Numida meleagris (helmeted guineafowl): 110389497
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Entry
110389497 CDS
T06015
Symbol
VPS13A
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
nmel
Numida meleagris (helmeted guineafowl)
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nmel04131
]
110389497 (VPS13A)
Membrane trafficking [BR:
nmel04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
110389497 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
110389497
NCBI-ProteinID:
XP_021235690
LinkDB
All DBs
Position
Z:38042643..38137214
Genome browser
AA seq
3194 aa
AA seq
DB search
MVFESLVVDVLNRFLGDYVVNLDSSQLKLGIWGGAVALKNLEIKENALSQLDVPFKVKAG
HIGQLNLQIPWQNLYTQPVEAVLDGVYLLIVPTASIKYDAEKEARQLSEARQRELQRIEE
AKQKIADQDKVKEEKQDTFVEKLVTQVIKNLQVKISNIHVRYEDDITNRSNPLSFGISLQ
NLSLQTSDKNWNPCLHDESARLFYKLVRLDNLFAYWNVKSEMFYRYGYNESLVSLKQGVA
CHNVIPVGYDFVFRPISAEAKLLMNPRSDIDFSTPKMDLDINIKDIAVEFNKPQYFSVME
LLESIDMMTRNLPYRKYRPDVPLHNNAKIWWKYVIYGILEVNVQRKLQMWSWEHIRHHRK
QVKNYKDLYRTKIISKKPNEEILKSLEEFEKVLDIFNITLARQQAEVEATKSGCKIYKPG
TKQDDENSGGWFSWIWGWSREDKDEQKQEVKTSTGLEVLMTSEEKAKLYAAIGYSETAVD
PTLPKSYEAMKLSINLKSMSISIRENNQTPELVQFSLNELSTVFTQRPGAQAIRFETKIT
SLEVTGMSQENCTPCLLSSRTVYSDDSTSLLSIVFETNPLDEEADQRLKIESQPLEIIYD
AKTINSLVDFFRPPKDVHLEQLTSATLMKLEEFREKTSTGLLYVIETQKVLDLKINLMAS
YIIVPQNGFYDSTSNLLLLDLGSLKMKSKSRSDISGLKVGQSTIEDIMSRAYDSFDIQLT
SIQLLYSKHDENWQEARKLKYSSQHILQPLDVKVEFGRAMVVTDARMPKFKLSGQLPLLS
VQISDQKLKSILELVDSIPKTESTPATTSPPKITEAAISPVLSAPHLSQLPVLDLHSFAE
SESEEEFYDALSSPVEDVPFFEAPSGSLKRASSTRRKKLNKQESLKNMTELQLRFEVAEV
LIKLCRLTDNTETPVLQLEVVGLGTELKLRTFDMTASAFLHEICLLCPEYMDDNDKPVYL
VTTLDNVEDDLLTLEYIKADINGPELKTAYQNVLQKIKVNFSSLDVHLHTETLLNAVNYL
NNLLPKQEAKVAEEPVHEKTEDKKDVLKKLTSKKSKYEDVIDLNIWADLSCLRVFIREKK
HRIAEIHIEGLDSQVIMKKTATEITAKLKNIVIVDSDEMALYNKALYITGKEVFNFKMIS
YVNATDGIAYTNMDVVDNRVYLTVGCIQVVFVNKFFSSILAFINNFQAAKEALTEATVQA
AEKAATGVKELAERSSRLALDINIKAPVVIVPQSAVSANVLVADLGLITVKNRFFIAKTK
TRYNLPPVVDSMTVKLSELKLYRSCYEQNSLQTEVQLLQPLNLEVAVERNLAAAWYNEVP
DIEISGRLKPMNLILSQEDITTILRTLNENIGESSGASPPLQELKDATSHCSDIHSTSEH
SAGVTVVTSAVVELHSPVKIKTTLKLDFRFDSLTLVLYNSNSKQGTDLDQRDDLLKLAEF
KLVLMSAAVKMLSDGSMNASVKLANCTLDDKRQAIDKATPRMVEMKHGFEKKVMMDINYK
QGRDGTVLEMVVQEIYLCASMEFLLTVADIFLKANAESAAAQRNLRQSLPLKEQTPLQPV
STMEMNVIVKNPEIVFVADLTRSDAPALVVTTQCEVFIKNSPERYSMTAAVKEIQVKACP
