Numida meleagris (helmeted guineafowl): 110388927
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Entry
110388927 CDS
T06015
Symbol
USHBP1
Name
(RefSeq) Usher syndrome type-1C protein-binding protein 1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
nmel
Numida meleagris (helmeted guineafowl)
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nmel03037
]
110388927 (USHBP1)
Cilium and associated proteins [BR:
nmel03037
]
Primary cilia and associated proteins
USH complex and associated proteins
110388927 (USHBP1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
DUF4431
DASH_Dam1
DUF1664
Motif
Other DBs
NCBI-GeneID:
110388927
NCBI-ProteinID:
XP_021234388
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All DBs
Position
27:complement(3402442..3406482)
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AA seq
682 aa
AA seq
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MEEGKAGQSPRSPQRLPGEQLDKDEDRDEEEEEDEDEDVTAAGDKEHITALLADVARLHR
RTERLQRCPSRYRHRQLQEWHRTDPHSTQPLLHREEEEHSGVTSSPCTDGQQPRGLDGAG
TEAHRPDLFADLQHAVSSLERAVISRHRCTAAPPAEWAQSLEELQRVAGARQGPERGEEL
LEAAARNAALQAALGHRDEELSHSTAALQALQGERERLQGKVWELQEALDRLEGTGGAGG
DTTGLSSAPGPGDPQDLPGCLPSCDDARPHSTQPHGPLSPPALASASQELEERMQQLQRH
MERLKEVNQQLSAALHDCKSDSERLSMVLGQHESRSSALRLALHCSERCVDAYAALLERT
WAKLGRDGHGPGAGATGEQSAQHGCGSSPTQGLQLPGQAEPDGQEESGVRSCPGLYSTHG
SEEGALREAIRQLRAEQAAVQVSLRHVPTSTRAPSHGGEDARARAERVLRDARALLPGWR
RPERAELLREVAELKEAMAELRTRLQLAEREKRGLELLAAAQGPREAALRLVLQHMERER
GARSPPSSSSSSEEDAPNPPMGAAAPQRPADPERTAQELCCAVTRIERLHARAQALVLSL
EQSSAVSRAQQEQCVTVTGQFFHAHSALALAYRDARRKQAAQLQHLEAQAGAMQQQQAQR
VQALARRLQALEQRAAGGETCI
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggaggagggcaaggccgggcagagcccccgttccccacagcgccttccaggtgagcag
ctggacaaggacgaggacagggacgaggaggaggaggaggatgaagatgaggacgtgact
gcggcaggggacaaggagcacatcaccgcactgctggcagatgtggcccggctgcaccga
cgcactgagcggctgcagcgctgccccagcaggtaccggcaccggcagctgcaggagtgg
caccgcacggacccccacagcactcagcctctgctccacagggaggaggaggagcactcg
ggggtcaccagcagcccctgcacggatgggcagcagcctcgggggctcgatggcgccggc
acggaagcccaccgccccgacctctttgccgacctgcagcacgccgtcagctcgctggaa
cgcgccgtcatctcccggcatcggtgcacggcggcaccgccggcagagtgggcgcagagc
ctggaggagctgcagcgcgtggcgggggcacgccagggcccggagcggggtgaggagctg
ctggaggcggcggcgaggaacgcggcgctgcaggcggcactggggcaccgcgacgaggag
ctgagccacagcacggccgcactgcaggcgttgcagggggagcgcgagcggctgcagggg
aaggtgtgggagctgcaggaggctctggacaggctggaggggacgggtggcgccgggggt
gacaccacggggctcagcagcgccccagggccaggggacccccaggacctgcctggctgc
ctcccgagctgcgatgatgctcggccccacagcacccagccccatggccccctctccccc
ccggccttggcgagtgccagccaggagctggaggagaggatgcaacagctgcagaggcac
atggagaggctgaaggaggtgaaccagcagctgtcggccgccctgcacgactgcaagagc
gattcggagcggctcagcatggtgctggggcagcacgagtcccgcagcagcgcgctgcgc
ctggcactgcactgcagtgagcgctgcgtggatgcctacgctgcgctgctggaacggacg
tgggcaaaactgggcagggacgggcacggccccggtgctggagctacaggggaacagagc
gcacagcacggctgtgggtccagccccacacaggggctgcagctcccgggccaagcagag
ccagacgggcaggaggagagcggggtcaggtcctgccccgggctgtacagcacccacggg
tcggaggagggggccctgcgcgaggccatccgccagctgcgtgcggagcaggcggccgtg
caggtgtccctgcgccacgtccccacgtccacccgtgccccgtcccacggtggcgaggat
gcccgcgcccgtgctgagcgcgttctgcgggatgctcgtgccctcctacccggctggagg
cggccggagagagcggagctgctgcgggaggtggcggagctgaaggaggccatggccgag
ctgaggacgcggctgcagctggcggagagggagaagcggggcctggagctgttggcggct
gcgcagggcccgcgggaggcagcgctgcgcctggtgctgcagcacatggagcgcgagcgg
ggggctcgcagcccccccagcagctccagcagcagcgaggaggatgccccaaaccccccg
atgggagcagcagcaccgcagcgccctgcggacccggagaggacggcgcaggagctgtgc
tgcgcggtgacacgcatcgagcggctgcacgcccgagcacaggccctggtgctgtccctg
gagcagagcagcgccgtcagccgcgcacagcaggagcagtgcgtcaccgtcaccgggcag
ttcttccacgctcacagcgctctggccctggcgtaccgcgatgcccggcgcaagcaggcg
gcacagctgcagcacctggaggcgcaggcgggggccatgcagcagcagcaggcgcagcgc
gtgcaggcactggcacgacggctgcaggccctggagcagcgcgcggccggcggcgagacc
tgcatttag
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