Nomia melanderi (Alkali bee): 116434147
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Entry
116434147 CDS
T07404
Name
(RefSeq) hypoxia-inducible factor 3-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea04137
Mitophagy - animal
nmea04140
Autophagy - animal
nmea04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
116434147
04137 Mitophagy - animal
116434147
04148 Efferocytosis
116434147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nmea03000
]
116434147
Transcription factors [BR:
nmea03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
116434147
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS
PAS_3
PAS_11
PAS_9
PAS_4
HLH
PAS_2
Motif
Other DBs
NCBI-GeneID:
116434147
NCBI-ProteinID:
XP_031848745
LinkDB
All DBs
Position
Unknown
AA seq
1109 aa
AA seq
DB search
MEPPKKEKKHKEKRRSNEKRKEKSRDAARYRRSKETDIFTELATALPLSQDQAAHLDKAS
VMRLAIAYLKVRSVVQSMPAPLAKSETSTQMDKLFSEALNGFMLVLSSDGNMVYLSENVS
DYLGISQMDMMGQSVYEYSHPCDHDELRECLSSKPLESNEKRCCSFFLRLKCTLTSKGRK
VNLKSASYKVIHCTGRLTYIREPVQHTPDTDEKDRKSEEDEGEHDTGASLVLVGCPIPHP
SNIEIPLGRHTFLSKHTLSMKFTYADEKLAEYLGWKSEELMGQSVFEFYHALDNLALDKS
FKSLFSKGQCETVAYRFLGKRGGYAWVVTQATLIHCTKQQKPLSVVCVNYILSGVEREDE
VYSARQLAARDTEKSLVKPEKKKLLPSVCEAAVQPATKLRLQVQVTETGNLEEPAVDPPK
PKNAQQQQQQRQDHRESVDRAKPLAVTTSTFRAAGQGVKKEPAGLRDGSRKDNTFPRPVR
DAEKSFVGVQALKESLEESLKENDQPKRKKINPRPTNRPPFIFQGKPALEYDPESTVRRE
RPQAVTRQLFVPISPQQQQQQQQEQITCRPPPQTATASIFAPRTKDMNKGFLTFSEDHPG
LTMLKDEPEDLTHLAPTPGDVCVPLEDTPFLSDMLDEFILGNDNYCPLLSPSAGLATELR
STDFGDPLKDTDLGDTSRNKGLGESLADSDPFMYGDSPSSPCSIDPNSVSPSLVKYRQQS
PERSMDSLGSPTGGSGAEGLSEDEMLMLGLSDSIADDELALRAPYIPMSDQDEALDLLIS
DDMVMWSPPQTTEKNCPKWMLDEKEQRMTDSSLAQLLKTDQVVSRKYNDHGGGLVNPVQV
LGQIPRKSASLDASHWSSKLDRPSKRIHTASLDTGTENKRLKCDESSRRGSPLSLEDHLL
GKQHQQSPRKPANMNGSQLLRRLVSQQTVQRSSGSYNGESYTNSPRRGENPGRMQRDLEM
DEAEGDSGGGGNEDGGGSGTRLPPERTSPGCSSVLMNLLVSGCDDNLMESRNVPTALPKS
LTMPLSVNLENQMVPQCPPSGGSTGSYDDLSPDPGKQLSGSFIGEGPLVSPSSSMINFEN
YDYDPSLTSSGLLQVQPDLFGTLLDRDLV
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atggagccaccgaaaaaagagaagaaacacaaggagaaaagaaggagtaacgagaagagg
aaggagaagtcccgagatgccgcgcggtaccgtcgcagcaaggagacggacatattcacg
gaattggcgaccgcgcttccgctctcccaggaccaggccgcgcacttggacaaagctagc
gtgatgaggctagccatcgcttatctgaaagtgcgctcggttgtccagtccatgccagct
ccactggccaagtccgagacatcgacccagatggacaagctgttctccgaggcgctgaac
ggtttcatgctggtgctgtccagcgatgggaacatggtctatctttcggagaacgtgagc
gactacctgggcatttcgcagatggacatgatgggtcagagcgtgtacgagtacagtcat
ccgtgcgatcacgacgagctgcgcgagtgcctctcctcaaagccgctggagagcaacgag
aagcgttgctgcagcttcttcctgcggctcaagtgcacgctgaccagcaaagggaggaag
gtgaacttgaagagcgcttcgtacaaggtgatccactgcaccggcagattgacgtacatt
cgcgagcccgtgcagcacacgccggataccgacgagaaggatcgcaagagcgaggaagac
gaaggcgagcacgacactggcgcctcattggtgctcgtcggatgccccattccgcatccc
