Nomia melanderi (Alkali bee): 116435130
Help
Entry
116435130 CDS
T07404
Name
(RefSeq) transcription elongation factor SPT6-like
KO
K11292
transcription elongation factor SPT6
Organism
nmea
Nomia melanderi (Alkali bee)
Brite
KEGG Orthology (KO) [BR:
nmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmea03021
]
116435130
03036 Chromosome and associated proteins [BR:
nmea03036
]
116435130
Transcription machinery [BR:
nmea03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
116435130
Chromosome and associated proteins [BR:
nmea03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
116435130
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
HHH_3
HHH_9
SH2
Spt6_S1
S1_RRP5
Tex_YqgF
Tex_N
OB_RRP5_4th
m_DGTX_Dc1a_b_c
Motif
Other DBs
NCBI-GeneID:
116435130
NCBI-ProteinID:
XP_031850226
LinkDB
All DBs
Position
Unknown
AA seq
1731 aa
AA seq
DB search
MADYLDAEAEESEEEEELDVAERKKLKRLKAMHDSDDEEDDDEDGEVDGLIDDNPIDEND
GEDSDGSDDSRKRKKSDDEDFDDRLEDEDYDLLEENLGVKVERKHRFKRLRRIQDEESEG
EQEGEVDDGRDAIANELFQGSGDEDEQKSEISHSIRVDADGYDEEESEDEDDFIVDGDGV
PIAEKRKKKKPIFSDAALQEAQDIFGIDFDYEEFERYGEDEYEEEEEEDDEYLQEEAEDR
PRRSKKHIKKKSTKKSIFEIYEPSELIRGHFTDVDNEIRTTDIPERMQIRSVPLTPTVEG
SDELDLEAEWIYKQAFCQPTISIQDAHLNEEAKERAKKGPQTIGKIKKALDFMRNQSFEV
PFISFYRKEYVLPELNINDLWKIYKFDTKWCQLKQRKQNLLKLFEKMRDFQLDEIMKNPD
APLPDNIRIIKDDDIERLKIAQTNEELNDIYRHFMLYYSQDISAMQQALHRKEKDARKKA
RIEKRKRQIAEAEENGEDPPEETFEVEDLEEEVEDTLKQPIRKGPYYLCRKAGLDGLAKK
FGLSPEHFAENLRDNYQRHEVEQEPAEPSVVANEFCSETFKTDDEVLKAVQLMVAIQLGH
EPLARKCVREMYMERAKLSVKPTKKGIKEIDENHPLYALKYVKNKPVADLVGDQFLKLVM
GEEDKLVTLTFSDVIDGNTTSNYIDEVKQLYYRDEFSKNVQDWNTLRTNSVEIALNRILI
PQLKKELRSNLLTEAKECVMKACCRKMYNWIKIAPYNCEFPDEDDDDWDTKKGIRVMGLA
YVPDQSQAAFACIISPDGECTDYLRLPHLLKRKNGFRENEKMMKEADLLAIKNFIATKKP
HVVVVSGESREALMIVSDIKECITNLVEEEQFPTIQVEICDNELSKVYSNSNRGISDFRD
YPDLLRQAISLARRLQDPLLEFSQLCTIDEEFLCLRYHPLQDQLSKDELVENLHIEFINR
VNEVGVDLNRAVQQPYTANLVQFVCGLGPRKSQSLMKILKQTNQRLENRTQLITACHMGP
KVFVNCAGFVKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAVDALEYDDEDANPAG
ALEEILESPERLKDLDLDAFAEELERQGFGNKCITLYDIRAELNSRYKDLRVLYQTPNAE
KLFDILTKETLESFYVGKLVLATVVGISHRKPQGDQLDQANPVRNDETGLWQCPFCLKND
FPELSEVWNHFDAGSCPGKATGVRLRLDNGISGYIHIKNLSDKHVTNPEERVHVGQVIHC
RIIKIEVERFSVECTSKTSDLIDKNHEWRPQKDVYYDAETEEKDKKVEEDVKKAQQRQTY
VKRVIIHPSFHNVSFAEADKLMRSMKQGEAIIRPSSKGSDHLTVTWKVTENIYQHIDVRE
EGKENAFSLGRSLWIGSEEFEDLDEIIARHVNPMASYASELLDFKYFKSTIEGIKDKGEE
IIKEQKKLNPGGIPYIVSAAKNYPGKFLLSYLPRTRCRHEYISITPDGFKFRGQMFSRLS
DLFRWFKEHFRDPIPGQITPGTPHGAVTSRTPYNSTPAISGVNPDAIQRVAQNMPHHMLH
SLSKVASQTPHHYPPHTPGAASVNNYGIYGSTPYTPSGQTPFMTPYHTPHHPQTPSNHQG
SFLQPIPPAINSNSHRPSRSQRTTSATYDNTNWTKAAEAWARSKQSTSKESDESRKTPRN
QDTRNDRESSRCRTPSARTPSYKSPRGTPFTNSSPRSMSLSGDGTPLYDES
NT seq
5196 nt
NT seq
+upstream
