Nomia melanderi (Alkali bee): 116433274
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Entry
116433274 CDS
T07404
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116433274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmea03021
]
116433274
Enzymes [BR:
nmea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116433274
Transcription machinery [BR:
nmea03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
116433274
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
YjcQ
Motif
Other DBs
NCBI-GeneID:
116433274
NCBI-ProteinID:
XP_031847048
LinkDB
All DBs
Position
Unknown
AA seq
1705 aa
AA seq
DB search
MVLNKYRPPRLTPKHLDPSCLMFSMFTANDIRNLSVTKIRTPLSFNVLGHPLKGGLYDPS
LGPLQESSDPCGTCGCNVYKCPGHFGHIELPVPVVNPLFHKGLFMLIKLTCLQCSLLQIP
PYVKLLLQAKLRLLQKGYLTDLEGLEQEVMILVANSNNPYEIDTQVIQDVIDGYIEAIIN
KSRFNQSIVQYDEVQFNTKIINMQWHTYVENVLKQYTTPKICVFCKEVIPKVTSLKNKIM
TIKMTDTVTERHSGGAVHKLETVMVMPNQSKEYLRNLWQNERDFLKVIIPCFGMVDIEYP
TDIFFFEVIPVLPPIVRPVNYVNGQMVEHPQTQVYKSIIQDCLVLRNIIQTMQDGDTNQL
PEEGRLVFEQIKGNTVTEKLHNAWQSLQVNVDHLMDRDMNRTTDSANCQGLKQVIEKKEG
VIRMHMMGKRVNFAARSVITPDPNLNIDEIGIPETFALKLTYPTPVTPWNVVHLRQLVLN
GPDVYPGAVLIENEDGRIQRISPDDAVQREATAKRLLTTSDRANKFFKGIKIVHRHLQNG
DILLLNRQPTLHKPSIMAHKARILKGEKTLRLHYANCKAYNADFDGDEMNAHFPQNELAR
SEGYNIAHVPNQYLVPKDGTPLSGLIQDHMISGVRLTVRGTFFTKQDYMQLVYAALSTIQ
ENIVLLPPSIIKPEPLWSGKQIVSTVIINIIPPNQARINLTSNAKINAKEWQTGKARRWK
CGTEFSDPKTMSEAEVIIRNGELLCGVLDKTHYGATPFGLIHCVFELYGGVCSTTLLSAL
GKLFQAGLQRNGFTLGIEDILLVKKADKKRKEIISECRQIGESVQKSILELPEDTPMDVV
SAKMEESYWSNPKFRTQVDRKYKSALDVYTNDINKACLPAGLLKKFPHNNLQLMVQSGAK
GSTVNTMQISCLLGQIELEGKRPPLMISGKSLPSFPAYDPTPRAGGFIDGRFMTGIKPQE
FFFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGLVINYDSTVRDSDGSLVQIYYGEDG
LDIPGSRFLKKEQIDFLVHNRDAIINKQIIESLKEDSDTSKILKLAKKIKKWESKNGHAL
QKRRISPFTKFSAQPVKIKAAKFKEIDENSGRSKAALSLMRKWIRAPEEEKDAIYAQCVR
CPDPITSHYRQDVDFGVLSERLEHLIDEYIANKSTESPIKRSDLRDLLSMKVMKIVCPPG
EPVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMMASKSIKTPSMEIPF
KKDLKNISKRSNKLRLKLTKCVLANILNNITIDRKMEQWPDRRLVHTMTLQFFPYKAYKG
EFCIQPHDALKKAEEVFFKALFREIKKVAKVTGALLHIEEEKKSTNDDDALLDQTEPDER
PSLKSRSNLGEMHESSDEDEAAEDADATLTRSISRHRENQEYEDPEEEEVDDVNDKDDDT
TVENNESSDRMEDQQNGDGDEDIEGEKSDDVSEIYNKQRRRDITNMYHHAIEYDYDEEKY
SWCKLTFWLPLKMIKLDLPTIIRNVANRVVLWEVPCIKRAFTFQNNDGETVLKTDGINII
EMFKYDRSLDLNKLYSNDIYGISQTYGIEAANRVIVKEVKDVFKVYGITVDSRHLSLIAD
YMTFDGRFQPLSRKGMEDSASPLQQMSFESSLNFLKHATLQGKQDNLVSPSSRLMLGQPC
KSGTGACALLLKMQKQPEVTLSVDA
NT seq
5118 nt
NT seq
+upstream
nt +downstream
nt
atggtactaaacaaatatcggccaccacggttaactccaaaacatttggatccgagctgc
ttgatgttttctatgtttactgcaaacgatatacgtaatttaagcgtcaccaaaataagg
