KEGG   Numida meleagris (helmeted guineafowl): 110389067
Entry
110389067         CDS       T06015                                 
Symbol
KDM4B
Name
(RefSeq) lysine-specific demethylase 4B isoform X1
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
nmel  Numida meleagris (helmeted guineafowl)
Brite
KEGG Orthology (KO) [BR:nmel00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nmel03036]
    110389067 (KDM4B)
Enzymes [BR:nmel01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     110389067 (KDM4B)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     110389067 (KDM4B)
Chromosome and associated proteins [BR:nmel03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    110389067 (KDM4B)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD SLX1_C DUF7141 Rad9_Rad53_bind
Other DBs
NCBI-GeneID: 110389067
NCBI-ProteinID: XP_021234659
LinkDB
Position
27:complement(4835811..4921865)
AA seq 1106 aa
MGSENPSPQNPGCKIMTFRPTLEEFRDFGKYIAYIESQGAHRAGLAKVIPPKEWKPRKTY
DDIDDMVIPAPIQQVVTGQSGLFTQYNIQKKPMTVGEYRRLANSEKYCTPRHQDFEDLER
KYWKNLTFVSPIYGADISGSLYDTDVEEWNIGNLNTLLDMVEHECGIIIEGVNTPYLYFG
MWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAKGFFPGSSQGCDAFLR
HKMTLISPSILKKYGIPFDRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY
GKMATQCTCRKDMVKISMDVFVRVLQPERYDLWKQGKDIAVLDHMKPTALTSPELDAWNE
TKADLKAKLLRRIGDEEEDNKHRSHRKRSQPRRHKTEDQKSLGDVMAIETALEDVKVKEE
LKRGPDVEEEERSKVIEGEGDSKVKARPPKVKGERKKKHLFHQHQHHLQTSQPLQQQPPL
PPAAQQQQTEEEAAAARPPVPTAAPAASAADKSLLTTPLNVVQPSEAPVEEDDFKPRPII
PMLYVVPRTKKVVFDKEHMSCQQAFEQFATQKSPGWREQTVPLEIPVKEEESAEAENTEI
ATETAAFSKMKMEIKKSRRHPLGKPPTRSPLSVVKQETSSDEETFPFSGEEDMSDLEALK
SLLSLQWKNKAPNFQAERKFNAAAALSEPYCAVCTLFYPYNQSLQMDKEAVPVSVGETTS
FMHPSKCGQKTKPLIPEMCFTSSGENTEPLPSNSYIGEDGTSSLISCAKCCLQVHASCYG
IRPDLVNESWSCSRCSANAWAAECCLCNLRGGALQMTTDGRWVHIICAIAVPEARFLNVM
ERHPVDITAIPEQRWKLKCVYCRKRMKKVSGACIQCSYEHCSTSFHVTCAHAAGVPMEPD
DWPYVVSITCFKHKAANQNIQFRREVTLGQTVITKNRNGLYYRCKVIGMTTQTFYEVNFD
DGSYSDNVYPESIISRDCIQLGPPPEGEMVQLQWTDGIIYKAKFVAAQISQIYQVEFEDG
SQLMVKRGDIYTLEEELPKRVKSRLSLSTGAPQEDVFSGDEVRAAKRPRLGNARNPEEYG
QNPDYLAFMESLLQTQYQPGTQSNMF
NT seq 3321 nt   +upstreamnt  +downstreamnt
atggggtctgaaaacccaagtccacagaaccctggctgtaagattatgacctttcgtccc
actcttgaggagtttcgggacttcgggaaatacattgcttacattgaatcacaaggagct
caccgagcaggtcttgccaaagttattcctcccaaggagtggaagccccgaaaaacctac
gatgacatagatgatatggttatcccagctcccattcagcaggtggttactggccagtca
ggattattcacccagtacaatatacagaagaaacccatgactgtgggagagtaccggcgt
ctggctaatagtgagaaatattgtactccacgccatcaagattttgaagacttggagcgc
aagtactggaagaatctcacttttgtctcgccaatttatggggctgatatcagtggctct
ctatatgacacagatgtggaagagtggaatattggcaatctgaacaccctgttagacatg
gtggaacatgagtgtggtattattatagaaggtgtaaacactccctacctctactttggg
atgtggaagacaacgtttgcttggcatactgaggacatggatctctacagtatcaactac
ttgcattttggggagccaaaatcctggtatgccatacctccagaacatggcaagagattg