FLPEKRKGNVTTVLQPCDFFFEMKQSGNNPQSADLMIKSLTVKVSPIIINTVITITSALY
RTAETAEEEINQVPPGLWNTKDLKDLKLWFLEESNESKDTNPATELVPTGQLLKMSIESV
VLTLEAGVGHRTVPMLLAKSSFLGEVKNWSTLINLRSHLELEVHYFNEMFGVWEPLLEPL
EIEKTDLFKPWILEIKMKKKAKKALVESDAEEETYKVPEYKTVISVSSKDQLNITLSKCG
LQMLSNLGTAFAEAASQTSDIFKKDRAPFVLINSLGLAITVLPSDSFRVLNAEFGAKIFN
LRDGDTLNMEYVRTKSESEQFTAMTTLSSKRFYIQVCPHNHSAVEKIPLTKVGRCIYRVR
HEESGVERSIVCQIDTVEGNKMITIRSPIQIRNHFSIPFNIFDEGRCLGTASPENEFNIP
LSSYRSILSLLPIANENGVDGEYDMCEGITFDEIMKNVDSLLQRKCQSVRSTNHSLIINI
VTVKDTLTSSLCSDDQWDYPYVVHLWPSVLLHNLLPYHITYSIEGNGNKYVTLQDGCSAQ
IHNAVLDQTKLDLQLLNYLDQNWKSEYHIKSNLPDISFTTFYCITELDKTELDIAVHVTY
TTGQMVIAIHSPYWMVNKTGRMLQYKADGIHRKHPPDCKKPLLFSFQPKNFLQNNKVQLM
VTDSELSDQFSLDTVGSHGSVKCKSHKKDYQVGVTINNSSFNITRIVTFTPFFMISNRSK
YTLEVAEEGKEKWIPLVLQQCIPFWPENDANKLLVRVENSDLPPKKIDFDKQENCLLLHL
DNKLGGITVDVNLSEHSTVITFSDYHDGAAPFLLINHTEEEIIEYGQSSLSELEGCLQPN
KAVLYTWADPAGSRKLRWKCGKRTEEITPKEDKIEVLNLDCRKVVYLVSFFEGLQRIVLI
TEDKNVFKLAYESVQAELAEQEIILSLQDVGISLVNNYTRQEVSYIGITSSDVVWETKPK
KKSRWKPMSVKQTDKLEQEFKEYSELTPSENKTVELEPNILVCLTPSGNDMKIQQPNEIP
IRRNYLPALKVEYSSSAHQKSFRIQIYRIQIQNQIPGAIFPFVFYPIKPPKSITLDSAPK
PFTDVSIVMRTAGHSQISHIKYFKVLIQEMDLRLDLGFLNALVEFFTQTDVPTVQQLELF
KKDVESLQEELMSVSSMDTSQISLYEYFHISPIKLHLSFSLSTGGEDSNKEERKKELIPL
QSLNLLLKSIGATLTDVQDVVFKLAFFELSYHFCTTQQLQSAVIKHYSKQAIKQMYVLIL
GLDVLGNPFGFIRGLSEGVEAFFYEPYQGAIQGPEEFIEGMALGLKALVGGAVGGLAGAA
SRITGAMAKGVAAITMDEDYQQKRREAMNKQPTGLREGITRGGKGLVSGFVSGITGIVTK
PIRGAQKEGAAGFFKGVGKGLVGAVARPTGGIIDMASSTFQGIKKVADSSEDVVSLRPPR
FFGEDGVIRPYRLRDGTGSQMLQKIENGRFAKLRYIAHAMVNSTDLLMVTKSGVLFVTKG
TFGQLTCEWQYTYDEFTKEPFIVDGRRLRIEAKERVKSVFHAKEFGKIINFKSPEDAKWI
LSKLEEVRENRPKS
NT seq
9585 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttgaatcgctggtggtggacgtcctgaaccgtttcctcggtgactacgtagtg
aacctagacagctcccagctgaagctgggcatctggggaggagccgttgcactgaagaat
cttgaaataaaagaaaatgcactgagtcagctggatgtgccatttaaggttaaagcagga
catattggtcagcttaacctacaaattccatggcaaaacctttatactcaacctgttgag
gcagttcttgatggagtttatttgcttattgtgcccacagccagcataaaatatgatgct
gaaaaagaggccaggcagctttcggaagcaaggcagagggaactgcaaaggatagaggaa
gcaaagcagaaaatagctgaccaagataaagtaaaagaagaaaaacaagacactttcgta
gaaaaactagtcactcaggttatcaaaaatcttcaagtgaaaatttccaacatccatgtt
cgctatgaagatgatatcacgaatcggagtaaccccttgtcatttggtatttcacttcag
aacctaagtttgcagacctcagataagaattggaatccatgtttacatgatgaatctgcc
aggttgttctataagcttgtacgactggataacctttttgcttactggaatgtgaaatct
