Nomia melanderi (Alkali bee): 116433960
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Entry
116433960 CDS
T07404
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
nmea
Nomia melanderi (Alkali bee)
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmea03019
]
116433960
03036 Chromosome and associated proteins [BR:
nmea03036
]
116433960
Messenger RNA biogenesis [BR:
nmea03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
116433960
Chromosome and associated proteins [BR:
nmea03036
]
Eukaryotic type
Gene silencing
piRNA pathway
116433960
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
M_domain
RRM_1
UBA
Motif
Other DBs
NCBI-GeneID:
116433960
NCBI-ProteinID:
XP_031848495
LinkDB
All DBs
Position
Unknown
AA seq
2342 aa
AA seq
DB search
MDGGAVAMRLRAHWNYNPLTMNSSFDGLLLQKRLLSAPQIEHLRIMKMFLTNNQIASSKH
SSIACIFGIIKIPQEFVSNYFKDAWRESCVTRISLIAVSLKNVNSPTYKLSKMFADHTPS
TEIQPEILKFLSTYLFLKDESRLPFNVETIKILLTLTIKGIQTPKKHVKELNLLSFELLG
RSLRILDKILLRSTVSKANTSSTMIEFFLMEINAMKKKEEKEKKGNEEEEQEEDEEKEEE
KQQKRKEMLQNIMTINIDISFINNNIALASIEEICKEISKSPLNFVILKKVKISDRSSNE
ESDLITTKGDNVATSSSITLIVPGNELTDQPPRPLPLRNALNRAQSSPPWLDLVASELTQ
RACVPLSLDRKLYVVKLSCKVICDFSIMWKGIPSHETSYKTTHPNVQLLSISSMVKNWKK
LAFNVQHCMTVNEAKRNIETDYRTVVYYNTKIIVISQRNSLMGAMAIHRTIWNPKNANFC
TLFSKMLTAGRDVSSTSTDQNSTFLLTAETLMKKRVNRMSTSGRNLTGNAESVFLLMNKF
RRMYPILTTSKKEYPNAWSMIRTSETMTFDLTRETMVEMLSWGINGISDVATITVGALLF
QDNVKSNEPTGAYFVNYRYSVPYMRVGTEFVKSLSKSTIGDRFSVKGENQAEFALYIPTT
TTCKPTMTLKRQSASRLIGVPGSRPNYFKTLWPDQMHTPHDFYDSLLNCRTGYRNDSLPE
GEHEEYSSGCFDCFNEQTLREDANKSVADTNQVRTIKSLTAIYSKDDHYHKMIRVFRFRG
PEKTTNCQDTTRKSIERNVSICSSCSSSLKRTKQGYQAFTDAVMTMNNISLANFCDLYLF
KEMYKLRKPIGFNTAENSFPRYPMHSDHHALINLTFQTAQFVDNEDSRDNYRKLTKMNAI
VVNRYGDSENSDRCRDCFQNSRDSVESPIISAQSEEEIMYTQNSVPNRFESEGTFTNSSN
RNHLIDRARNLIAAFAGASNDALLQARKNDLKRVLTLLFGPVYDVGEPNLGYKKRWGISS
ILRLAGGGESSLNNGGSASWGSTQASTTNNNNSNQSAWGGTSGNPSGNGGNSGNWSGSNV
NRSVSGNPNSNQNTVPLGGQNVPGNVNKMNNPNQQSNQQSGPPTSQSSGTNQGGQNNNQW
SQGMSNNPGGPGQNPSIPNNNNTVQQQQQQQQQSNSNSNNNQPNNQGQGSVNSSNTPASN
NPSTKQQLEQLNTMREALFSQDGWGRQHVNQDTNWDVPTTPEPNSSKDGVPVWKPPVNTG
TDLWEANIRNGGQPPSQQQPKTPWGHTPATNIGGTWGEDDEATDSSNMWTGAPTSSQPNT
AAGQWTTGTGNQAGMWGGSNWGDPRIDHRDPRDLRSVDPREIRDPRDHRMSLDPQEHIRA
IHPMARDPRMADMRGDPRGISGRLNGTNADTMWGQPPGPPHHQMGHQHPSGPPTKMLNPS
SINQWAAPPPKDIMPGKPSGWEEPSPPTQRRNVPNYDDGTSLWGNAATNQRAIPGSKVAH
WKDLPTPNVARGGTQCPPGMPQNRMPGQPGMKPDVSGPMWGHPGAPGGRNGSWTEGPHDA
GSWDDPKTPSTWNEAQLNPGTWGGPSAHKPKPMGPTGSWGDTDMDHSPSWGHPTKPILTK
EVIWSSREFRYLCDLGFKKDDVELALRNREMNRDEALELLSQVRPLDQWRRHDAHSTYDP
SNQATTAPAYPRFNHVAQQMSFPPGAGVASGNTTGSVGGSVASASLLKLQQQQQQAAVPL
QQQQPSGNAPQPPFNQPSRTPQNQPSTQQLRMLVQQIQLAVQEGYLNHQILNQPLAPQTL
