KEGG   Numida meleagris (helmeted guineafowl): 110388134
Entry
110388134         CDS       T06015                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
nmel  Numida meleagris (helmeted guineafowl)
Brite
KEGG Orthology (KO) [BR:nmel00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:nmel01009]
    110388134 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nmel03036]
    110388134 (KDM5B)
Enzymes [BR:nmel01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     110388134 (KDM5B)
Protein phosphatases and associated proteins [BR:nmel01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     110388134 (KDM5B)
Chromosome and associated proteins [BR:nmel03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    110388134 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel PHD ARID zf-C5HC2 JmjN Exo70_N Herpes_UL42 PHD_5
Other DBs
NCBI-GeneID: 110388134
NCBI-ProteinID: XP_021232696
LinkDB
Position
25:583389..606610
AA seq 1523 aa
MAEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDVDKLH
FTPRIQRLNELEAQTRVKLNFLDQIAKFWELQGCTLKIPHVERKILDLFQLNRLVAEEGG
FDVVCKERKWTKIATRMGFAPGKAVGSHIRAHYERILYPYNLFQSGASLLCLQKPDLASD
TKDKEYKPHDIPQRQSVPPSESCPPARRAKRLRAEATSIKTESDSPEARTHNLRRRMGCA
PPKSENEKETYSAVKLAEKREHAGEQEKDKSKARPKKPTSAVDLYVCLLCGSGNDEDRLL
LCDGCDDSYHTFCLIPPLHDVPKGDWRCPQCLAQECNKPQEAFGFEQAARDYTLRTFGEM
ADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKF
KVRPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWS
YSINYLHWGEPKTWYGAPGYAAEQLEDVMKKLAPELFESQPDLLHQLVTIMNPNTLMAHG
VPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCIEHYRLLSRYC
VFSHDEMICKMASKADVLDVVVASTVQKDMAIMIDDEKMLREKVQKLGVTDSERVAFELF
PDDERQCYKCKTTCFMSAVYCPCKPGLLVCLYHVEDLCSCPTYKYKLGYRYTLEELYPMM
NALKMRAESYNEWASNVNEALEAKISNKRSLISFKALIEESEMKKFPDNDLLRHLRLVTQ
DADKCASVAQQLLNGKRQTRYRSGGGKCQNQLTVNELRLFVRQLYALPCVLSQTPLLKDL
LDRVEAFQQQSQKLLSEEMPSAAELQELLDVSFDFDVDLPQLAELRVRLEQARWLEDVQM
ASSDQNSLTLDDMRRLIDSGVGLAPYPAVEKAMAKLQELLTVSEHWDDKARNLIKARPRQ
SLSSLVAAVKEIEEIPAYLPSGAALKDAVQKAQDWLQEVEALQAGGRVPVLDTLVELVTR
GRSIPVHLDYLPRLESLVAEVQAWKECAASTFLCENSPYSLLEVLCPRCDIGVLGLKRKQ
KKLKEPVPSGKKKSTRLESLGDLERALSESKDTASAMATLGEARLKEMEALRSLRAANEG
KVLCSEEDAELKVCLCQKEPAAPMIQCELCRGFFHTGCVSVPHALQGPRVWLCPHCRRSE
KPPLEKILPLLASLQRIRVRLPEGDALRYMIERTVNWQHRAQQMLYSGNLKLLQDKVGSG
LLYNRWQSAAGQLPETNKVSQTIGAMSFSMPHDWDNRTIYLHSPFSTGQQCIPLHVVSTE
LDELMMEAQLLQVSLPEIQELYQILFTKQSPALQTEQKPSVGPTNDKNECCRGRKDGISY
MERKLKRRFERESFCDEKRARVRKMRTPKKKKLKLSHAKDVCSSKMERERERERLLEAQR
