Numida meleagris (helmeted guineafowl): 110388912
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Entry
110388912 CDS
T06015
Symbol
COMP
Name
(RefSeq) cartilage oligomeric matrix protein isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel04145
Phagosome
nmel04510
Focal adhesion
nmel04512
ECM-receptor interaction
nmel04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
110388912 (COMP)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
110388912 (COMP)
09144 Cellular community - eukaryotes
04510 Focal adhesion
110388912 (COMP)
09142 Cell motility
04820 Cytoskeleton in muscle cells
110388912 (COMP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nmel04131
]
110388912 (COMP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nmel04147
]
110388912 (COMP)
00536 Glycosaminoglycan binding proteins [BR:
nmel00536
]
110388912 (COMP)
Membrane trafficking [BR:
nmel04131
]
Endocytosis
Phagocytosis
Opsonins
110388912 (COMP)
Exosome [BR:
nmel04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110388912 (COMP)
Exosomal proteins of colorectal cancer cells
110388912 (COMP)
Exosomal proteins of bladder cancer cells
110388912 (COMP)
Glycosaminoglycan binding proteins [BR:
nmel00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
110388912 (COMP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
COMP
EGF_3
cEGF
EGF_MSP1_1
EGF
DUF7630
Motif
Other DBs
NCBI-GeneID:
110388912
NCBI-ProteinID:
XP_021234328
LinkDB
All DBs
Position
27:3804642..3839552
Genome browser
AA seq
761 aa
AA seq
DB search
MNSALAFVFLLCLSCPFSSCQQRRAGVEVGPEMLEEMRQTNRVLMEVRDLLKQQIKEITF
LKNTVMECDACGIHTEATGPVITVTQFNRCVPNPCFPGVACTETSTGFRCGPCPPGYSGN
GSQCTDINECTANPCFPKVQCINTAPGFRCDPCPPGFTGQMVEGVGLAYARANKQVCTDI
NECETGAARNCVPNSICINTRGSYKCGACKPGFVGDQITGCKSQTARLCPNGEVSPCHEK
AQCIVERDGSISCACLVGWAGNGYICGKDTDIDGVPDEKLRCSDKKCRKDNCMTVPNSGQ
EDADRDGIGDACDDDADGDGILNAEDNCVYTRNADQRNVDKDNFGDACDNCRQVKNDDQR
DIDGDGKGDECDDDIDGDGIKNPTDNCKRVPNPDQKDSDGDGVGDMCDSCPTVSNPDQKD
TDHDLVGDVCDTNQDSDGDGHQDTRDNCPSVPNSSQLDTDNDGLGDECDDDDDNDGIPDE
KPPGPDNCRLVPNPGQEDSDGDGVGNLCEDDFDRDMVIDRIDVCPENAEVTLTDFRAFQT
VVLDPEGDAQIDPNWIVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTATDDDY
AGFIFGYQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSKTGPGEYLRNSLWH
TGDTTDQVKLLWKDPRNSGWKDKTSYRWFLQHRPQVGYIRARFYEGPELVADTGVVLDTT
MRGGRLGVFCFSQENIIWSNLRYRCNDTIPEDYETFKVQQD
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagctctagcctttgtttttctcctctgcctctcttgtcctttttcatcatgt
cagcagaggagagcaggagttgaagttgggcctgaaatgctggaagagatgagacaaact
aaccgtgtgttaatggaagttcgagacttgttgaaacagcagattaaggagataacattc
ctgaagaacacagtaatggagtgtgatgcctgtggcatacacactgaagccacaggccct
gtcatcactgtgacgcagtttaacagatgcgtccccaacccctgcttccctggagtggcg
tgcactgagaccagcactggcttccgctgcggaccgtgtcccccaggctattcagggaat
gggtcccagtgcacagatatcaatgagtgcactgcaaacccctgcttcccaaaggtccag
tgcattaacactgctcctggcttccgctgtgatccctgccctcctggcttcaccgggcaa
atggtcgaaggggttggactagcatatgccagggccaacaaacaggtttgcactgacatc
aatgaatgtgagacaggtgctgccagaaattgtgtcccaaattctatctgtatcaataca
cggggatcctacaagtgcggagcttgtaaacctggctttgttggggatcaaatcaccggc
tgcaagagccagacagcgagactctgccctaacggtgaagtcagcccatgccatgagaaa
gctcagtgcatcgtggagcgggatgggtccatctcctgtgcgtgccttgtggggtgggca
gggaacggctacatctgtgggaaggatacagacattgacggagtccctgatgagaagctg
cgctgctctgacaagaagtgccgcaaggataactgcatgactgtccccaactctggccag
gaggatgcagacagggatggcatcggagatgcttgtgatgatgatgctgatggagatgga
atattaaatgctgaggacaactgcgtgtacacacgcaatgcagaccagcgcaatgtggac
aaggataactttggtgatgcttgtgacaactgtcgccaagtgaagaacgatgaccaacgg
gacattgatggtgatgggaaaggagacgagtgtgacgatgacatagatggggatgggatc
aaaaatccaacggacaactgtaaaagagttcctaaccctgatcagaaagatagcgatggt
gatggagtaggagatatgtgcgacagctgcccaacagtcagtaacccagaccagaaagat
actgatcatgatctagtgggagatgtctgtgacaccaaccaggacagtgatggcgatggc
caccaagatacacgagataactgcccatcagtgcctaacagctcccagctggacacagac
aatgatgggctaggagacgaatgtgatgatgatgatgacaacgacgggattccagatgag
aaacctccaggccctgacaactgtcggcttgtccctaaccctggccaagaagattcggac
ggtgatggtgtaggaaatctttgtgaagatgactttgacagagacatggtgattgacaga
attgatgtgtgcccagagaatgcagaagtgacgctaacagacttcagggccttccagaca
gttgtactggaccctgagggtgatgcgcagattgaccccaactggatcgtccttaaccag
ggcatggaaattgtccaaaccatgaacagtgatcctggcttggctgtaggttatacagca
ttcaatggagtggattttgagggcacattccatgtcaacactgccacagatgatgattac
gctggcttcatatttggctaccaggacagttccagcttttatgtggtcatgtggaagcag
atggaacagacatactggcaggcaaaccccttccgagcagtcgcagaacctggtattcaa
ctgaaggcagtgaagtccaaaacaggcccaggtgagtatctccgcaattctctctggcac
actggggacaccacagaccaagtcaagctgctgtggaaggaccctcgcaactctggctgg
aaggacaagacatcttaccgctggttcctgcaacatcggcctcaagttggatacatcaga
gctcgcttctatgaaggccccgaacttgtggcagacactggagttgtccttgatacaact
atgagaggagggcgcctgggagtcttctgcttctcccaagagaacattatttggtcaaac
ctgcgttatcgctgcaatgatactattccagaagactatgaaacatttaaagttcagcaa
gactaa
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