gagatgttctatcgttatggctataatgaatcattggttagcttgaaacagggagttgcc
tgtcacaatgtgattccagttggttatgattttgtattccgcccaatttctgctgaggcc
aaacttcttatgaatcctcgatctgacattgatttctcaactccaaaaatggatttagat
ataaatataaaggacatagctgttgaattcaataagccacagtacttcagtgttatggag
cttcttgaatctattgatatgatgactcgaaatttgccgtataggaagtacagacctgat
gttccattgcacaacaatgccaagatatggtggaaatatgttatttatggcatccttgaa
gtaaatgttcaacgtaagctccaaatgtggtcatgggaacatattcggcatcataggaag
caagtgaagaactataaggatttgtatagaacaaagataatatcaaaaaaacctaatgaa
gaaatcttaaaatcattggaggaatttgaaaaggtcctggatatttttaacatcacgctt
gcaaggcagcaagcagaagttgaggcaactaaatctggatgcaaaatatacaagccagga
acaaaacaagatgatgaaaattctggtggctggtttagttggatatggggctggtcacgt
gaagataaggatgaacagaaacaagaagtaaagacttcaacaggtcttgaagttcttatg
acaagtgaagagaaagctaaactttatgcagcaattggatatagtgaaacagctgtggac
ccaacacttcccaaatcatatgaagccatgaagttgtctataaatttaaaaagcatgtca
atatcaataagagaaaacaaccaaactcctgagttggtacaattttctttaaatgaattg
agtacagtatttacgcaacgacccggtgcacaagcaataagatttgaaaccaaaataact
tcacttgaagttacaggcatgtcccaagaaaactgtacaccctgtcttctgtcttctcga
acagtttattcagatgatagtacctcactcttaagcatagtctttgagactaacccattg
gatgaggaggcagatcagaggcttaaaatagaatcacagccactggaaatcatatatgat
gcaaaaacaataaacagcttagtggatttcttcaggcccccaaaagatgtacatttagag
caattgacatctgcaactctgatgaagcttgaagagtttcgtgaaaaaacatcaacgggc
ttgttgtatgttattgagacccagaaagttcttgacctcaaaattaacctcatggcttca
tacatcattgttccacaaaatggattctatgactccacttctaatctacttcttttggat
cttggtagtcttaagatgaaaagcaaaagtcgttctgatatatcaggtcttaaggttgga
caaagcactattgaagatataatgtcaagagcttatgacagttttgatatccagctcacc
agtatacaactactttacagcaaacatgatgagaactggcaagaggctcgtaagctgaaa
tactcatctcaacacatcttgcagcctttggatgtaaaagtggaatttggtagggctatg
gttgtcactgatgcaagaatgcccaagttcaagctgtctggacagctgcctttactttct
gtccaaatatcagaccaaaagctgaaaagtatcttggagctagttgacagcattcctaaa
acagaaagtactcctgctaccacctctcctccaaaaataactgaggctgcaatatcccct
gtgctctccgcaccacatttatcacagcttcctgttttggatcttcattcatttgcagag
tcagaatcagaagaagaattttatgatgctctaagcagccctgtggaagatgtgccgttt
tttgaagccccatctggttccctcaaacgagctagcagcacaagacgaaaaaaactaaat
aaacaagaatctttgaaaaatatgacagaactccagttgaggtttgaagtagctgaggtc
ttaataaaattatgccgtcttactgacaatactgagacaccagtgctgcagcttgaagtt
gtagggttaggcactgaacttaaattaagaacatttgacatgactgcaagtgctttcctg
catgaaatttgtctactgtgtccagagtatatggacgataatgacaaaccagtttactta