SSESHLHPSDTSYSEQEDSEDEDAICPAVTCLQPEGEEVDWVQCDGSCNQWFHQVCVGIS
PEMAEKEDYLCASCAGKDPQCRK
NT seq 4572 nt   +upstreamnt  +downstreamnt
atggccgagttcctgcccccgcccgagtgccccgtcttcgagcccagctgggaggagttc
gccgaccccttcgccttcatccacaagatccggcccatcgccgagcagaccggcatctgc
aaggtgcggccgccgccggactggcagcctccgtttgcgtgcgatgttgacaagctccac
ttcacgccgcggatccagcggctcaatgagctggaggcccagacccgcgtgaagctgaac
ttcctggaccagatcgcaaagttctgggagctccagggatgtacgctgaaaattccgcac
gtggagaggaagatcttggatttatttcagcttaacagactagttgcagaagaaggagga
ttcgatgttgtttgcaaagagaggaaatggaccaaaatagccactaggatgggatttgct
cctggcaaggccgtgggttcgcacatccgcgcgcattacgagcgcattctctatccctac
aacttattccagtctggagccagcctgctgtgtctgcagaagccggatctcgccagtgac
acgaaggacaaggagtacaagccccacgacatcccgcagaggcagtcggtgccaccctcc
gagagctgccctcctgcacgccgagcaaagcgcctgcgggcggaggcaaccagcattaaa
actgaatccgattctccagaggccaggacacacaacctgagacgcaggatgggctgcgcg
cctccgaagagtgagaacgaaaaggaaacgtacagcgcagtgaaacttgctgagaagaga
gagcacgcgggggagcaggagaaggacaaatccaaggcccggcccaaaaaaccgaccagt
gctgtggatttgtatgtgtgcctcttatgtggcagtggtaacgatgaggaccgcctcctg
ttgtgtgatggctgtgatgacagttaccatactttttgtttaattccaccccttcatgat
gttcccaaaggggactggaggtgcccccagtgtttggctcaggagtgcaataagcctcaa
gaagcatttggttttgagcaagcagcacgagactacacgctccgcacgtttggggaaatg
gcagatgccttcaagtccgactattttaacatgccagtccacatggtccccaccgagctg
gttgagaaagaattctggagactcgttagcaccattgaagaggatgtcaccgtggagtac
ggagctgatatcgcttcgaaagagtttggcagtgggttcccagttagagatgggaaattt
aaagtgagaccagaagaggaggaatacctcgacagtggctggaatttgaacaacatgccc
gtgatggagcagtccgttctcgctcacatcaccgccgatatatgtggaatgaaattaccc
tggctgtacgtgggaatgtgcttttcttcgttctgctggcatattgaagaccactggagc
tattccattaactacctgcactggggagagccaaagacgtggtatggggcccccgggtac
gcagcagaacagctggaggatgtgatgaagaagcttgctccagagctgtttgaatctcag
ccagacctcttgcaccaacttgtcaccatcatgaaccccaatactttgatggcccacgga
gtgcctgtgtatcggaccaatcagtgtgctggagagtttgtgatcacctttccaagagct
tatcacagcggcttcaatcagggttttaattttgctgaagctgtgaacttctgcaccgtg
gattggctgcccttgggtcgccagtgtatcgagcactaccgcctgctgagccgctactgc
gtgttctcccatgatgagatgatctgcaaaatggcctccaaggccgacgtccttgacgtc
gtggtggcatcgactgttcagaaggacatggccattatgattgatgacgagaagatgctg
cgtgagaaggttcagaagctgggagtgacggactcggagcgggtggctttcgagctgttc
cccgatgacgagcggcagtgctacaagtgcaaaaccacttgtttcatgtctgccgtgtac
tgcccctgcaagcccgggttgctggtgtgcctgtatcacgtggaggatctttgttcctgc
cctacctacaagtacaagctggggtaccgctacactctggaggagctctatccaatgatg
aatgcactgaagatgcgcgcggagtcgtacaacgagtgggcttccaacgttaacgaagcc
