Nomia melanderi (Alkali bee): 116432916
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Entry
116432916 CDS
T07404
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
116432916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nmea04131
]
116432916
Membrane trafficking [BR:
nmea04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
116432916
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
WD40_CDC20-Fz
TPR_Vps41
ANAPC4_WD40
Beta-prop_WDR5
WDR55
zf_RING_Vps8_fungal
Beta-prop_EML_2
Beta-prop_WDR3_1st
zf_RING_Vps8
Beta-prop_THOC3
TPR_VPS8_2
Beta-prop_WDR36-Utp21_1st
zf-RING_UBOX
PQQ_2
Beta-prop_EML
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IP5PC_F
zf-C3HC4_2
Rtf2
zf-RING_2
VPS18_RING_C
zf-RING_11
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
116432916
NCBI-ProteinID:
XP_031846274
LinkDB
All DBs
Position
Unknown
AA seq
1299 aa
AA seq
DB search
MAENGLGSDAESQEYLATEIINLDIEELDNTEYAIPAVEELPSLESILTEPDCASLSGTD
EDFGLTAGEKLGSSETTSVGSHLSLNSLNKPNKTSQSTSSGAILRHVILKGISSQIVSAS
EKVNAGLASAVAAGGNMLVVGTSHGLVLGFDSSQTLRWCDQEARHQGSVSALCFNHDGSR
VLAGFARGHILMIDSSNGKVLRTLSDVHPLDTAVLHVKFTDSPKVALCSDSGGSVFELNF
TRVMGVRGCDSKCLFSGSRGEVCTLEPLLLNHLPSHPLKNYTLVAMATLSKVIVVCIRPR
TRVVLTHPLSGAPIAPPQLSWQLVVIQAADASRVIDPVLALARDDVVYFYQVCTEASSRV
KLSPLRRMTLPYTISNLRWLNPRSLAVLDTQERLHLLDVRAQDNLETLDMSRVGISYASS
HFKGLSTGGNVSKAMALAGERACYNTVVTFGTQLLLLGTKSLHVVCIRTWTERLRHLTMQ
RRFPEALALGLSFYQDKGKAVVGLRGSKQRRKQIARDKVCQVLIQYMEELNRCSVDENTE
FEIVTTCVDYCIQLENTELLFGKLWDLVSESEGLKASYLHALESPLLDGSLRPRLPPLIA
QQLVTVYDQEEKVDSLQAIIVLLDVDCLDIHQVTTICRQRGLWEALIHLQTTALGDFTAP
IHQLVPVLQSYLTNSINSLSRDSIQLGNAILVYASCCLAGRGFPRDELPEGKSQRAKTDV
LRALLSQHSSLANDSERQYPYLRILLQFDAKGFLDVIAIAFQEPEFTSEMGLRQRQRLID
VLLSIVMPSTPLSPRNPDCITDEQRNLVLIFIANEVAENLINLEPSMLNKMIEILCTDSS
MGSSKELKTDKENAILGLLRSKKLRNISDNTLLNLAERANFMQVAELLYSAREDWIAVCK
CMILHPLRHHDIWPWLEHLPQSSLQEVVMINAEALIGINPNQFAMLITTHMQNKIDEIIQ
KLTNTPSVQYTLLEALYQILQYKEDDISLELSSELLEKYLELMCELQPECVVDHIQGVHG
CRLNEALSIVQKANHKDAEAVMLEKLGNYQDAFEILFKEFQNNLKLYCQNESSENESIHA
TIQLAGLCRRSAGNLDWMPLVETILRTHSKCNNEQVEKLTGKLLRIVLEFLSGTTALSIV
LEQILKHPLATSGTIGDIRQLLSGVLTHSRYEQTLVETTARLVSLELHKALKKSLREAEK
ACASISLVCPICRHLLSQCTNYAVIFSCGHGFHSECIGEPRSCYKCLKAKGWAPIVTNIT
HSTKSFHEHKQILPPEFMRNNDFTLRLAPPTLPDLEGIF
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaatgggttgggatcggatgccgagtctcaagaataccttgcaacagagatt
attaatttagacatcgaagagttggacaacactgaatatgctattcctgctgtggaggaa
ttaccttccttagaaagtatattaacagaacctgattgtgcatcattatctggaacagat
gaagattttggtttaacagcaggggagaagttaggcagcagtgaaactacaagtgttggg
agtcatttatcattaaattctttaaataaaccaaataaaacttcacaatcaacatcttcc
ggtgctattttgaggcatgttatactcaaaggaatatcttcacagattgtctcagccagt
gaaaaagttaatgctggtttggcaagtgcagttgctgctggaggaaacatgctagtggtt
ggtactagtcatggattagtattaggttttgactcttcacaaacattaagatggtgtgat
caagaagctaggcatcaaggttctgtatctgcattatgtttcaatcacgatggaagtaga
gtattagcaggttttgctaggggacatatattaatgatagatagctccaatggaaaagtt
ctaagaacactctctgatgttcaccctctcgatacagctgtactacatgttaaattcaca
gattcaccaaaagttgcattatgtagtgacagtggagggtcagtttttgaattaaacttc
acaagagttatgggagtgcgaggttgtgatagcaaatgtttatttagcggatctagaggc
gaagtgtgtacattagaacctttgttattgaaccatctaccatcgcacccccttaaaaat
