Nomia melanderi (Alkali bee): 116433916
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Entry
116433916 CDS
T07404
Name
(RefSeq) probable histone-binding protein Caf1 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea03082
ATP-dependent chromatin remodeling
nmea03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116433916
03083 Polycomb repressive complex
116433916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nmea03036
]
116433916
Chromosome and associated proteins [BR:
nmea03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
116433916
Histone modification proteins
HAT complexes
HATB complex
116433916
HDAC complexes
Sin3A-HDAC complex
116433916
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
116433916
PRC2.2
116433916
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
116433916
Heterochromatin formation proteins
Other heterochromatin formation proteins
116433916
Chromatin remodeling factors
NuRD complex
116433916
NuRF complex
116433916
NuRF complex (fruit fly)
116433916
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
EIF3I
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF12
WD40_RFWD3
Beta-prop_WDR19_1st
ANAPC4_WD40
eIF2A
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
MIOS_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
116433916
NCBI-ProteinID:
XP_031848422
LinkDB
All DBs
Position
Unknown
AA seq
431 aa
AA seq
DB search
MISRLYIMAKETFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTR
PEGKDYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNEKGEFGGFGSVSGKI
EIEIKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPDPNGECQPDLRLRG
HQKEGYGLSWNPNLNGYLLSASDDHTICLWDINAPPKENRVIDAKTIFTGHTAVVEDVAW
HLLHESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD
KTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQS
SEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPD
TPASELEAGAS
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcaggttatatatcatggcaaaggagactttcgacgatgctgtagaggaaaga
gttattaacgaagaatacaaaatatggaaaaaaaatacaccctttttgtacgatcttgta
atgacacatgccctcgagtggccatccttgaccgcccaatggctacccgatgtaactaga
ccagaggggaaagattactccgtacaccgccttatattgggtacgcatacctccgacgaa
cagaatcatttgctaatcgctagcgttcaactgccaaacgaagatgctcaattcgacgcg
tctcattacgacaatgagaagggggaatttggcggattcgggtctgttagcgggaagatt
gaaatcgaaataaagataaaccacgaaggggaagtgaacagagcacggtacatgccgcaa
aatccgtgtgtcatcgcaactaaaacgccatccagcgatgttctcgtgttcgattacacg
aaacatcctagtaaaccagacccgaatggcgaatgtcaacctgatctgagattgagagga
catcagaaggaagggtacggtctatcgtggaatcctaatttgaacggatatctgctaagc
gcatccgacgaccatacgatttgcctgtgggacattaacgcaccgccaaaagaaaatcga
gttatcgatgcgaaaactatatttacaggacacaccgctgtcgtcgaagacgtggcttgg
catttgttacacgaatctttgttcggttcagttgcggacgatcaaaagttaatgatctgg
gacacaaggtgtaacaacacgagtaagccaagccatactgtcgacgctcacacagccgaa
gtgaattgtttaagtttcaatccgtattcagaatttatccttgcgaccggcagcgccgat
aaaacggtggcactctgggacttgagaaatctcaagctgaaactacattccttcgaatct
cacaaggacgagatctttcaagttcaatggtcaccgcacaacgagactatattagctagt
agcggtacagacagacgtctacacgtatgggatctgagtaaaattggcgaagagcaatct
agcgaggatgcagaggacggtccacccgagttattgtttatacatggtggtcacaccgcg
aagatcagcgacttctcatggaatccaaacgaaccatgggtgatatgttcagtgtcggaa
gacaatataatgcaagtatggcaaatggcggaaaacatttacaacgacgaagaaccagat
acgccagcgagcgaacttgaagcgggtgcttcataa
DBGET
integrated database retrieval system