ttggaagcaaaaatcagcaataaaagaagtctcatcagttttaaggctttgatagaagaa
tcagaaatgaagaagttcccggacaacgacctgctgcggcacctccgcctggtcacgcag
gacgccgacaaatgtgcctcggttgcacagcagcttcttaatggcaaaagacaaaccagg
taccgctccggaggagggaaatgccaaaaccagctgactgtgaacgagctgcggctgttt
gtgaggcagctctacgccctgccctgcgtgctcagccagacaccgctgctgaaggatctt
cttgatcgcgtggaagcttttcaacagcaaagccaaaaactgctgtctgaggaaatgccg
agtgctgcggagctccaggagctcctggatgtcagctttgactttgacgtcgatttgccc
caacttgctgaactgcgggtgcggctggagcaggcccgctggctggaggacgtgcagatg
gcttcctcggatcagaactctctcactctcgacgatatgagacgtctcatagactcaggt
gttggcctggctccctacccggcggtggagaaggcgatggcaaagctgcaggagctgctg
actgtgtccgagcactgggatgacaaagccagaaacctgataaaggccaggccgcggcag
tcgctgagcagcctcgtggcggcagtgaaggagatagaggagatccccgcctacctgccc
agcggcgcggcgctgaaggacgcggtgcagaaggcccaggactggctgcaggaggtggaa
gctttgcaggctggagggcgcgtgcccgtcctggacacgctggtggagctggtgacgagg
ggccggtcgatcccggtgcacctggactacctgccgcggctcgagtccttggtggcggag
gtgcaggcgtggaaggagtgtgcagccagcacgtttctgtgcgagaactccccgtactct
ctcctggaggtgctgtgcccccgctgtgatattggggtgctgggtctgaaaagaaagcag
aagaagctgaaggagccagtgccgagcgggaagaagaagagcaccaggctggagagcctg
ggtgacttagaaagagctctgtctgagagcaaagacactgcctctgcgatggcgacgctc
ggggaagcgcggctcaaggagatggaagcgctgcgctcactccgggcagcgaacgaaggg
aaggtgctgtgcagcgaagaggacgcggagctgaaggtctgcctgtgccagaaggagccg
gctgcccccatgatccagtgtgagctctgcaggggcttcttccacacgggctgcgtttcc
gtgccccacgccttgcagggaccccgcgtgtggctctgtcctcactgccgccgctcggaa
aagccgcctctggaaaaaatcctgccactgctggcctccctgcagcgcatccgcgtgcgg
cttcccgagggggatgccctacggtacatgatagagagaactgtgaactggcagcacaga
gcgcaacaaatgttatattcagggaacctaaaacttctacaagacaaagttggctcagga
ttgctgtacaacaggtggcagagcgctgcgggccagctgccggagacaaacaaggtttct
caaacaatcggagctatgtcattctccatgcctcatgactgggataacagaaccatatat
ttacattctccattttctacaggacagcaatgcatcccacttcatgtcgttagcaccgag
ctggacgagctgatgatggaagcgcagctgctgcaggtttctctgcctgaaattcaggag
ctgtaccagatcctgttcacaaagcagagccccgctctgcagaccgagcagaagccatcg
gtcgggccgaccaacgacaagaacgagtgctgccggggcaggaaggatggaattagttac
atggagagaaaactgaagcgccgtttcgagagagagagcttctgtgatgagaagagagcg
agggtaagaaaaatgagaacgcccaaaaagaagaaactgaaactgagtcacgcgaaggat
gtgtgcagcagcaagatggagagagagagggagcgggagcggctcctggaggcgcagcgc
agcagcgagagccacctgcatccctccgacacgtcctactccgagcaggaggactccgag
gacgaggacgccatctgccccgcagtgacctgtctgcagcccgagggggaggaggtggac
tgggtccagtgcgacggcagctgcaaccagtggttccaccaggtgtgcgtgggcatctcc
cccgaaatggctgagaaggaggactacctctgcgccagctgcgccgggaaggacccgcag
tgccggaaataa

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