Numida meleagris (helmeted guineafowl): 110387908
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Entry
110387908 CDS
T06015
Symbol
COPA
Name
(RefSeq) coatomer subunit alpha
KO
K05236
coatomer subunit alpha
Organism
nmel
Numida meleagris (helmeted guineafowl)
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nmel04131
]
110387908 (COPA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nmel04147
]
110387908 (COPA)
Membrane trafficking [BR:
nmel04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
110387908 (COPA)
Exosome [BR:
nmel04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110387908 (COPA)
Exosomal proteins of bladder cancer cells
110387908 (COPA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
TPR_COPA_B
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR75_1st
WD40_RFWD3
WD40_MABP1-WDR62_1st
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
Beta-prop_SPT8
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
110387908
NCBI-ProteinID:
XP_021232287
LinkDB
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Position
24:complement(510322..529433)
Genome browser
AA seq
1224 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWILTSLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH
KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHEYPWILSASDDQTIRVW
NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVESD
VRGITGVDLFGTTDAVVKHVLEGHDRGVNWAAFHPTMPLIVSGADDRQVKIWRMNESKAW
EVDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLAAH
PNLNLFAAGHDGGMIVFKLERERPAYAVHGNMLYYVKDRFLRQLDFNSSKDVAVMQLRSG
SKFPVFNMSYNPAENAVLLCTRASNLENSTYDLYTIPKDADSQNPDAPEGKRSSGLTAVW
VARNRFAVLDRMHSILIKNLKNEITKKVQVPNCDEIFYAGTGNLLLRDADSITLFDVQQK
RTLASVKISKVKYVIWSADMSHVALLAKHAIMICNRKLESLCNIHENIRVKSGAWDESGV
FIYTTSNHIKYAVTTGDHGIIRTLDLPIYVTRVKGNNVYCLDRECRPRVLTIDPTEFKFK
LALINRKYDEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEI
ALEAAKALDDKNCWEKLGEVALLQGNHQIVEMCYQRTKNFDRLSFLYLITGNLEKLRKMM
KIAEIRKDMSGHYQNALYLGDVAERVRILKNCGQKSLAYLTAATHGLDEEAENLKETFDP
EKETIPDIDPNAKLLQPPAPVMPLDTNWPLLTVSKGFFEGTIASKGKGGALAADIDIDNV
GTEGWGEDAELQLDEDGFVDAGEGFGEEGLGKGQEEGGGWEVEEDLDLPPELDVPAGPAG
GAEDGFFVPPTKGTSPAQVWCNNSQLPVDHVLAGSFETAMRLLHDQVGVTNFGPYKQLFL
QTYARGRTTYQALPCLPAMYGYPHRNWKEAGLKNALPAVGLKLNDLIQRLQLCYQLTTAG
KFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLIAICREYIVGLSMEIERKKLPKETLEH
QKRICEMAAYFTHSNLQPVHMILVLRTALNLFFKLKNFKTAATFARRLLELGPKPEVAQQ
TRKILSACEKNPTDTYQLNYDMHNPFDICAASYRPIYRGKPVEKCPLSGACYCPEFQGQI
CRVTTVTEIGKDVIGLRISPLQFR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgctaaccaagttcgagaccaaatcggctcgggtgaaagggctcagcttccaccccaag
cggccgtggatcctcaccagcctgcataatggcgtcatccagctgtgggactatcgcatg
tgcacactcatcgacaagttcgacgagcacgatggacctgttcgaggtattgatttccac
aagcagcagcctctgtttgtatctggaggtgatgactataaaataaaggtctggaattac
aaactgcgccgctgtcttttcactctgctcgggcatttggactatatccgcaccaccttc
ttccaccatgaatacccatggatcttgagtgcttctgatgatcagaccattcgggtttgg
aactggcagtccagaacttgtgtctgtgtgctgacaggacacaaccactatgtgatgtgt
gcccaatttcacccctctgaggacctggtagtgtcagccagcttggatcagactgtacgc
gtttgggatatttctggcctgaggaagaagaacctgtcccctggagctgtggagtcggat
gtcaggggaataactggggtggatttatttgggacaacagatgcagttgtgaagcacgtt
cttgagggccatgatcgtggagtgaactgggctgctttccatcccacaatgccactgatc
