Nomia melanderi (Alkali bee): 116434911
Help
Entry
116434911 CDS
T07404
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10615
E3 ubiquitin-protein ligase HERC4 [EC:
2.3.2.26
]
Organism
nmea
Nomia melanderi (Alkali bee)
Pathway
nmea04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116434911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
nmea04121
]
116434911
Enzymes [BR:
nmea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116434911
Ubiquitin system [BR:
nmea04121
]
Ubiquitin ligases (E3)
HECT type E3
116434911
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
Reovirus_L2_7th
Motif
Other DBs
NCBI-GeneID:
116434911
NCBI-ProteinID:
XP_031849691
LinkDB
All DBs
Position
Unknown
AA seq
1078 aa
AA seq
DB search
METWTKKRRLASEPVIAVENSVKKLNKTMYCWGCNIHGELGLDGTEDEIILLPHEVDFVK
AGEVEQIACGENYTVVVTKDGQIYSCGNNDYGQLGHNKETRKLQLIDAPGLDAFAFKKVA
CGAHHTLAINEWGQLFSWGSNVKGQLGLNSETIMECTPRIVKALGTSVIVQVACGMKHTI
ALTNNGELYSWGCNKEGQLGLDADVKNELKPKLVNSLEGIPIVHIACGGYHSIAISKSGS
VFAWGKNSFGQLGLNDTQNRNVPCRLKTLQNTKVCYAACGEEFSVFLTVDGGVFTCGAGM
CGQLGHGNNSNEILPRQIMELMGSTVTQILCGKEHTLALVSSQSKVYAWGLGVTGQLATP
QVVQGPWVTSKASAMMDSDNEMHSSQTEYIVRHIFTGSNHCFVTVVPKKDNIQPDDCRKL
ESSYKILEITEDQLLACQRLPPSSPVDHELMTYLETVFKSQACVNGSFSLNNDHHYGCSI
KQHGVNLNEASRSFGIIRELDNSTIQELIFTCISDNLIPSFVNSSLRLHCPESLRICLIL
PLYHGFVNPLNYNLLHKPFCKAVLALKPEILEIVCQWWIKAPSHYFERLVRIHKSVVLHY
VKQSTPNKGVLWDNTFQLILDLLHLLNKLNNEGEDGNIVPYSTFHLPELVDFVDIRSDYV
KWVSEKGSYSSQKVFCRYPFLLDAQAKTILLETDQAIQMQSAMNEAATRAVMNQMFFDPF
SINTSEHIQFVMLNVSRERIVEDTLIELSHYDSSDLKKPLRVKFHGEEAEDQGGVRKEFF
MLLLKEILDPKYGMFKQYDETRVIWFSEDSFEDENMYFLIGVLCGLVIYNFIIIDLPFPL
VLYKKLLHEPVALIDIKEMSPVLVKSMQSILDYDEMDFEDVFCLNFEVVREAFGEKRIYE
LIPDGSNVPVTLKNKKQFVDLYVDYILNKSVERHFKEFYKGFHKVCGGRVLELFHSYELK
AVVVGNEDYDWEELEKNTTYKEGYTKNDPTIVLFWQVFRELSLEEKKKFLLFLTGSDRIP
IQGMKAITITIQPLNDERLLPIAHTCFNLLDLPRYQTRERLRYKLLQAIQQTHGFSLV
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atggaaacctggacaaagaaacgacgtttggcttctgagcctgttatagcagtagaaaat
tctgtaaagaaattgaacaaaacaatgtattgttgggggtgtaatatacatggggaattg
ggtttggatggtacagaagatgaaatcattttacttcctcatgaagttgattttgtaaaa
gctggagaagttgagcaaattgcatgtggtgagaattacacagtagttgttactaaagat
ggtcaaatatattcatgtggaaataatgattatggccaactcggtcataacaaggagaca
agaaaattacagctgatagatgcccctggtttagatgcatttgcatttaaaaaagtagct
tgtggagcacatcacacattagcaataaatgaatggggccagttattcagttggggctct
aatgtaaaaggtcaattaggtttaaattctgaaactattatggaatgtacaccacgtata
gtaaaagcattaggtacaagcgtaattgtacaagtagcttgcggtatgaagcacaccatt
gcattaacaaataatggtgaattgtatagttggggttgcaataaagaaggtcaacttgga
ttagatgcagatgttaaaaacgaattgaagcctaaacttgttaacagtctagaaggcatt
cctattgttcatatcgcttgtggaggatatcacagcatagctatatcaaaatcaggaagt