gaacgcttggcgaaaggattttttcctggaagctctcagggatgtgatgctttcctccgt
cacaagatgaccctcatttcaccttcaatcttgaagaagtacggcattccttttgaccgg
atcacccaggaagctggagagtttatgattacatttccttatggttaccatgcaggcttc
aatcatggtttcaactgtgctgagtcaaccaactttgccactttgcgatggattgactat
ggaaaaatggcaacccaatgtacgtgccgcaaagacatggtgaagatttccatggatgtc
tttgtgagggttctgcagccagaacgttacgatttatggaaacaaggaaaagacattgct
gtcctggaccatatgaaacccacagctctgactagcccagaactagatgcctggaatgag
acgaaggcagacttgaaggccaaattgcttcgcaggataggagatgaggaagaggacaac
aaacaccggtctcacagaaaaagaagtcaacccagaagacataaaacagaggatcagaag
tctctgggagatgtcatggctattgaaactgccttagaagatgtgaaagtgaaagaggaa
ctgaaaagagggccagatgtagaggaagaagaaagaagcaaagtgattgagggagaaggt
gacagcaaagtaaaggctcgtcctccaaaagtaaaaggtgagaggaagaagaagcatctt
ttccatcagcaccagcaccacctgcaaacatctcagcctctgcagcaacagccaccactg
ccaccggcagcgcagcagcagcagacagaggaggaggcagcagcagcacggccaccagta
cccacagcagcacccgcagcatccgcagcagacaagagcttgctgaccactcccctgaac
gttgtccagccctcggaggcaccagttgaggaagatgactttaagcctcggcctatcatt
cccatgctttatgtggttccacggaccaaaaaggtggtgtttgacaaagagcacatgtcc
tgccagcaggcatttgagcagtttgcgactcaaaagagtcctggttggcgggagcagaca
gtccctttggaaatccctgtgaaagaagaggagagtgcagaagcagaaaatacagagatt
gctacagagactgctgctttttcaaaaatgaagatggagataaagaaaagtcgtcgtcac
ccccttggcaaaccgccaacccgctccccattgtcagtagttaaacaggagacctcgagt
gatgaggaaacatttccattttctggggaggaagatatgagtgacctagaggctttgaaa
tctttactttctctccagtggaagaataaagcacctaatttccaagctgaaagaaaattc
aatgcagctgctgccctgagtgagccatactgtgctgtctgtaccctcttttacccatat
aaccagtccttacagatggataaagaagctgtcccagtctctgtaggggagaccacctct
ttcatgcacccttctaagtgtggacaaaagacgaagcctctgatcccagagatgtgcttt
acctcaagtggagaaaacacagagccccttccttcaaattcatatattggagaagatgga
accagttccttgatatcctgtgccaaatgctgtctgcaggttcatgctagctgttatgga
atacgtccggatttggtgaatgaaagctggtcttgctcacgatgctcagccaatgcatgg
gcagcggaatgttgcctgtgtaatctcaggggaggagcacttcagatgaccactgatggg
cggtgggtccatataatttgtgctattgctgtccctgaggcccgttttctcaatgtgatg
gagcgtcatcctgtggatatcactgctattccagagcaaaggtggaaactgaaatgtgtg
tactgtcgaaagcggatgaagaaagtgtctggtgcctgcatccagtgctcctatgagcac
tgctccacttccttccacgtgacctgcgcacacgctgctggcgtgcccatggagcccgat
gattggccctacgtcgtgtccatcacttgcttcaaacacaaagcagccaaccagaatatt
cagtttcgaagggaagtgacccttggacagactgtgatcacaaagaaccggaatggactc
tactacagatgtaaagtgattggcatgacaacacagactttctatgaagtaaactttgat
gatggttcatacagtgacaacgtttacccagaaagcattattagcagagactgcatccaa
ctgggaccccctccagagggtgagatggttcagctgcagtggacagatggaatcatctat
aaggccaagtttgttgcagcccagatcagtcagatttatcaggttgagtttgaagatggt
tcccagctaatggtaaagcgtggtgacatttatacgttggaggaagagcttccaaagaga
gtgaagtctcgcttgtccctcagcactggggcccctcaggaagatgtattttcgggagat
gaagtgagagcagccaagcgtccccggctggggaatgcaaggaatcctgaagagtatgga
caaaacccagattacttggcctttatggagagcctgttgcagacacagtaccaacctgga
actcagagcaacatgttttaa

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