gttactactttggataacgtagaagatgatcttctcactctggagtacataaaggctgat
attaatggaccagaattgaagactgcctatcagaatgttctacagaaaataaaggtaaac
ttttcatctcttgatgttcatttgcataccgagactctcttgaatgctgtgaactatctg
aacaatcttctacccaaacaagaagctaaagttgcagaagagccggtccatgaaaaaaca
gaggataaaaaggatgttcttaaaaaattaacatcaaaaaaatcaaagtatgaagatgtt
attgacctaaatatctgggcggatttatcctgtttacgtgtctttattagagagaaaaaa
cacagaatagctgaaattcacattgaaggtctggatagccaagtgatcatgaaaaaaaca
gcaacagaaataactgcaaaactaaagaacattgttattgtggattctgatgagatggca
ttgtataacaaggctctttacatcacaggaaaagaagtcttcaacttcaaaatgatatct
tacgtgaatgctacagatggtattgcatacacaaatatggatgttgttgacaatcgtgtt
tacctaactgttggttgtattcaagtagtttttgtcaacaaattcttttcttctattttg
gcttttataaataactttcaagctgccaaggaagctcttactgaggcaacagttcaagca
gcagagaaagcagctacaggtgtgaaagagctagcagagcgtagttctcgtttggcacta
gatatcaatattaaagcacctgttgtgatagttcctcagtcagcagtttccgcaaatgtc
ctggtggctgatcttggtctaatcactgtaaagaaccgattctttattgctaaaacaaag
actcgatataatctcccacctgttgttgactctatgacggtgaaattgagtgaactgaag
ttatacaggtcatgctatgagcaaaattctttgcaaactgaagtacagctgctgcaacca
ctcaatctggaagtagctgttgaacgaaatttagctgctgcatggtataatgaagtacct
gatattgaaatatctggacgactcaagcctatgaatctaattctcagtcaggaggacatt
acaacaatactgaggacactaaatgaaaatataggtgaaagctcgggcgcgtcaccacct
ttacaagaactgaaagatgcaactagtcattgtagtgatatccacagtacttcagagcac
tctgcaggtgtaactgttgtgacatcggctgtggtggaattgcattcacctgtgaaaata
aaaacaacactaaaactggatttcagattcgactctttgactttagtgttgtataattca
aattcaaaacagggtacagatttggatcagagagatgatcttttgaagcttgcagagttt
aagttagtgttgatgtcagctgctgtgaaaatgttatcagatggctcaatgaatgcttca
gtcaagttagcaaactgtacgttagatgataaaagacaggcaatcgacaaggctacacca
aggatggtggaaatgaagcatggatttgaaaagaaagttatgatggatataaactataaa
caggggagagatggcactgttcttgaaatggttgttcaagagatatatctttgtgcaagc
atggaatttctacttacagttgcagatatattcctaaaagctaatgcagaaagtgctgct
gcacagaggaatctcaggcagtccttacctttaaaggagcaaacacctctgcagcctgta
tctacaatggaaatgaacgttattgttaaaaatccagaaattgtgtttgtggctgattta
acaagaagtgatgctcctgctttggtggttacaacacagtgtgaggtcttcattaaaaat
agccctgaaaggtatagcatgacagctgctgttaaagagatacaagtgaaagcatgccca
tttcttccagaaaaaaggaaagggaatgtaactacggtattacagccttgcgacttcttc
tttgaaatgaaacagtctggtaataatcctcagtcagctgatctaatgattaaatctcta
acagtaaaagtttcgccaataatcataaatacagtaatcactattacgtccgccctttat
cgaactgcagaaacagcagaagaagaaattaatcaagttcctccaggcttatggaatacg
aaagacttaaaagatctaaaattgtggtttcttgaagaatcaaatgaaagcaaagacaca