gtgtcaggagctgatgatcgacaagtgaagatctggaggatgaatgaatcgaaggcctgg
gaggttgacacttgccgggggcattacaacaatgtctcgtgtgctgtctttcacccccgg
caggagctgatcctcagcaattcagaagacaaaagcatccgtgtctgggatatgtcaaaa
cgcacgggtgtccagaccttccgccgtgatcacgatcgcttttgggtgttggctgctcat
cccaatctcaacctctttgctgcaggccatgacggtggcatgattgtgttcaaactggag
cgtgagcgtcctgcttatgccgtgcatgggaatatgctctattatgtgaaggaccgattc
ctccgccagcttgattttaacagctcaaaggatgttgctgtcatgcagctgcgaagtggt
tccaagttccctgtgttcaacatgtcatacaacccagctgagaacgctgtccttctctgc
acaagagcaagcaacttggagaatagcacttatgacctatacaccattcccaaggatgca
gactcccaaaatccagatgcccccgaagggaagcgctcctccgggctaacagctgtgtgg
gtagctcgtaaccgctttgcagtcctggatcgaatgcattcgatcctaatcaaaaacttg
aagaacgagatcacgaagaaggttcaggtgccgaactgtgatgagattttctatgctggc
acggggaacctgttactgagagatgcagactccatcaccctctttgacgtgcagcagaag
cggactctggcctcggtgaagatctccaaggtgaaatatgtcatctggtcagctgacatg
tcccatgtagctctgctggccaagcatgccatcatgatctgcaacagaaagctggaatca
ctctgtaacatccatgaaaacatccgtgtcaagagtggtgcctgggatgaaagtggtgtt
ttcatctataccaccagcaaccacataaaatacgctgtgaccacaggggatcacggcatc
atccgcaccctggacctgcctatctatgttactcgtgtgaaggggaacaatgtgtactgc
ctggacagagaatgtcgccccagggtcctcaccattgatcccacagagttcaaattcaag
ctggcattgatcaacagaaaatacgatgaggtgctgcacatggtgaggaatgcgaagctt
gtgggccagtccatcattgcctacctgcagaaaaaaggttaccctgaggtggccctgcac
tttgtcaaggatgagaagacccgtttcagtctggcactggagtgtggcaatattgagatt
gctctggaagcagccaaggctctggatgacaagaattgctgggagaaactgggagaagtg
gcattgctgcagggaaatcaccagattgtggagatgtgctaccagcgcaccaagaacttc
gataggctctccttcctctatcttattactggcaacctggagaagcttcggaagatgatg
aagatagctgagatccgtaaagatatgagtggccactaccagaatgccttgtatctagga
gatgtggcagagagagtgaggatcctgaagaactgtggacaaaagtccctggcctatctc
acagctgcaactcacggtctggatgaggaagctgaaaacctgaaggaaacgtttgatcct
gaaaaggaaacgattccagacattgatcccaatgcaaaactactgcagcctcctgctcct
gtcatgcctctggataccaactggccattgctgactgtctccaaggggttcttcgaagga
acaattgctagcaaaggcaaaggaggtgctttggctgctgacattgatatcgacaatgtt
ggcactgaaggctggggagaagatgcagaattacagctggatgaagatggctttgtggat
gctggagaaggctttggagaggaaggtctgggtaaaggacaggaagaaggaggtggatgg
gaagtggaagaagacttggatcttcctcctgagctggatgttcctgctggtccagcagga
ggagcagaagatggcttctttgtgccacccaccaagggcaccagcccagctcaggtgtgg
tgtaacaattcacagcttcctgttgaccacgttctggcaggttcctttgagacagcaatg
agactcctccatgaccaggtgggagtaacaaactttggaccctacaagcagctgttcctg
cagacctatgcccgtggacgtacaacctaccaagccctgccatgtctccctgccatgtat
ggctacccacatcgcaactggaaagaagctggcttgaagaatgccctccctgctgttgga
ctgaaactcaatgacctgatccagcgcttgcagctgtgctaccagctcactacagcgggc
aagtttgaggaggctgtggagaagttccgctccatcttgctgagtgtgcccttgctggtg
gtggacaacaagcaggagattgctgaggcccagcagctgatagccatttgtcgggagtat
attgtcggactctcaatggagatcgagcggaagaagctgcccaaagagaccctggagcac
cagaagcgaatctgtgagatggctgcctatttcacccactccaacctgcagcctgtccac
atgatcttggtactgcgcactgctctcaatctcttcttcaaactcaaaaacttcaagaca
gctgctacttttgctcgtcggctgctggagctgggtccgaagcctgaggtggcccagcag
acccggaagatcttgtcagcgtgtgagaagaatcccaccgacacctaccagctcaactat
gacatgcacaacccctttgacatctgtgctgcctcttaccgacccatctatcgtggcaag
cccgtggagaagtgtccactcagtggagcttgctactgccctgagttccaagggcagatc
tgccgtgtcacaacagtgacagagattggcaaagatgtcattgggctgcggatcagcccc
ctccagttccgctga
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integrated database retrieval system