gtatttgcatggggtaaaaattcatttggtcagttgggcctaaatgacactcaaaacaga
aatgttccatgtcgattaaaaacactacagaatacaaaagtgtgttatgcagcctgtggg
gaagaattctctgtatttttaacagttgatggcggagtattcacttgtggtgcaggaatg
tgtggtcaattgggacatggaaataattcaaatgaaattttaccacgacaaattatggag
cttatgggtagtacagtcacacagattttatgtggaaaagaacacacattggcattagta
tcgtcacaaagtaaagtttatgcatggggattaggtgtgacaggacaattagctacacct
caagtggtgcaaggtccatgggtcacatccaaagcttctgcgatgatggattcagataat
gaaatgcattcctctcaaactgaatacatcgttagacatatttttactggcagcaatcat
tgttttgtaacagtagttccaaaaaaggataatatacaaccagatgattgcagaaaatta
gaatcatcttataaaattcttgaaataactgaggaccaattgttggcatgtcaacgttta
ccaccaagctcgcctgtcgatcatgaacttatgacatatttggagacagtatttaaaagt
caagcttgtgtgaatggatcgttctcacttaataatgatcatcactatggatgttctatt
aaacaacatggtgtgaatctcaatgaagcaagtagatcatttggaatcattagagaattg
gataatagcacaattcaagaactgatatttacttgcatatcagacaacttgattccttcc
tttgttaattcatcactcagactacattgtccggagtctttaagaatctgcttaatatta
cctttgtatcacggttttgtaaatccccttaattataatctattgcataaaccattttgc
aaagctgttttagcattaaaaccagagattcttgaaattgtatgtcaatggtggatcaaa
gcaccgtcacattattttgagagattggtgagaattcataaatcagtcgttttgcattac
gtgaaacaatctactccaaacaagggagtgttgtgggacaatacatttcaacttatatta
gatcttttacatttattgaataaattaaataatgaaggtgaagatggtaacatagtacct
tactctacgtttcatttaccagaactagtagactttgtagatattagaagcgactatgta
aaatgggtatcagaaaagggatcttattcttcccagaaagtcttttgccgctatccgttt
cttcttgatgctcaagccaagaccatactactcgaaacagaccaagctattcagatgcaa
tcagcaatgaatgaagctgcgactcgtgcagtaatgaatcaaatgtttttcgacccattt
tctataaatactagtgaacatatacaatttgtaatgttaaacgtttcacgtgagagaata
gttgaagatacattgattgaattgtctcattatgattccagtgacctaaagaaacctctt
cgagtaaaatttcatggtgaggaagcagaggaccaaggtggagttagaaaagaatttttt
atgcttttactgaaagaaattttagatccgaaatatggaatgttcaagcagtacgatgaa
actagagtaatctggttcagcgaagattcatttgaagatgaaaacatgtattttctaatt
ggcgttctttgtggactggttatttataattttattattatcgatctgccgtttccatta
gttttatataaaaaattgttacacgaaccagtcgcactgatcgatataaaggagatgtcc
ccagttcttgttaagagcatgcaaagtatattagattatgatgagatggactttgaagat
gttttttgcttgaacttcgaagtagtcagagaagcattcggcgaaaaaagaatatatgaa
cttataccagacggtagtaacgttcctgttactttaaaaaataaaaaacagttcgtagac
ttgtatgtagattacatattaaataaatcagtggaacgccattttaaagagttttacaaa
ggatttcataaagtctgcggtggtcgagtgttagaattatttcacagctatgagctaaag
gccgtagtagtaggaaatgaggattatgattgggaagaattagaaaagaatactacatat
aaagaaggctatacgaaaaatgatcctactattgtactgttttggcaagtgtttcgcgaa
ttgtctttagaggagaagaaaaaatttttattatttttaactggaagcgatagaatacct
atacagggcatgaaagcgatcacgatcacaatacaaccgttgaacgatgaacgtttattg
ccaattgctcacacgtgttttaatttgcttgatcttccacggtatcagactagagaaaga
ctacgatacaaattactacaagccatacaacaaacccatggattttctttagtgtaa
DBGET
integrated database retrieval system
