Nomia melanderi (Alkali bee): 116432801
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Entry
116432801 CDS
T07404
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
nmea
Nomia melanderi (Alkali bee)
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nmea03016
]
116432801
Enzymes [BR:
nmea01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
116432801
Transfer RNA biogenesis [BR:
nmea03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
116432801
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
DUF1870
YqgF
TAF1C_C
Motif
Other DBs
NCBI-GeneID:
116432801
NCBI-ProteinID:
XP_031846035
LinkDB
All DBs
Position
Unknown
AA seq
300 aa
AA seq
DB search
MINLISSRNNVFIWTAEDWLKLRRDHRIIGELIGCLPKKPRQDVLSGLPLLLQSEEVSLL
LEKNIAQLICYPSLQKPPTESLKLAFEEYRNTLFIEQEECLRNERKKQVVSMMDKIVEGK
KRKILGIQTRKKKARKPLDPEIQEALNSIKINRQQLLEEEMAKLPQLDKTEALIQTHTVH
PWVDEGETEVVEWKYPCNAKEQLRYCTYKDLWEKGYFITSGEKFGGDFLVYPGDPIMFHS
QFIIHCKDRNEEIPIIELSAQCRIAWHVRKTRVYAFFSKDQECILYESFQWAESKVLENG
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgataaatttaatttcatcaagaaataatgttttcatatggactgcagaagattggttg
aaacttcgtagagatcatagaataattggtgaattaataggttgccttccaaagaaacct
aggcaagatgtactgtcaggtcttccgttacttttacaatcagaagaagtatctcttttg
cttgaaaaaaacatagcccaacttatctgttatccatctcttcaaaaaccaccaactgaa
tcattgaaactagcttttgaggaatatagaaatacattatttatagaacaagaagagtgt
ttaaggaatgaaagaaaaaaacaggtagtcagtatgatggataagattgtagaggggaag
aaacgaaagatacttggaatacaaacaaggaaaaagaaagcaaggaaaccattagatcca
gaaatacaagaagcccttaatagcattaagataaatagacaacagttgctagaagaagaa
atggcaaaactgcctcaattagataagactgaagctctaattcaaactcatacagtgcat
ccatgggttgatgaaggtgaaactgaagtagtagaatggaaatatccttgtaacgctaaa
gaacaacttcgatattgtacatacaaggatctatgggagaagggatatttcataacaagt
ggggaaaaattcggaggagattttttagtataccctggggatcctatcatgtttcattca
caatttataattcattgcaaagacagaaatgaagaaattccaataattgaactttcagct
caatgtcgtattgcatggcatgttcgaaaaacaagagtatatgcatttttttctaaagac
caagaatgtattctatatgaatcatttcaatgggcagaaagtaaagtacttgaaaatgga
tag
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