KEGG   Nomia melanderi (Alkali bee): 116433227
Entry
116433227         CDS       T07404                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
nmea  Nomia melanderi (Alkali bee)
Pathway
nmea03013  Nucleocytoplasmic transport
nmea03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:nmea00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    116433227
  09122 Translation
   03013 Nucleocytoplasmic transport
    116433227
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nmea03019]
    116433227
   03041 Spliceosome [BR:nmea03041]
    116433227
Messenger RNA biogenesis [BR:nmea03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     116433227
Spliceosome [BR:nmea03041]
 Complex C
  Other components
   EJC/TREX
    116433227
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    116433227
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_CDC20-Fz WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_WDHD1_1st EIF3I WDR55 ANAPC4_WD40 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR19_1st Beta-prop_WDR3_2nd Beta-prop_CAF1B_HIR1 Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_Vps41 Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_EML RMC1_N eIF2A Tricorn_2nd Beta-prop_NOL10_N Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st NBCH_WD40 PAC11 DSE1_N WDR90_beta-prop_4th Beta-prop_ELP1_1st Beta-prop_TEP1_C B-prop_COPA_B_2nd TRM82_WD Beta-prop_WDR75_1st Beta-prop_EIPR1 PD40 Peptidase_S9_N Beta-prop_DCAF12 Beta-prop_Nup120_160 vWF_A PROPPIN Beta-prop_NUP159_NUP214 DPPIV_N
Other DBs
NCBI-GeneID: 116433227
NCBI-ProteinID: XP_031846960
LinkDB
Position
Unknown
AA seq 320 aa
MSVSRVEELINYFKSHNKIREQQSHSAKVHSVGWSCDGKLLASGSFDKSVCIFSLGPDRL
KQETTFRGHGGSVDQLCWHAFYPELLSTASGDKTVRIWDTRTQKCTANISTRGENINISW
SPDGNTIAVGNKEDLVTFIDARVMKIRAEEQFNFEVNEISWNKDSDTFYLTNGQGCVHIL
SYPDLELLHVIKAHPGTCICIEFDPTGRYFATGSADALVSLWDADELCCLRTFSRLEWPV
RTISFSYDGQLLAAASEDLVIDIGEVETGEKIADIPVEAATFTVAWHPKQYLLAYACDDK
DTYDRKRDAGSLKVFGFAND
NT seq 963 nt   +upstreamnt  +downstreamnt
atgtctgtttctcgtgtagaagaactgattaattattttaagtcacataacaagattagg
gagcaacaaagtcactctgcaaaagtacacagcgtaggatggagttgcgatggaaaactt
ttggcgtcaggttcatttgataaatctgtttgtatattttccctgggaccggatcgtttg
aagcaagagacaacattcagaggacatggtggcagtgtagatcagctctgttggcacgct
ttttatccagaactgttgtccactgcaagtggagacaaaactgtacgtatatgggataca
agaactcagaagtgcactgcaaatataagcactagaggagaaaatataaatatatcatgg
tctcccgatggtaacacaatagcagtaggaaacaaagaagacttggttactttcatcgat
gcacgtgtaatgaaaattcgcgcagaagaacagttcaactttgaagtaaatgaaatttca
tggaacaaggactctgatacgttttaccttacaaatggacaaggctgtgtacatatactt
agctatccagatttggagttgttacacgtgatcaaagcacatccaggaacatgcatttgt
atagaatttgatcccactgggagatattttgctactggttcagctgatgcattagtttct
ttgtgggatgcagatgaactgtgctgtttaaggacattctctagattagaatggccagtt
agaactatatcgttctcttatgatggacaacttttagcagctgcatcagaagatcttgtt
atagatataggtgaagtggaaactggagagaagattgcagatatacctgtagaagcagca
actttcacagttgcttggcatccaaaacaatatttattagcatatgcatgtgatgacaaa
gatacttatgataggaaacgagatgctggcagtttaaaagtatttggatttgctaatgat
tga

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