nt +downstream
nt
atggctgattacttagatgctgaagccgaagaaagtgaggaggaagaagagctcgatgtt
gctgagagaaagaaattaaagaggctaaaagctatgcacgatagtgacgacgaggaagat
gatgatgaagatggggaagttgatggactcattgatgataatccaatcgatgaaaatgat
ggtgaggatagtgatggatcagatgattctagaaaacgtaaaaaaagtgatgatgaagat
tttgatgaccgtttggaagatgaagattatgatttgttggaagaaaatttaggagttaaa
gttgaaaggaaacatcgttttaaacgtctccgcagaatacaagatgaagaatcagaaggt
gaacaagagggagaggtagatgatggaagagatgcaatagctaatgaattatttcaaggc
tctggggatgaggatgaacaaaaaagtgaaattagccatagtattagagttgatgcagat
ggatatgatgaagaggaaagtgaagatgaagatgattttatcgtggatggcgatggtgta
cccatagctgaaaaaagaaaaaaaaagaaacctattttttctgacgctgctttacaagaa
gcccaagatatttttggtatcgattttgattatgaagaatttgagaggtatggggaggac
gaatacgaagaggaggaagaagaagatgatgaatatcttcaggaggaagcagaagatcgt
ccaaggcgatcgaagaaacatataaagaaaaagagtacaaagaaaagtatctttgaaatc
tacgaacctagtgaacttatacgtggtcattttaccgatgtcgataacgagattcgtact
acggacattccggaacgtatgcaaatacgatctgttccacttacaccaacagtggaaggt
tcagatgaattagatcttgaagcagagtggatctacaaacaagcattctgtcaaccgacg
atttcaatacaagatgctcacttaaatgaagaagccaaagaaagagcaaagaagggtcca
caaacaattggcaagattaagaaggctctagattttatgcgtaatcagagttttgaagtt
cctttcatttcattttacagaaaggaatatgtcctgccagaattaaatattaatgatttg
tggaaaatatataaatttgacacgaaatggtgccagttgaaacaaagaaaacaaaatttg
ttgaagttgtttgaaaagatgagggacttccaattagatgaaatcatgaaaaatccggat
gctccgctacctgataatatacgaatcattaaagacgatgatatcgaacgactcaaaatc
gcccagaccaatgaagaattgaatgatatttatcggcactttatgctgtattatagtcaa
gatatatcagctatgcagcaagctctacatagaaaagagaaggatgcacgaaaaaaagct
agaattgagaaaaggaagcgacagattgcagaagccgaagaaaacggagaagatcctccg
gaagaaacatttgaggtagaagatttggaagaagaagttgaagacacattaaaacagcca
attcggaagggtccatattatctttgtaggaaggctggtttggatggcctcgctaaaaaa
tttggtctctcgcctgagcattttgctgaaaatctcagagacaattatcaacgtcacgaa
gtagaacaagaaccagcagaacctagtgtagtagctaatgaattctgttcagaaactttt
aaaacggatgatgaagtgcttaaagcagtacagttaatggtagcaattcaattaggacat
gaaccattagcccgcaagtgtgttagagaaatgtacatggaaagagcaaagttatccgtg
aaaccgacaaagaaaggaataaaagaaattgacgaaaatcatccactttatgcgctgaaa
tatgttaaaaataaacctgtagcggatcttgttggtgatcaattcttaaaattagttatg
ggagaagaagataagttggttacgctgacatttagcgacgtgatagatggaaatactact
agtaactatattgatgaagtaaagcaactgtactatagggacgagtttagtaaaaatgtg
caagactggaatacattgagaaccaatagtgttgaaatagctttaaatcgtattctaata
ccacaattaaaaaaggaactacggtccaatcttctaacagaggcaaaggaatgcgttatg
aaagcttgttgtcgcaaaatgtataattggataaaaattgccccgtacaactgtgaattt
cctgatgaggatgatgatgattgggatactaaaaaaggaattcgagtgatgggtttagct
tatgtacctgatcaatctcaagcagcgtttgcttgtataatttctccagacggagaatgc
acagattacttgagactgccacatttactgaagcgaaaaaatggttttagagaaaacgaa
aaaatgatgaaggaggctgatttattagcaattaaaaattttattgctacaaaaaaacca
cacgttgtggtagtcagcggcgaatctagagaagcattaatgatagtatctgacataaag