acacccttatcatttaatgtattgggacatccattaaaaggaggattatatgatccatca
ttaggtccattacaagaaagttcagatccatgtggaacatgtggatgcaatgtatataaa
tgtccaggtcattttggtcacatagaattacctgttccagttgtaaatccactgtttcat
aaaggattgtttatgctgatcaaactaacatgtttacaatgttcccttttacaaattcca
ccatatgtaaaattattattgcaagcaaaattaagattacttcaaaagggatatcttacc
gatttggaagggctggaacaagaagtaatgattcttgttgctaattcaaacaatccttac
gaaattgatacgcaagtaatacaagatgtgattgatggttatatagaggctattattaat
aagtccagatttaatcaatccattgtacagtacgatgaagtgcaattcaatacaaagatt
atcaatatgcaatggcatacgtacgttgaaaacgtccttaaacagtacacaacaccaaaa
atttgtgtcttttgtaaagaagtcataccaaaagtgacaagtttaaaaaataaaattatg
acgatcaaaatgaccgataccgttaccgaaagacattcaggcggtgcagttcataaatta
gaaacagtaatggtaatgccaaaccagtctaaagaatatctcagaaatctttggcaaaat
gaaagagatttcctcaaagttattattccttgctttggaatggtagatattgaataccca
acagatatatttttctttgaagtgatacccgttttaccacctatagttcgaccagtcaat
tatgtcaatggacaaatggtagaacatccgcagactcaggtctacaaaagtattattcaa
gattgtcttgtccttagaaatattattcaaacaatgcaggatggagatacaaatcaatta
ccagaagaaggtagactcgttttcgagcaaataaagggtaacactgtgacagaaaaattg
cacaatgcttggcaaagtttacaagtaaatgtagatcatttaatggatcgtgatatgaac
agaacaacagactccgccaattgccagggtctaaaacaagttatagaaaagaaggaaggt
gttattagaatgcacatgatgggtaaacgagttaactttgctgctcgttcggtcatcaca
cctgaccccaatttaaacatagatgaaattggaattcctgagaccttcgcattgaaatta
acatacccaacacctgttacaccttggaacgttgtacacctacgccagttagttttaaat
ggtcctgatgtttatcctggtgcagtactgattgaaaatgaagatggacgtatacaacgc
atctccccagacgatgctgttcaaagagaagctactgcaaagcgtcttttaacgaccagt
gacagagcgaacaaattctttaaaggtataaaaattgtacatagacatttacaaaacgga
gacatcttactgctgaatcgtcagccaactttgcataaacctagtataatggcccataaa
gcgcgcattctaaaaggagagaaaacgctgcgccttcattacgctaattgcaaagcttac
aacgctgacttcgatggcgacgaaatgaatgcgcattttccacaaaatgaacttgccaga
agcgaaggatataatatagcgcatgtacctaatcagtaccttgtaccaaaggatggtaca
ccgttaagtggtctcatccaagatcacatgatttctggcgtacgtctaaccgtaagggga
acatttttcaccaagcaagattacatgcaattggtctacgctgctttgtcaacgattcag
gaaaacatagttcttcttccacctagtattataaaaccggaacctctatggtctgggaaa
cagattgtatctactgttattattaacatcataccaccgaatcaagcgcgtatcaattta
acgtcgaacgccaagatcaacgcaaaagagtggcagactggaaaggcgcgacgttggaaa
tgcggtactgaattttcagatccaaaaacaatgtcggaagccgaagtaattatacgaaac
ggagaattattgtgtggtgtactcgataaaacacattacggtgctaccccgttcggtctt
atacactgcgtatttgaactgtacggtggagtctgctccacaacgttgctaagtgctttg
ggtaaactgtttcaagctggattgcaaaggaacggcttcacacttggtatcgaagacatc
ttattagtaaagaaggcagacaagaaacgcaaagaaattatttcagagtgcagacagatt
ggagagagtgtccagaagtctatactagagttacctgaagatacaccaatggatgtggtc
tcagctaagatggaagaatcttattggagtaatccaaaattccgtacacaggtggacaga
aaatacaaaagtgcgttagacgtgtacactaatgatataaacaaggcgtgtttaccagct
