Numida meleagris (helmeted guineafowl): 110388063
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Entry
110388063 CDS
T06015
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
nmel
Numida meleagris (helmeted guineafowl)
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nmel03000
]
110388063 (SOX13)
Transcription factors [BR:
nmel03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
110388063 (SOX13)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
110388063
NCBI-ProteinID:
XP_021232570
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Position
25:1792168..1825974
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AA seq
612 aa
AA seq
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MSMRSPVSPHLELDGAGSMVNCSIKTEEKKEGGYESPPGAAPSTEPRPSDPPGPPPREGT
DPQALPQESCSPAGDALEPRCSAFEPAVGSQEKLDFNRNLKEVMPTIEKLLSSDWKERLL
GRNAAETKEVKGTQESLAEKELQLLVMINQLSTLRDQLLTAHSEQKNMAAMLFEKQQQQM
ELARQQQEQIAKQQQQLIQQQHKINLLQQQIQQVNMPYVMIPAFTPSHQPLPVTQDPQIA
LPIQPIPCKPVDYPVQLLHSPPPPTLKRPSGSGHLQMQETSQPLNLTAKPKGSDLPSASS
SPSLKMSSCQSLTPSHGAVRDLQSSPSNLPLGFLGEGDAITKAIQDARQLLHGHSGAMEG
ALSHPYRKDHVAMDASPVKERMEEAPSHRLDEALLGCDVDGSRHFPESRNNNHIKRPMNA
FMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQARLSRQHLEKYPD
YKYKPRPKRTCIVEGKRLRVGEYKALMRNRRQDARQGYLIGPQGSQLPPGSSDVLYPRPV
GMQLPSPLMEHYLPRGVDPSMPVIVSARSLKEGDGGGDDGHSVADGEMYRYSEEEDSEGE
EKSDGELVVLTD
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgaggagccccgtttctccccacctggagctcgatggggcgggcagcatggtg
aactgcagcatcaagacggaggagaagaaggagggtggctacgagagccctccgggggct
gcccccagcactgagccccgtcccagcgaccccccaggaccaccgccaagagagggcacg
gacccccaggcattgccacaggagtcctgctcgcccgctggcgatgcgctggagccgcgg
tgctcagccttcgagccggctgttggcagccaggagaagctggacttcaacaggaacttg
aaagaggtgatgccaaccatcgagaaattactgtccagtgactggaaggagcggctgctg
ggccgaaacgctgcggagaccaaagaagtgaaggggactcaggagagcctggcagagaag
gagctccagctgctcgtcatgatcaaccagctgtccacgctgcgggaccagctcctgacg
gcccactcggagcagaagaacatggctgcgatgctctttgagaagcagcagcagcagatg
gagctggcacggcagcagcaggagcagattgcgaagcagcagcagcagctcatccagcag
cagcacaaaatcaacctgctgcagcaacagatccagcaggtcaacatgccctacgtcatg
atccccgccttcacccccagccaccagccccttcccgtgacgcaggacccccagatagcg
ctgcccatccagcccatcccctgcaagccagtggattaccccgtgcagctgctgcacagc
ccccctcctcccacgctaaagagacccagcggctccggccacctccagatgcaggagacc
tcgcagccgctgaacttgacggccaaacccaaaggctccgacctccccagtgcctccagc
tcgcccagtttgaagatgagcagctgccagtccctcacgccgagccacggggccgtgcgg
gacctgcagagcagcccgtccaacctgcccctggggttcttgggcgagggcgatgccatc
accaaagccatccaagacgcgcggcagctgctgcacggccacagtggagccatggaggga
gcgctgagccacccctaccgcaaggaccacgtcgccatggatgcttcccccgtgaaggag
cggatggaggaggctccctcgcaccgcctggacgaggctctgctgggctgtgacgtggac
ggatcgcgccatttccccgagtccaggaacaacaaccacatcaaacggcccatgaacgcc
ttcatggtgtgggccaaggatgagaggaggaagattttgcaggcgttcccggacatgcac
aactccagcatcagcaagatcctgggctcccgctggaagtcgatgacgaaccaggagaag
cagccctactacgaggagcaagcccggctgagccggcagcacctggagaagtatcccgac
tacaagtacaagccccgacccaagcgcacgtgcatcgtggaggggaagcggctgcgcgtg
ggcgagtacaaagcgctgatgcggaacaggaggcaggacgcccggcagggctacttgata
ggtccccagggcagccagctgcccccaggctcctcggatgtgctgtacccgcggccggtg
ggcatgcagctgccgtccccgctgatggagcactacctgccccgcggcgtggaccccagc
atgcccgtcatcgtcagcgcgcgcagcctgaaggaaggcgacggcggcggggacgacggg
cactcggtggcggacggcgagatgtatcgctacagcgaggaggaggactcggagggagag
gagaagagcgacggcgagctggtggtgctgacggactga
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