aatccagccaccgaactggttcccacaggacagttattgaaaatgagtatagaatctgtt
gttcttacacttgaagctggggttgggcaccgtactgtaccaatgctcttagccaagtcc
tcatttcttggagaagtcaaaaactggagtacactcatcaacctacgttctcaccttgag
ctagaggtacactattttaatgagatgtttggagtgtgggaacctttacttgagccacta
gaaattgagaagaccgacttatttaaaccatggattcttgaaatcaagatgaagaagaaa
gctaaaaaagcattagttgaatcagatgcagaagaagaaacctataaagttccagaatat
aaaacagtaataagtgtttcctcaaaagatcagctgaatattacattatccaaatgtgga
ctacaaatgttgagtaacttgggaacggcatttgctgaagcagctagtcaaacttcagat
atcttcaaaaaagaccgagcgccgtttgtactaataaattctttaggacttgccatcact
gtcttgcctagtgattctttcagagtcctcaatgctgaatttggagcaaaaatattcaat
ttaagagatggagatactttaaatatggaatatgtcagaactaaaagtgagagtgaacag
ttcacagcaatgacaaccctgagtagcaaaaggttttatattcaagtctgtccacataat
cattctgctgttgagaagattccgttgaccaaagtgggtcgatgtatttacagagtaagg
cacgaggagtcaggtgttgaaaggtccattgtctgccaaattgatactgttgaaggaaac
aagatgataactattcgttctcctatccagataaggaatcatttttcaatcccattcaat
atttttgacgagggaagatgtctagggactgcatcaccagaaaatgaattcaacatacca
ttgtcctcatacagatcaatactgagtttgctacccatagcaaatgaaaatggagtggat
ggagaatatgatatgtgtgaaggaattacttttgatgaaattatgaaaaatgttgacagc
ttattgcaaaggaaatgccagtctgtgaggtcgactaaccactcacttatcatcaatatt
gttactgtaaaagacacattgacatcttcattatgttcagatgatcagtgggattatcca
tatgtcgttcatttatggccttctgttcttctccacaatcttcttccttatcacataact
tactccatagagggaaatgggaacaaatatgtcactctgcaagatggatgttcagcccag
attcataatgcagtcttggatcaaacgaaactagatttacagttgcttaactatcttgat
caaaactggaaaagcgagtaccatataaaaagtaacttaccggatatcagcttcacaaca
ttttactgcatcacagagttggataagactgaactggacattgctgtccacgtgacatac
acaactgggcagatggttatagcaattcacagcccatactggatggtaaacaaaactggt
cgaatgttgcaatacaaagctgatggtattcaccgcaagcatcctccagattgcaaaaag
ccgctactgttttctttccagcccaaaaacttcctccaaaataacaaggttcaacttatg
gtaactgacagtgagctgtctgatcagttttcactggacactgttggaagtcatggttcg
gtgaaatgcaagagtcataaaaaagattatcaagtcggtgtcaccataaacaacagcagt
tttaatattactagaattgtaacttttactccattttttatgatctcaaatagaagcaaa
tacactttggaagtggctgaagaaggcaaggaaaagtggataccacttgttttgcaacag
tgtattcccttttggcctgaaaatgatgccaacaaactgcttgttagagttgaaaattct
gatctccctccaaagaagatagattttgataagcaagaaaactgtctcttactgcattta
gacaacaagcttggagggattacagtggatgtcaacttgtctgaacattctacagtgatt
actttttctgattaccacgatggtgcagcaccctttctgttaataaaccatactgaagaa
gaaattattgagtatggacaaagttccctcagtgaattagaaggctgtcttcagccaaac
