Nomia melanderi (Alkali bee): 116434664
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Entry
116434664 CDS
T07404
Name
(RefSeq) DNA polymerase delta catalytic subunit isoform X1
KO
K02327
DNA polymerase delta subunit 1 [EC:
2.7.7.7
]
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea03030
DNA replication
nmea03410
Base excision repair
nmea03420
Nucleotide excision repair
nmea03430
Mismatch repair
nmea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116434664
03410 Base excision repair
116434664
03420 Nucleotide excision repair
116434664
03430 Mismatch repair
116434664
03440 Homologous recombination
116434664
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmea03032
]
116434664
03400 DNA repair and recombination proteins [BR:
nmea03400
]
116434664
Enzymes [BR:
nmea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116434664
DNA replication proteins [BR:
nmea03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase delta complex
116434664
DNA repair and recombination proteins [BR:
nmea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase delta complex
116434664
MMR (mismatch excision repair)
DNA polymerase delta complex
116434664
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B
DNA_pol_B_exo1
zf-C4pol
POL3_N
REV3_N
divDNApol
Motif
Other DBs
NCBI-GeneID:
116434664
NCBI-ProteinID:
XP_031849100
LinkDB
All DBs
Position
Unknown
AA seq
1103 aa
AA seq
DB search
MNRKTFAGPSAAKKTKFRNDDDDDDFGGTFENDLANMDEMDDEFGEVSHILEEPAVVQLN
NEPKAGPEQENTSAKWSRPPPPEFNPQKDSLIFQQIEIDHYTGTPLAGMPGSKMGPVSIM
RMYGITELGNSVCCHVHGFCPYLYVSAPNNFTEAHCKPFKDALDKAVLKDMRSNPDNVQA
AILAVERVYRQNMYGFTGNTKSLFLKITVALPKLIAPCKRLLEKEVIYSELNHTYSAFES
NIDFDIRFMVDTSVVGCSWIELPPKSWKLRGHQGHNLPLTTRCQLEVDVAWDAFIAHEPE
GEWSKVAPFRILSFDIECAGRKGIFPEPNHDPVIQIANMVIRQGEPEPFLRNIFTLDVCA
PIVGSQVLSFEKESTMLEKWSDFVRQLDPDIFTGYNINNFDFPYLINRAQHLNVKNFNFL
GRIKNIKSVIKTQMLQSKQMGRRENKSINFEGRVPFDLLLVLVRDYKLRSYTLNAVSYHF
LQEQKEDVHHSIITDLQNGNPQTRRRLAVYCLKDAYLPLRLLDKLMCIIIYMEMARVTGV
SIYSLLTRGQQIKVVSQILRKIKEKDYLMPVHHGQSSEEQFEGATVIEPKRGYYNDPIAT
LDFSSLYPSIIMAHNLCYTTLMNAERQAKYKVNANDITKTPSNSSFVKANVRKGLLPEIL
EHLLSARKKAKAELKKETDPLKQKVLDGRQYALKVSANSVYGFTGAQMGKLPCLEISASV
TAYGRMMIEHTKREVEQQYCVANGYKNDAIVIYGDTDSVMIKFGVKTLEEAMELGREAAE
FVTSKFLKPIKLEFEKVYFPYLLINKKRYAGLYFTKPDKYDKMDCKGLETVRRDNCPLVA
NMMNTCLQKLLIDRNPKDAVDYAKQIISDLLRNRIDISQLVVTKELTKTDYAAKQAHVEL
AAKMKKRDAGTAPKLGDRVPYVFIRAAKGTPAYQKAEDPIYVLENNIPIDTNYYLENQLS
KPLVRIFEPILGDKAESLLLKGDHTRTKSVATSRVGALSAFTRKKEVCLGCKAVLTPERE
KMALCKYCEPREAEFYQTELYLGRQLEEKFCRLWTECQRCQGSLHQEVLCTSRDCPIFYM
RKKVQMELDTQMKRVERFGVPEW
NT seq
3312 nt
NT seq
+upstream
nt +downstream
nt
atgaataggaaaacgttcgctggcccgtccgctgcgaaaaagacgaaattccgaaacgat
gatgatgatgatgattttggtggaacatttgaaaatgatttggccaacatggatgagatg
gatgatgagtttggagaagtatcacatattcttgaagagccagctgtggtacaattaaat
aatgaaccaaaagcaggtcctgaacaagaaaatacatctgcaaagtggagtagaccacct
ccaccagaattcaatccacaaaaggattcattaatttttcaacaaatagagattgaccat
tatacaggtacaccattggctggaatgccaggcagcaaaatgggccctgtatcaataatg
aggatgtatggtatcacagaactaggaaactctgtttgttgtcatgttcatggattctgc