ILLNQLLQQIKVLQQLHQQHSVQSTMKGNGQSVLQISVQITKTKQQIANLQNQIAVQQAT
YMKQQQQQQQQQQQQQQQQQQQQQQQHPAPPSQSSEYYKSSVHDPMSALQNSFTELTMNK
EPPISQQQSRLNQWKLPSLDKDGELVSNEFSRAPGTTSKPAVSSAGLTQSHSSPNMNPLL
GQGDGTWSTRLGESGWPDPGNTDSTDGKDWQPTGAATFTDLVPEFEPGKPWKMKSIEDDP
SITPGSVVRSPLSLATIKDPDAIFNLSSKTSPPPPQQPTNLDTSIPSLSNSTWTFNPPAT
TPSAFTSSKNTWGESAPPPTAVTSELWGAPISKVRGPPPGLSTKAAGNTSNGWTGLGTVG
RSSSSWGLQSSANAGWVSTWLLLKNLTPQIDGSTLKTLCMQHGPVLDFRLFLNHGIALTK
YSTRDEAVKAQGALNNCVLGNTTIFAEYPADSEVHTLLQQLGHGGQQQAGATAGAGWGLR
PSNKSGPPPDTWGGSSSQLWGAPPSSNSLWSNTSIDNNDQQRATPSSLNSYLPGDLLGGE
SM
NT seq
7029 nt
NT seq
+upstream
nt +downstream
nt
atggacggtggtgcggtcgcaatgagactaagagcccattggaattataacccattaacg
atgaactcttctttcgacggtttattgttacaaaaacgattgctttctgcgccgcagatc
gaacaccttagaattatgaaaatgttcttgacgaataatcaaattgcttcgagcaagcat
tcctcgatagcatgcatcttcggaattattaagataccacaggagtttgtgtcgaactat
tttaaagacgcctggagagaatcttgtgtgacacgtatatcattaatcgcagttagtctg
aagaatgtgaattctccgacgtacaagttatcaaaaatgtttgcagaccatactccttca
accgaaattcaaccggaaattctgaaatttctatccacatatctatttttgaaagacgaa
tctcgccttccgtttaacgtagaaacgataaagatattactgacgcttactataaagggc
atacagacacctaagaaacacgttaaagaactaaatctcctctcattcgaactactcgga
aggtcattacgtatccttgacaagattttgttgagaagtactgtttcaaaagcgaacact
tcgtccacaatgatcgaattttttctcatggaaatcaacgctatgaagaagaaggaggag
aaggagaagaaggggaatgaagaagaggaacaagaggaagacgaggaaaaagaagaagag
aagcagcaaaagaggaaggaaatgttgcaaaatattatgacgatcaatatcgatatatcg
tttataaacaataatattgcattagcaagcattgaagaaatctgtaaagaaatatcaaag
tcgcctttaaatttcgtaatactaaagaaagttaaaataagtgatagatcgtcgaacgaa
gaatcagatttgataactacgaaaggagataatgtggccaccagttcttccattacgctt
atcgttcccggaaacgagctaactgaccagcctccgcgacctctcccgttgagaaacgcg
ctgaaccgcgcacaatcctctcctccatggctcgacctggtcgcgagcgagctgacgcaa
cgtgcatgtgttccactctcgttagatcgtaagctttatgtggttaaacttagctgtaag
gtgatttgcgactttagtattatgtggaaggggataccgagccacgagactagctacaaa
acgacgcatcccaatgtccaactcttgagtatttcttcgatggtgaaaaactggaagaaa
ttggcctttaacgtacaacattgtatgactgtgaacgaagcgaagcgaaacattgaaacg
gattatcgaactgtcgtttattataatactaaaataatcgtgatttctcaaaggaattcg
ttgatgggtgctatggcaatccatcgtacaatttggaacccaaagaatgcaaatttctgt
actctcttctctaaaatgctcacagctggaagagacgtgagttcgacctcgacggatcaa
aattcgacgtttttattgactgcggagactttgatgaagaagcgagtcaacaggatgtcc
acatctggcagaaaccttacaggcaatgccgagtctgtgttcctgttgatgaacaaattt
agaagaatgtatccgatacttacgacctcgaagaaagaatatccaaatgcttggtctatg
ataagaacctcagaaacaatgactttcgacttgacgagggaaacaatggtagagatgttg
tcctggggaattaacggtattagtgacgtggcaacaattactgttggtgctcttttattt
caggataatgttaagtctaacgagcctacgggcgcttatttcgtgaactataggtactcg
gtgccgtatatgcgtgttggcaccgagtttgttaagtctctttctaagtctactataggg
gatagatttagtgttaagggggagaaccaagccgagttcgctctctacattcctactacg