agtaacatagaaatccctctgggccgccacaccttcctctcgaagcacaccctcagcatg
aagttcacctacgccgacgaaaagttggccgagtatcttggctggaagagcgaggagctg
atggggcagtctgttttcgagttctatcacgccctcgacaatctggccctggacaaatct
tttaaatcactgttcagcaagggtcagtgcgagaccgtggcgtacagattcctcggcaaa
cgcggaggatacgcttgggtggtgacccaagccacgctgatccactgcaccaagcaacag
aaaccgctgtccgtcgtctgcgtgaattacatcttaagcggcgtggagcgcgaggatgag
gtgtacagcgcgcgtcaactggcagcacgtgacaccgagaagagtctcgtgaagccggag
aagaagaagctgctgccgagcgtctgcgaagcagccgtgcagccggccacgaagctccgg
ctccaggtgcaggtgaccgagactggaaatctcgaggagcccgcggtcgacccgccgaag
ccgaagaacgcgcagcagcagcagcagcagcggcaggatcaccgggaatcggtggacagg
gcgaaaccgttggcagtcacgacctcgacgttccgcgcggcgggccagggcgtgaaaaag
gagccggcagggctccgggacggctcgcggaaggataacaccttcccgagaccggtccgc
gacgcagagaaatcgttcgtcggcgtgcaagcgctcaaggagtcgctcgaggagtcgctc
aaggagaacgaccagccgaaacggaagaagatcaatccgcgaccgaccaatcgtcctccg
ttcatcttccagggcaagcccgcgttggaatacgatccggagagcacagtccgtcgcgag
cggccacaggccgtcaccagacaattgttcgtgccgatctcgccgcagcaacagcaacag
cagcaacaggaacagatcacttgcagaccaccgccccagactgcgacagccagcattttc
gcgcctcgtaccaaggacatgaacaagggcttcttgacatttagcgaggatcatccaggt
cttaccatgttgaaggacgaaccggaggacttgacgcatctggcgcccacacccggcgac
gtgtgcgtgcccctcgaagacacgcctttcctctccgacatgctcgacgagttcatcctc
ggcaacgacaactattgccctctcctgagccccagcgccggcctcgccacggaactacgc
tcgacggatttcggcgacccgctgaaggacaccgacctcggggacacctcgaggaacaag
ggcctcggagagtcgctggccgacagcgacccgttcatgtacggcgactcgccgagcagc
ccgtgcagcatcgatccgaactccgtctcgccgtccctcgttaaataccgtcaacagagc
ccagaacgaagtatggattccctgggcagcccgacgggcggcagcggcgcggaaggcctc
tccgaagacgagatgctgatgctgggcctgagcgacagcatagcggacgacgagctggcg
ctgagggctccttacatacccatgtcggaccaagacgaagctctggacctcttgatcagc
gacgacatggtgatgtggagtccaccgcagaccacggagaagaactgtccaaaatggatg
ctagacgaaaaggagcaacgaatgaccgactcgagtttagcacagctcctgaagacggac
caggtagtctctagaaaatacaacgaccacggtggcggtctggtgaacccggttcaagtc
ctcggtcagataccgaggaaaagtgccagcctggacgcgagccactggtcctcgaagctg
gacagacccagcaaacgcatacacactgcctcgctagacacgggtaccgagaacaaacgc
ctgaagtgcgacgagtcgagtcgccgcggcagtcccctgagcctggaggaccacttgctg
ggcaagcagcaccagcagtcgccgaggaagccggcgaacatgaacggcagccagctgctc
cgtcggctggtgtcccagcagacggtccagcggagcagcggcagctacaacggcgagtcg
tacacgaacagtccccggcggggcgagaacccgggccggatgcagagggacttggagatg
gacgaggccgagggggacagcggaggcggcggaaacgaggacgggggaggcagcgggacg
cggctcccgcccgagcggacgagccccgggtgcagcagcgtgctgatgaacctgctggtg
tccggctgcgacgacaatttgatggagtcccgcaacgtgccgacggcgctgccgaagagc
ctgacgatgccgttgtccgtcaacctggagaaccaaatggtgcctcagtgccctccgtcc
ggaggatcgacagggtcgtacgacgatctgagtccggacccgggcaagcagctgtccggc
tcgttcatcggcgaaggaccactcgtgtcgccctcctcgtcgatgatcaacttcgagaac
tacgattacgatccgagcttgacgagtagcggcctgctgcaggtgcagccggacctcttc
gggaccctcttggatcgggatctcgtttaa
DBGET
integrated database retrieval system