aaggcagtgttgtatacttgggcagacccagcaggatctagaaaattgagatggaaatgt
ggaaaaagaactgaggaaattacaccaaaagaggacaaaatagaagtactcaacctggac
tgtagaaaggtggtctatttagtgtcattttttgaaggtttgcagcgcattgtcctaatc
actgaagataagaatgtatttaaattggcatatgaaagtgtacaggcagaactagcagag
caagaaattattctgtctttacaagatgttggaatttcattggttaataattatacaaga
caggaggtgtcctacataggaattacaagttctgatgtggtctgggagacgaaacccaag
aagaagtctagatggaaaccaatgagtgttaagcaaacagataagttagaacaagaattc
aaagaatacagtgagctaactccatcggaaaataagactgttgagttggaaccaaacatt
ttggtgtgtttaactcctagtggaaatgacatgaagattcaacaacccaatgagattcct
atcagaaggaattacctgccagctttgaaagttgagtacagttcatcggcacatcagaaa
tctttcagaattcaaatttacaggatacaaatacaaaaccagattcctggagccatattt
ccctttgtgttctatcctattaaacctccaaagtccatcaccttggattcagcaccaaaa
ccatttactgatgtcagtattgttatgagaactgcaggacattcacaaatatctcatatt
aagtactttaaggtcctgattcaagagatggatctcagattagaccttggcttcctgaat
gcactggttgaattttttacacagactgatgtacctactgtccaacagctggaacttttc
aaaaaggatgtagaatctcttcaggaagaactgatgagtgtgtcatccatggatacatca
caaatcagcttgtatgaatactttcatatctctccaattaagttacatttaagcttttca
ctcagtactggtggtgaagatagtaacaaagaagaaagaaagaaagaactgataccactt
cagtctttgaatctccttctgaagagcataggtgccaccctcacagatgtacaagatgtc
gtctttaagttggcgttctttgaactcagctatcacttctgtactacacaacagctccaa
tcagcagtgataaagcattattcaaaacaggctattaaacagatgtatgtccttattctt
ggccttgatgtattgggcaatccatttggattcataagaggcttgtctgaaggagtagaa
gcatttttctatgagccttatcagggagccatccagggtcctgaagaatttatagaagga
atggcactaggacttaaagcactagtagggggagctgttggtggattagctggtgctgct
tcaagaatcactggtgctatggcaaaaggtgtagctgcaataacaatggatgaagattat
cagcaaaaaaggagagaagccatgaataaacagcccactggtctgagagagggtatcact
cgtggaggaaaaggattagtttctggtttcgtcagcggcataacaggaatagttacaaaa
ccaataagaggagctcagaaagaaggagcagctggttttttcaaaggtgttggaaaaggc
ctagtgggagcagtagctaggcctactggaggaatcatagacatggcaagcagcacattt
cagggtattaaaaaagttgccgactcatcagaagatgtggtaagcctacgcccacctcgc
ttctttggtgaagatggtgttattagaccttacagattaagagatggaactggaagtcaa
atgttacagaaaattgaaaatggaagatttgcaaaactcagatatattgcacatgctatg
gtcaacagtacagatctgttaatggtgacaaagagtggtgtcttatttgtgacaaaaggg
acatttggacagttgacatgtgagtggcaatacacttatgatgaatttacgaaagaacca
ttcattgttgatggcagaagattacgcattgaagcaaaggaacgagtaaagtctgtgttc
cacgccaaagaatttggaaaaattattaacttcaaaagtccagaggatgctaagtggatc
ctttctaaattggaagaagtgagagagaatcggccaaaatcataa
DBGET
integrated database retrieval system