tatacactagtggcaatggcaacattatcaaaggtaatagtagtttgtataagaccacga
acacgtgttgtattaactcatcccctgtctggtgctcctatagcaccgccacaactgtct
tggcaacttgttgttatacaagcagcagatgcttctcgagtaatcgaccctgtccttgca
cttgcaagagatgatgtggtttacttttaccaagtgtgcactgaagctagttcaagagta
aaattatctcctctcagaaggatgactcttccttatacgataagtaacttaagatggtta
aatccaagatcattagcggtactggatacgcaagaaagattacatctattagatgtaaga
gcgcaagataatttggaaactttagatatgagtcgcgttggcatatcttatgcttccagc
cattttaaaggtctttccactggtggaaacgtttcaaaggcaatggcattggctggtgaa
cgagcatgctataatactgtagttacatttggtacccagcttttactgttaggtacaaaa
agtttacacgttgtgtgcatacgaacgtggacagaacgattgagacatttaacaatgcag
agaagatttccagaagccttagcattaggactctctttctaccaagataaaggaaaggct
gtcgttggtctccgtggttcgaaacaacgtcgtaaacaaatagcacgcgataaagtgtgt
caggttttaattcaatatatggaagaattaaatcgttgctctgtagatgaaaatacagag
ttcgaaattgtcacaacgtgtgtagattattgtatacaattagaaaatacagagctatta
tttggaaagttatgggatttagtatccgaatccgagggacttaaagcgagttatttacac
gctcttgaaagtcctttattagatgggagtctgcgacctcgactaccaccgttaattgct
caacaattagttaccgtttatgaccaagaggaaaaggtggactccttgcaagcaattata
gtgttactagacgttgactgcttagatattcatcaagtaacaacaatttgtcgccagcga
ggactttgggaagctttaatacatcttcaaacgactgcgttaggtgattttactgcacct
attcatcaattagtacctgttttacaaagttatttaacaaattcgataaattcattatca
cgagatagtatacagcttggtaatgcaattctggtttacgctagttgttgccttgctggt
cgtggttttcctagggacgagcttcccgagggtaaatctcaaagagcaaagacagatgta
ttgagagctttactttcacaacattcaagtttagctaatgattcagaaaggcaatatccg
tatttaaggattttgcttcagttcgatgcgaaaggattccttgatgtgatagcgattgct
tttcaagaaccagaattcacatctgaaatgggtctcagacaacggcagagactcatagac
gtattattaagtattgtcatgcctagtacgccacttagtccaaggaatcccgattgtatc
accgacgaacaaagaaatctagttcttatatttatagctaatgaagtcgcagaaaatttg
attaatttggaacctagtatgttaaataaaatgatagaaatattatgtaccgattcaagc
atgggatcatcaaaagagcttaagactgataaagaaaatgcaatattgggattattgcgt
tcaaagaaattgcgtaatatatcagataatactttacttaatttggcagagcgagctaac
tttatgcaagttgcggaattgctgtatagtgccagggaggattggattgcagtttgtaaa
tgtatgatactgcatcctcttagacaccatgatatttggccctggttggaacaccttcct
cagagttcgttacaagaagttgtaatgattaatgctgaagctctaataggaatcaatcca
aatcaattcgcaatgcttataacgacacacatgcaaaataaaattgacgaaataatacaa
aaactaacaaatactccaagtgtacaatacaccctgctggaagctttatatcaaatacta
caatataaagaagacgatatctcattagagctttcaagtgaactgttagaaaagtatctg
gaattaatgtgtgaattgcaaccagaatgtgtagttgatcatattcaaggtgttcatggt
tgtagactgaacgaagcattaagtatagttcaaaaagcaaatcacaaagatgcagaagct
gttatgttagaaaagttgggtaattatcaagacgcgtttgagattctttttaaagaattt
caaaataatctgaaactgtattgtcagaatgaaagttcagaaaatgaatcgattcatgct
actatacagctagctggactgtgcagaaggtctgctggaaatttagattggatgccgctt
gtggaaacaatacttcgaacacattcaaaatgtaacaatgaacaagtcgaaaagttgact
gggaaattgttaaggattgtgttagaatttctgagtggaacaacggcattatctattgta
ttagaacagattctaaaacatccacttgcaacgagtggtacaataggcgatataagacaa
ttactatctggagtacttacacattctcgatatgaacaaactttagtcgaaactacagcg
cgtttggtcagtttagagcttcacaaggcattgaaaaagtcattaagagaggcagaaaaa
gcatgtgccagtatatcactcgtttgccctatatgtcgtcatttattgtcgcaatgtacg
aattatgcagtaattttcagttgtggccatggttttcattcagaatgtataggcgagcca
agatcttgttataaatgtttaaaagcaaaaggatgggctcccattgttaccaacatcaca
cattctaccaagtcattccatgaacataaacagattctaccacctgaatttatgcgcaat
aatgattttactctaagacttgcaccacctactttaccagatcttgaaggtattttctaa
DBGET
integrated database retrieval system