actacctgcaagcctacgatgacgcttaaacgccaatctgcatcccgattaatcggtgta
cctggatctcggccgaactacttcaaaacattatggcccgaccaaatgcatactcctcac
gatttttatgacagtctactgaactgtagaacgggatatcgcaatgattctcttccagag
ggtgaacacgaagaatattcttcaggatgtttcgactgctttaacgaacaaaccctgcgt
gaagacgcaaacaaatctgttgccgatactaatcaagtaagaacgatcaaatctctaact
gctatctattcgaaagatgatcattatcacaaaatgataagggtattccgttttcgtgga
cctgagaaaactactaattgccaagatacgacgcgcaagtcaatagaaagaaatgtttct
atttgttcatcgtgctctagttcactgaaacgaaccaaacaaggatatcaagcttttacc
gacgcggtgatgacgatgaataacatttctttagcgaatttctgtgatttatatctattt
aaagagatgtacaaactacgcaaacctatcggatttaacactgcggagaatagttttccg
agatatccgatgcattctgatcaccatgctttaatcaatttgaccttccaaactgcccaa
ttcgttgacaatgaagattctcgtgacaattatcggaaactgacgaagatgaatgccatt
gtagtaaaccgatacggtgattctgagaattctgatagatgtcgggactgttttcagaat
agccgagattctgtcgagagtccaataatttcggctcaatcggaagaggaaatcatgtat
acgcagaactcggttcctaatcgtttcgaaagcgaaggaacatttacaaacagctcaaac
cgaaatcatcttattgatcgtgcaaggaatctcatagcagcattcgcaggagcctctaat
gatgctttactgcaggctcgcaaaaatgatcttaagcgtgtattgactctcctgtttgga
ccagtttacgatgtgggagagcctaatttaggatataaaaagcgatggggcatttccagc
attcttagattagctggcggcggtgaaagttcattgaacaacggtggatctgcaagttgg
ggatctacacaggctagcactacaaataacaataatagcaatcaatctgcatggggaggg
acgtcaggaaacccttccgggaatggtggcaattctggaaattggtctggaagtaatgtg
aacagatctgtcagcggcaatcccaattcgaatcagaatacggtgccactcggtgggcaa
aacgttccaggtaatgtgaacaagatgaataatccgaatcagcaatcaaatcagcaatct
ggtccacctacttctcaatcaagcggcacaaatcagggtggtcaaaacaataatcagtgg
tcgcaagggatgtccaacaatcctggaggacctggccaaaatccttctattccaaataat
aataatacagtccagcagcaacagcaacaacagcaacagtcaaactccaatagcaataat
aatcaaccaaataatcagggtcagggatccgttaacagtagtaatacccctgctagcaat
aatccttcgacgaaacagcaattggagcagttgaacacaatgagggaagcgttatttagt
caagatggttggggccgtcaacacgttaatcaagatacaaactgggacgttccaactact
ccagagcctaattcctctaaagatggagttccagtgtggaaaccaccagtaaataccggt
acagacttatgggaagctaatattagaaatggcggtcaaccaccatctcaacaacaacca
aaaactccttggggtcatactccagcaacaaatattggcgggacttggggtgaagatgat
gaagctaccgattcatcaaatatgtggactggggctcctacatcttctcagccgaacact
gctgctggccaatggacaacgggcaccggtaatcaagccggtatgtggggaggatccaat
tggggagacccaagaatcgaccatcgagatccccgagatctacgttccgttgatccccga
gagatacgagatccccgtgatcacagaatgtctttggaccctcaagaacatatacgtgca
atacatccaatggctcgggatcctaggatggcagacatgcgaggagatccacgaggtatt
tctgggagattaaatggcacaaatgcggatactatgtggggtcaacctccaggacctccg
caccaccaaatgggacatcaacacccttctggccctccaacaaaaatgttgaatccctcc
agtataaatcagtgggctgctccgccaccaaaagatattatgccgggcaaaccatcaggt
tgggaagaaccttctccgccgacgcaaaggaggaacgttccgaattatgacgatggcacc
agtttatggggtaatgctgcaactaatcaaagggctatccctggaagtaaagttgctcat
tggaaggatcttccaacgccaaatgttgcgagaggaggtacgcagtgccctccaggcatg