gaatgtattacaaatctagtagaagaagaacagtttcctacgatccaagtagagatatgt
gataatgaattaagtaaagtctattcaaacagtaatagaggtatatcagatttcagggat
tatccagatctcctgagacaagctatatccttagctagaagattacaagatccattgcta
gagttttcacaattatgtactatagatgaagaatttctgtgccttagatatcatcctttg
caagatcaactatctaaagatgagcttgttgagaatttacacatagaatttataaatcgt
gtgaatgaagtgggagtagatttaaatagagctgtccaacaaccttatactgcaaactta
gtacaatttgtatgtggtttaggacctagaaaaagtcaatcattgatgaaaattctgaaa
caaactaatcaaagattggagaatagaacacagctcataaccgcttgtcacatgggccct
aaagtatttgttaattgtgctggtttcgttaagatagatacaaatagtttaggggacagt
actgaagcatatgtagaagtgttagacggttcccgtgtgcatccagaaacgtatgaatgg
gcaagaaaaatggcagtagatgctttggagtatgatgatgaagatgcaaatcctgctgga
gctttggaagaaattcttgaatcaccagaaagattgaaggatttagatttagatgcgttt
gccgaagaattggaaagacagggctttggaaataagtgtattacactttatgacataaga
gctgaattgaattctagatacaaagatctccgcgtattataccaaaccccaaacgcagag
aaattatttgacattttaaccaaagagactcttgaatcattctatgttggtaaattagtc
ttagcaacagtagttggaataagtcataggaaaccgcaaggagatcagttagatcaggcg
aatcccgttagaaatgacgagacaggtttatggcagtgtccattctgtttgaaaaatgat
ttccctgaactgtcagaggtatggaaccacttcgatgctggatcttgtccgggaaaagcg
actggagtacgtttgagactagataatggaatatctggttatattcacataaaaaattta
tctgataaacatgtcactaacccagaagaaagggtccatgttggtcaggtgatccattgc
cgcataataaaaattgaagtggaacgattcagcgtagaatgtacaagtaaaactagtgac
cttatagacaagaatcatgagtggagaccacaaaaggatgtttactacgatgcggaaaca
gaggaaaaagataaaaaggttgaagaagatgttaaaaaagcacaacagagacaaacttat
gtaaagcgtgttataattcaccctagcttccataatgtgagctttgcagaagctgacaaa
ttgatgcgatcaatgaaacaaggagaagcgataatacggccgagtagcaaaggatccgac
cacttgacagtaacttggaaagttacagaaaatatctatcagcacattgatgtaagggaa
gaaggcaaagagaatgcattttccttaggacgcagtttatggattggcagtgaagagttt
gaagatttggatgaaattattgcaagacatgttaatccaatggcttcgtatgcttcggaa
ctcttagactttaagtactttaaatcgacaatagaaggcattaaagataaaggagaggaa
attataaaagaacagaagaaactaaatcctggcggaataccatatattgtatccgctgct
aagaattatcctggaaaatttttgctgtcgtatcttccacgaactcgttgccgtcatgaa
tatatttctataacacctgatggatttaaatttagaggtcaaatgtttagtagattgagc
gatctgttccgttggtttaaagaacatttcagggatcctataccaggccaaatcacgcct
ggtacaccccacggcgctgtaacttccagaacaccatacaatagtaccccagcaattagt
ggagtgaatccagacgctatacagagagtagctcagaatatgccacaccatatgctacat
tccctctcaaaagttgcaagtcaaactccgcatcattatccaccacatactccaggagct
gcaagtgtcaataactatggaatatacggaagtactccttatacaccttcaggccagaca
ccgttcatgactccgtaccatactccacatcatccccagacgcccagcaatcaccaaggg
tcattcttacaacctattccccctgcaattaattcaaattctcatagaccttcaagatct
cagagaactacttctgctacatatgacaatacaaactggacgaaagctgctgaagcttgg
gcgcgttcaaagcaatctacttccaaagaatctgatgaatctcgaaaaacgccacggaat
caggacactagaaacgatagagagagttcgcggtgtagaacaccgtctgctcgtacacca
tcgtataaatctcccagaggaactccatttacgaactctagtcctcgcagcatgtcccta
agcggtgacggtactcccttgtacgacgagagctga
DBGET
integrated database retrieval system