ccatatttgtatgtttctgcacctaacaattttacagaagctcattgcaaaccctttaag
gatgcactcgacaaagctgtactgaaagatatgagatcgaatccagacaatgttcaagca
gctattctagctgttgaacgagtgtacaggcaaaatatgtacggtttcacaggaaatacc
aaatcattatttttaaaaattacagtggctttaccaaaattaatagcgccttgtaaacga
ttactcgagaaggaagtcatctattctgaattaaatcatacgtacagtgcctttgaaagc
aacattgattttgatattagatttatggtcgatacatcagtggtaggatgttcatggata
gaattgcctccaaaaagttggaaattacgtggtcatcagggacataatttgccactgact
acaagatgtcagttagaggtggatgttgcatgggatgctttcattgctcatgaaccagag
ggtgaatggtcgaaagttgctccatttagaatactcagttttgatatcgaatgcgctgga
cgcaaaggaatcttccctgagccaaatcatgatcccgttatacaaatcgctaacatggta
ataaggcaaggagaaccagaacctttcctgcgaaatatttttacacttgatgtatgtgca
cctattgttggttcccaagttttaagttttgaaaaagagagcacaatgttggagaaatgg
tctgacttcgtaagacagttagatcctgatatttttacaggatataacataaacaatttc
gatttcccttatctcattaatcgggctcaacacttgaatgtgaaaaattttaatttcctt
ggtcgaataaagaacataaagtcggtaattaagactcagatgcttcagagtaagcaaatg
ggtcgacgtgaaaataagtcgattaattttgaaggaagagttcctttcgatttattattg
gtgctggtcagagattacaaattaagatcatacacgttgaatgcagtctcttaccacttt
ctacaagaacagaaggaagatgttcatcacagtataatcacagatttacaaaacggcaat
ccacagacacgtcgaaggcttgctgtttattgtttaaaggatgcatacttgcctttgaga
ttattggataaattgatgtgtatcatcatttatatggaaatggcaagagtcaccggagtt
tccatttatagtttactaaccagaggacaacagatcaaagtagtttctcagatactgaga
aagattaaagagaaagattacttaatgccagttcaccatggccaaagcagcgaggaacag
tttgagggtgcaacagttatagagccaaagcgtggctattataatgatcccatagctact
ctggatttcagttccctatatcccagtattattatggcgcacaatttgtgctacacgacc
ctgatgaatgcggagagacaagcgaaatataaagttaatgccaatgacataacaaaaaca
ccaagtaattcctcattcgtcaaggccaatgtcagaaaaggattgcttcctgaaattttg
gagcatctcttatcagccaggaagaaggctaaagctgaactaaagaaagaaactgatcca
ttgaagcagaaagtcctagatggtagacagtacgctttgaaagtctcagcaaactctgtg
tacggtttcaccggtgcacaaatggggaagttaccttgtttagaaatatctgctagcgtc
actgcctacgggcgaatgatgatagagcacacaaagcgggaggtggagcaacaatattgt
gtagcaaacggatacaaaaatgatgctatagtcatatacggagacactgattctgtgatg
atcaaatttggcgtgaagacactggaagaggctatggagctcggaagggaagctgcagag
tttgtgacgtccaagttcctgaaacccataaagttagaatttgagaaagtctacttcccg
tacttgttaattaacaagaaacgatacgctggcctgtatttcacgaagcctgacaaatac
gacaaaatggactgcaagggccttgaaactgtcaggagagacaactgccctttagtagca
aacatgatgaacacctgtttacagaagttactcatcgataggaatcccaaagacgccgtg
gattatgcgaaacaaatcataagtgacctcctacggaatcgcatcgacatatctcagtta
gtggtcacaaaggaattaactaaaaccgattacgcggcgaaacaagcgcacgtcgagcta
gccgcgaaaatgaagaaacgggacgcgggaaccgcgccgaaactcggcgacagagttccg
tacgtgttcataagagcagcgaaaggaactccagcctaccagaaagcagaggatccaatc
tatgtgctggaaaacaatattcccatagacacgaattattatttagagaaccaactgtcg
aaacctctcgtgcgtatcttcgagccgatacttggcgacaaagctgagtcgcttcttctg
aaaggagaccatacgcgcacgaagtcggtggccacgtccagagtcggtgctctgtctgcc
ttcactcgtaagaaggaagtttgcttaggttgcaaagctgttctaacgccggagcgagaa
aaaatggctctgtgcaaatactgcgaacccagagaggcagagttctatcagactgaatta
tatcttggcagacaactggaggagaaattctgcaggttgtggaccgagtgccagaggtgt
caggggagtcttcatcaggaagtattgtgcacaagtcgtgactgtcctatattctatatg
agaaagaaagtacaaatggaattagatactcaaatgaaacgtgtcgagagattcggagtt
ccagagtggtaa
DBGET
integrated database retrieval system