ccacaaaaccgaatgccaggtcagcctggaatgaaaccagatgtaagtggaccaatgtgg
ggtcaccctggtgcccctggtggacgaaatggtagctggacagaaggaccacacgatgca
ggttcatgggatgacccaaagacaccgagtacttggaatgaagcacagttgaaccctggt
acttggggtggacctagtgcgcacaaacccaaaccgatgggacctactggaagctggggt
gatactgatatggatcattctcctagttggggtcatcctacaaaacctattcttacgaag
gaagtcatatggagtagtagagaattccgatatctctgcgatttaggctttaaaaaagat
gatgttgaattagcattgaggaatcgcgaaatgaatagagacgaagctttggaacttctg
agtcaggtgcggccgttagatcagtggagaagacatgacgcacactccacttatgatcca
agcaatcaagctacaactgcaccagcatatcctagatttaatcacgtcgcacaacagatg
tctttcccgccgggtgctggtgtggcaagtggaaacacaactggtagtgtaggagggtcg
gttgctagtgcaagtttgttgaaattacaacaacagcaacaacaagctgctgttccttta
caacaacaacaacctagtggtaatgcacctcaaccacctttcaatcagccttctagaact
cctcagaatcaaccgagtactcaacagctgcgtatgttagtgcaacaaattcagttagcc
gtccaggaaggttacttaaaccatcaaattctaaatcaacctcttgcacctcaaacttta
atacttttgaaccaattattgcaacaaatcaaagttctgcagcaacttcatcagcagcat
tcggtacagagtactatgaagggtaacggccaatcagttcttcagatcagtgtacaaata
actaaaaccaaacagcaaatagcaaatcttcaaaatcaaattgctgtgcaacaagctact
tatatgaagcagcagcaacaacagcaacagcagcagcaacagcagcagcagcaacagcag
cagcaacaacaacaacaacatcctgctccaccatctcagagttcggaatactacaagagt
tctgtacatgaccctatgtcagctttacaaaacagtttcacagaattaacaatgaacaag
gagcctcctatcagtcaacaacagtcaagactgaaccagtggaagttaccttcattggac
aaggatggggagttagtttcgaatgaattctcaagagcacctggaactaccagtaagcca
gcagtttcatcggctggtttgacacaatcacacagtagtcctaacatgaatcctttgttg
ggtcaaggagatggtacatggtccaccaggctcggagagagcggatggcccgatccaggt
aatacggactctaccgatggaaaggattggcaaccaactggtgcagctacattcactgac
cttgtacctgagtttgagcccggcaaaccatggaagatgaagagcatcgaggatgatcca
agtattactcccggttctgtagtccgttcacctctgtccttggctacaatcaaagatcca
gatgctatattcaatttaagtagcaagacatcaccaccgccaccgcaacaacctactaac
cttgatacatcaataccaagtttgagcaactctacatggacgtttaatccgccagctact
acccctagtgcatttaccagttctaaaaatacttggggtgagtctgcaccaccgccaact
gcggtcacttcagaactgtggggtgcgccgattagcaaagttcgtggtcctcctcctggt
ctaagcaccaaagctgcaggaaatacaagcaacggttggacaggccttggaactgttggt
agatcatccagctcttggggccttcaatcgagcgcaaacgctggctgggtgtccacttgg
ttattactgaagaatctaacgcctcaaattgatggttcaaccttgaaaactctttgtatg
caacacggccctgttttggacttccgattattccttaatcatggaattgcattaaccaag
tactccacaagagatgaagccgttaaggcacaaggagctctgaacaattgcgtcctgggc
aacacaactatattcgcagaataccccgctgatagcgaggtacatacattgctgcaacaa
ttgggtcatggtggtcagcagcaagctggagcaacagcaggtgccggctggggcttgcga
ccttcgaataaaagcggtccccctcctgatacttggggcggcagttccagtcaactatgg
ggtgctccgccaagcagtaactccctctggagcaacactagcatcgacaacaacgatcaa
caacgtgctacgcccagttctctgaactcgtacttacccggagaccttctgggaggtgag
tcgatgtag
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integrated database retrieval system
