Nomia melanderi (Alkali bee): 116434798
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Entry
116434798 CDS
T07404
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116434798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmea03021
]
116434798
03036 Chromosome and associated proteins [BR:
nmea03036
]
116434798
Transcription machinery [BR:
nmea03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116434798
Coactivators
SAGA/TFTC/STAGA complex
116434798
Chromosome and associated proteins [BR:
nmea03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
116434798
STAGA complex
116434798
TFTC complex
116434798
SAGA complex
116434798
SLIK complex
116434798
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
TFIID_NTD2
Beta-prop_EML_2
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_SPT8
Beta-prop_HPS5
PEP5_VPS11_N
WD40_like
Beta-prop_WDR35_TULP_N
DUF7165
DUF5713
Cytochrom_D1
Beta-prop_NWD2_C
WDR54
VPS8_N
Motif
Other DBs
NCBI-GeneID:
116434798
NCBI-ProteinID:
XP_031849409
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MDNEKSTMLAVLQLLRKYNLKGTEELFKKEANLTDISPDEAQQTDSEVNSVLSAYKSEGD
PALYEKAYSELKKFVEGSLDIYKHELGTILYPVLVHMYLELVYNNHSEEAKQLLEKFCGN
LEEYYQNDMKRLSNVTKREQMAGNELTDTFKSNQFIIRMSRDTLSILKRHLQEKKHSVLL
NIIQEHLYFDMYEGVARNKQQIDATSGAVVGEATRQDNKAKVYYGLLKEPDIQCMPPTEE
EEDDTGGADGDKPKKKKTKKDPLFSKKTKSDPNAPPVGRMPLPNLKDADKLEKVKALREA
SKRVVLGPDTLPSICFYTILNAVHTHSVTAAEVAEDSSLLAIGFSDSSIKVWSLVPQKLR
LMKTGEQLQDIDREADDVLVRMMDDRTAETSRTLFGHNGPVYSLSFSPDRNLLLSSSEDS
TIRLWSLHTWTCVVCYKGHLFPVWCVRFSSHGYYFATSSHDKTARLWATDSHQPLRIFAG
HYSDVDVVQFHPNSNYVATGSSDMTVRLWDCVTGSQVRLMTGHKAPIYSLAFSAEGRFLA
SAGADHRVLVWDLAHGHLVAALSSHSGTVHCLSFSRDGNILVSGSLDSTIKLWDFTKLAE
EMSLEDVNVSHNPDVKTNVDTYLLRTFATKNSPVLTLHFSRRNLLLGVGMFEST
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggacaacgaaaagagtaccatgctggcagttctacaattgctcagaaagtataattta
aagggaacagaagaattgtttaagaaagaagcaaacttgacagatatttctccagacgaa
gctcaacagactgactctgaagttaacagtgttctctctgcatataagagtgaaggagat
cctgcgctatatgagaaagcatatagtgagctaaaaaaatttgtagaaggttcattagac
atatataagcatgaattgggtactatactatacccagttttggtacatatgtatcttgaa
ttggtttataataatcattcagaagaagcgaaacagctcttggagaaattctgtggaaac
ttggaagagtattatcagaatgatatgaagagactgtctaatgttaccaaacgcgagcaa
atggctggaaatgaattaactgacacttttaaatctaatcagttcataattagaatgtcg
agggacacactttcgatattgaagaggcatttacaagagaaaaagcacagtgtgttgtta
aatattatacaagaacatctttattttgatatgtacgaaggagtagcaagaaataaacag
caaattgatgctacatcgggtgcagtagttggtgaagccacaagacaagacaataaagcc
aaagtgtattatggacttctgaaggagccagatattcaatgtatgcctccaacagaggaa
gaagaggatgatacaggtggtgcagatggggataaacctaagaaaaagaaaaccaagaaa
gatcctctattttccaagaaaaccaaatcagatccgaacgcaccacctgttgggaggatg
cctttaccaaatttaaaagacgcagataaactggagaaagtgaaagcgctcagggaagcg
tcgaagcgggttgtactgggtccagatacgttaccatctatatgtttttatacgattctg
aacgcggttcacacacatagtgtgacagcagcggaagtagccgaagattcgagtttactg
gcaattgggtttagcgattccagtataaaagtatggagcttagttccacagaaattaaga
ctgatgaagactggcgaacagttacaggatatcgacagagaagcagatgatgtattggta
agaatgatggacgaccgtacagcggagacttcaaggactttgtttgggcataacggtcct
gtgtatagtttatcgtttagcccagatagaaatcttcttctctcgtcttcagaagacagt
acaatccgactgtggtctttacacacgtggacttgcgttgtctgctacaagggacattta
ttcccagtgtggtgcgtaagattctcgtctcacggttactatttcgcgacatcctcccac
gacaaaactgccagactatgggcgactgattcccatcagcctcttcgaatatttgccggt
cattattcggatgtagatgtagtacaatttcatccaaattcgaattacgtggcgaccggt
tccagtgacatgactgtaagattatgggactgcgtaaccggtagccaagtgagattaatg
acggggcacaaagctccaatttactcccttgctttttccgcagaaggtcgttttctagcg
tcggctggagcagaccatcgcgttttagtttgggacttggcgcacggccatcttgtcgct
gccctctcaagtcattctggtaccgtgcactgcttgtcgttcagcagggacgggaatata
ttggtctcaggatcgttggactctacaatcaagttgtgggacttcaccaaactcgcagag
gagatgagtttggaagacgtgaatgtgtcgcataacccggacgtgaaaacgaacgtcgat
acctatctgcttcggactttcgcgaccaaaaattcgccggttttgacgttgcatttttcc
cgaagaaatttactcttgggcgttggaatgttcgagtccacgtaa
DBGET
integrated database retrieval system
