KEGG   Nomia melanderi (Alkali bee): 116435234
Entry
116435234         CDS       T07404                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
nmea  Nomia melanderi (Alkali bee)
Pathway
nmea03030  DNA replication
nmea03410  Base excision repair
nmea03420  Nucleotide excision repair
nmea03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:nmea00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    116435234
   03410 Base excision repair
    116435234
   03420 Nucleotide excision repair
    116435234
   03430 Mismatch repair
    116435234
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nmea03032]
    116435234
   03036 Chromosome and associated proteins [BR:nmea03036]
    116435234
   03400 DNA repair and recombination proteins [BR:nmea03400]
    116435234
DNA replication proteins [BR:nmea03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    116435234
  DNA Replication Termination Factors
   ELG1-RFC complex
    116435234
Chromosome and associated proteins [BR:nmea03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    116435234
DNA repair and recombination proteins [BR:nmea03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     116435234
  Check point factors
   HRAD17(Rad24)-RFC complex
    116435234
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_14 RCF1-5-like_lid AAA_16 Rad17 Viral_helicase1 Mg_chelatase AAA_24 AAA_11 nSTAND3 AAA_19 RuvB_N AAA_assoc_2 AAA_18 AAA_28 NTPase_1 cpSF2-GREB1 DNAX_ATPase_lid ABC_tran AAA_5 MeaB RNA_helicase MipZ AAA_23 AAA_29 AAA_3 AAA_30
Other DBs
NCBI-GeneID: 116435234
NCBI-ProteinID: XP_031850483
LinkDB
Position
Unknown
AA seq 351 aa
MAGTSTGEEAMDIDIIPSTSNTNPKTKDKTDKSTHLPWIEKYRPHVFSDIVGNTDTVSRL
SVFAQHGNCPNIIISGPPGVGKTTTILCLARILLGPVFKEAVLELNASNERGIDVVRNKI
KMFAQKKVNLPKGKHKIIILDEADSMTDGAQQALRRTMEIYSNTTRFALACNNSEKIIEP
IQSRCAMLRYGKLSDAQILSKVLEVCAKENISHTDDGLSAIVFTAQGDMRQALNNLQSTY
NGFGHVNSENVFKVCDEPHPLLVKEMLEFCTDGNISKAYSVMEHLWKMGYSAEDLISNIF
RVCKNLSIEETLKLDFVKEIGITHLGIVDGINSLLQMNSLLARLCKRAIQS
NT seq 1056 nt   +upstreamnt  +downstreamnt
atggcaggtactagtaccggcgaagaagcaatggacatagatattataccatcgacaagc
aatactaatccaaaaactaaagataaaactgataaatctacacacttaccatggattgag
aaatatcgaccacatgttttttcggacatcgttgggaatacagatacagtgtctagactc
tctgtttttgcacaacatggaaattgtccaaatattattatatctggaccaccgggagtt
ggtaaaactacaacgattttatgtttagcacgtattttattagggccagtctttaaagaa
gcagtactagaactgaatgcttcaaacgaaagaggaatagatgttgtcaggaataagatc
aaaatgtttgctcagaagaaggtaaaccttccaaaaggtaaacataagataataatatta
gatgaagctgatagtatgactgatggtgcgcaacaagcattgagaagaacaatggaaata
tatagtaatacaacgagatttgcgttggcttgtaataatagtgagaaaattattgaacct
atacaatcacgttgtgccatgttgaggtatggaaagttatcggatgcacaaatattgtca
aaagttcttgaagtttgtgcaaaagaaaatatttcacatacagatgatggcctttcagca
atagtattcaccgctcaaggtgacatgagacaggccttgaataatttacaatcaacatac
aatggttttggacatgtaaatagtgaaaatgtctttaaagtttgtgatgaacctcatcct
ttacttgttaaagaaatgctagagttttgtacagatgggaacatttcaaaagcatattca
gtaatggagcatttatggaaaatgggctattctgcagaagatttaattagtaatatattc
agagtttgtaaaaacctttcaattgaagaaacattaaaattagattttgtaaaggaaatt
ggaataacacatctgggaatagtagatggaattaacagtttattacagatgaatagtctg
ttagctcgtctttgtaagagagctatacagagttga

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