacgcgggaagcttgcatt
ctgggcgtgcagcttggggaagagctgctggcgaaccctccgaatctcatgatcaacgaa
cctcctgtgcctgtcaaggggaagaagaagaagcaacaagtaaacccggcgtctcatcag
ctcacgtgccttgcgtcggctactttggcaaagtgctgcttcctctgcacggtgctagca
gagaatcccgagtatcacaacctggcgttcagagtcggtttgttcggcttggagatggct
aggccgccggctaacactaagcctcttgaggttaaattggctcatcaggagagcgaactg
gtaactcttctgaagaggatcccgctaggtccaaccgagctagccatggtccaacagaga
gccgagcaacttagggacggtgtgctgcggtccagaggtcacgcgttgcttcccattatg
ttggccagtttcatattcgacgccctgacatcaagagtaaaacacctgcccacagacgtt
gacgagaacctcggattcgacgcggccgtcaccgctctggggctgaaagcgaacgtaagc
gaagccgatcatccgcttctttgcgaaggcacgagacgccaaagaggagacttggccatc
acattgctggtccactacaagtccgagcccgcgaaggtggccagaatcatgaacaaactg
ttggaccgggacgttcatcagttgatcaagacgccaattctgccgaagtattacacctcg
aacaaccgacccaccaagagcgagatggtcagctatcttcacgacgaagaatgctcctct
ccgctcactggaacggacgctggtaacggcgagaacgttatcagcaacagcagcagaccg
cacagtagcaccagcgcggaactagaaactggaatgagtgcgttcacagtgcaaccgcag
attgtccagcaaactgtgcctaccaggacgaaggagacaagatacaaaaataaaagggtc
tatccatccattcctaaccagccgtccgaagccggcgctcatttcatgtgcgaactggcg
aagacggttctgatgaaggctgggggcaacagttcgacgtcgctgttcacgcaagcgtcc
accagccagaatcatcacgggccgcacaaggctctgcacatgtgcgcgttccagctcggc
ctgtacgctcttggactgcacaattgcgtgacgccgaactggctcagccgcacatattcg
agcgacgtctcttggatcacgggtcaggcgatggagattggcgcgccggcgatctggttc
cttatcgagagctgggagggacacctaacgccaccggaagccgtcagcatagcggacaag
tcatcgaggggtagcgatccgaatatggtcagagcagccgcggaactcgcgttgtcctgt
ctgccgcacgcccacgcgttgaatccaaatgaggttcaaagagccattttacagtgtaag
gaacaaagcgaaacgatgttggagatggcttgcatcaccgtggaaaacaccgctaaaggc
ggcggtgtttatccggaagtgctttttcaggtcgccaagtattggtacgaactatatctg
aggcacacgcctggcggtgagcagcaggacgacatgccgccacatgaccctctacagtta
gacttgaacggtttgttcatggtggagcctggtccaccggtggacatgtcgaatggtcag
atgatgcctggacccacgcaggctgtcgtcgtgaccagcactcagccacctcctcagccg
taccctactcatccaaccataaccacgttggcacctttaggggttggcatgccgtacgca
atgggcccctacagtttcgtacaccctcaccactccatcacaacctttggcgggccgatg
ccctcgcacagggtaactctgccgccagcaccgtcgcacatgcagatgtaccacgctgcg
ttcccgtctcatcccggccacccgcagcatccccagcatccgcaccacccgacgcagtcc
gcgcagccgcagtcgctaccacagtactacacaccgcaaccaccgccaccaccgggaact
catcatctgttcactatgcagcagcccatgccggtcaatgtacaggcaggagtgaccggg
tccattcctggacagaacaatatgcctggctcagcgctggtccaagcacagcctatgata
tccactgtgaggacacagccgcaggttcacaggcagactcaaacattcagcccctaccag
ctccgagccctcgtctcagcgtatcgcgtgggtatgctagccttggagactctagctcgc
agagtgcacgacgacagaccgcaggcgaaatacgcgcggaatcctccatacggggaggac
gtgaagtggctgttgagagtgtcgaagcgtctcggcacgcagtacctccaccagctttgc
atctgtaccgtgaacagcatcgttagcccgttcgtcctccacgacgtcgtactggaggcg
gcgcagtacctagctagaagcaatccggcgcttgtgatccaccacttgagatctgccctg
ctggcccctctcgttcacaagtgtcaacagatgtacattcagtgcatgcaccagaaactg
tatcatctggtggtcggcgactacgaggagttcgcgaacgtcgtgtgcgcggctagggca
gcgtttcatatcactccggaaggacatgctcagttcaaggagtggctacagtctatcaaa
agatctcagtcttgcaacaaagaactgtgggcgcagatcaacgcggcgctgcaacagaat
ggcaaatga
DBGET
integrated database retrieval system