ggtcttctaaaaaaattcccacataataacttgcaattgatggtacaatctggtgcgaag
ggctcaactgtaaatactatgcagatatcatgtttattgggacaaattgaattggaagga
aaaagaccacctttaatgataagcggaaaaagtcttccaagctttcctgcttatgaccca
acgccaagagcgggcggtttcattgatggtagatttatgacagggattaaaccacaagaa
ttcttttttcactgcatggctggccgtgaaggtctcattgatacagctgtaaagaccagc
agatcaggatatctacaacgatgtcttatcaagcatcttgaaggattagttatcaattac
gactcaacggtacgtgattcagacggtagtttagtgcagatttattatggggaagatgga
cttgacataccaggttcaagattcttaaaaaaagaacaaatcgacttcttggtgcacaat
agagatgctattattaacaaacagattatcgaaagtctgaaagaagattctgatacgagt
aaaattttgaagctagccaagaaaattaaaaaatgggagagtaagaatggccatgcgtta
cagaagaggagaattagccctttcacaaaattctctgcacagcctgtaaagattaaagcc
gcaaagttcaaggaaattgatgaaaacagtggaagaagtaaagctgcactttcgctcatg
agaaagtggataagagcacccgaagaagaaaaagatgctatttatgcgcaatgtgttaga
tgtcctgatccgataacgtcgcattacagacaagatgtagatttcggtgtactgtctgag
cgactggagcatttaatagacgaatatattgctaataaatctacagagtctccaataaaa
cggagcgacttaagggatcttttatccatgaaggtgatgaagattgtttgtccacctggt
gaacctgtaggtttattagcagcacagtcaatcggcgagccatccactcagatgacactg
aacactttccattttgctggtcgtggagagatgaacgtcactctgggtatacccaggcta
cgtgaaatactcatgatggcatccaaaagcattaaaacacccagcatggaaatacccttc
aagaaggacttgaaaaatatatcaaagcggtctaataaactgagactaaaactgactaag
tgtgttttagcaaatattttaaataacatcaccatagacaggaaaatggaacagtggcca
gatagacgattggtgcatacaatgaccctacagtttttcccatacaaagcgtataaaggg
gaattttgcattcaaccgcatgatgcactgaaaaaggcggaagaagtatttttcaaggca
ctgtttagggaaattaaaaaagttgccaaagtgacaggtgccttgttacacattgaggaa
gagaagaagtctaccaatgatgatgatgctctgttggatcaaactgaaccggatgagagg
ccatcgttgaaatcacgatcaaacttaggagaaatgcatgagtcctcggatgaggatgaa
gcagcggaagacgcggacgcgacattgactcgatcgatttctcgacatagagaaaatcaa
gaatatgaagacccggaggaagaggaggtagatgatgtaaatgataaagatgatgacact
actgttgaaaataatgaaagctcagaccgtatggaagaccaacaaaatggggatggagat
gaagacattgaaggtgagaaatcggatgatgtgagtgaaatatacaacaaacaaagaaga
agagatataacaaacatgtatcatcatgcaatagagtatgactacgacgaagaaaaatac
tcgtggtgtaaattaacattttggctgccacttaaaatgataaaactggacttgccaaca
atcattagaaacgttgcgaacagagttgttttatgggaagtaccatgtataaaacgagct
tttacattccaaaataatgatggagaaactgtcctcaaaactgatggtataaatataata
gaaatgtttaaatacgacaggtcattagatttgaataaattgtattccaatgatatttat
ggtatctcccaaacatatggtattgaagcagccaacagagttattgtaaaagaagtgaag
gatgtgttcaaagtatatggtattacggttgactctcgtcatttgtcgttaattgcagat
tatatgacattcgatggtagatttcaacctctcagtcgaaaaggaatggaagattctgca
tctcctttacaacaaatgagctttgaaagttcccttaatttcttaaaacatgctacatta
caaggaaaacaagacaatttggtatctccttctagtcgattaatgttaggccagccttgc
aaatctggtactggagcctgtgcactattactaaaaatgcaaaaacaaccagaggttact
ttgtcggtagacgcataa
DBGET
integrated database retrieval system
