Numida meleagris (helmeted guineafowl): 110389592
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Entry
110389592 CDS
T06015
Symbol
MSH3
Name
(RefSeq) DNA mismatch repair protein Msh3 isoform X1
KO
K08736
DNA mismatch repair protein MSH3
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110389592 (MSH3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nmel03400
]
110389592 (MSH3)
DNA repair and recombination proteins [BR:
nmel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
110389592 (MSH3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_22
Motif
Other DBs
NCBI-GeneID:
110389592
NCBI-ProteinID:
XP_021235958
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Position
Z:complement(63488076..63604367)
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AA seq
1096 aa
AA seq
DB search
MQRGRRREQGGGGQPVLSRFFGAAGSGAARHTASEIGTKRRTSAENNEPCEKKTKSVQST
IDDIYKPVKTQDKKEPQTCEKPRICLQTLDRLREFYSDSDQPCNRVQEDSFQEKQSMILE
KCPNITGRSPELNNPLQCGDTSPKVAQKEEPHCDLSQFSASFRSYENTSDLNLNKRTKTI
YTPLELQFIEMKKRYKDAVLCVECGYKYRFFGEDAEIAAKELNIYCHQDHNFMTASIPTH
RLFVHVRRLVAKGHKVGVIKQMETAALKAAGENKSSLFSRKLTALYTKSTLIGEDVNPLL
KVDDSVDFEEVATDVPDNYLLCICENGENVKNRKKGDIAVGVMAIQPTTGEVVFDSFWDC
ASRLELESRLLRLQPVELILPSSLSDQSEKLINSVTSMRLRDDRIRIERMENHHFEYSHA
FQLVTDFYAKEVPDITGSQKLSVILSLDKSVICALAAVIAYLKEFNLEKMLYNPSNFKQL
SSETEYMTINGTTMKNLEILQNQTDLKTKGSLLWVLDHTKTSFGRRRLKKWVIQPLMKSS
EINARLDAVSEILLSESSVFGQIQNLLCKLPDLERGLCSVFHKKCSTQEFFLIVSTLSRL
DLEIQALVPVIHSHVKSPLLQNALLEIPELLSPVKHYLKILNEEAAKTGDKTQLFKDLTD
FPVIRKKKEEILDVLSKIQLHLLEIRKQIKNPSAEYVTVSGQEFLVEVKNSHISSVPSSW
VMVSSTKAVSRFHSPFIIENYRHLNQLREQLVLDCGAEWLRFLDHFSEHYHPVSKAIGHL
ATIDCLFSLAQVAKQGDYCRPVVKDNEQEIIIKNGRHPVIDVLLGEQDQYVPNTTNLSRD
GERVMIITGPNMGGKSSYIKQVALITVMAQIGSYVPAEESTIGVVDGIFTRMGAADNIYK
GRSTFMEELTDTAEIIRKATSRSLVILDELGRGTSTHDGIAIAYATLEHFITDVESLTLF
VTHYPSVCELEKVYPEKVGNYHMAFLVNEEESAEQKGSEEEENPEFITFLYQITKGVTAR
SYGLNVAKLADIPKEILKKAAHKSKELERLVNMKRKKLKSFAEVWKINDSQELQKWKTMC
EPGDERKDSFQSSNHA
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcgggcggcggcgggagcagggcggcggcgggcagccggtgctgagccgcttc
ttcggcgcggcggggagtggtgccgcccggcacacggcttctgaaattggtacaaaaagg
agaacatcagctgaaaacaatgaaccatgtgagaagaagaccaagtcagtacaaagtact
atcgatgacatctataaaccagtgaagactcaggataaaaaagaacctcagacgtgtgaa
aagccccgcatatgtttacaaactctagacagactgagagaattctacagtgattcagac
cagccatgtaacagagtccaggaggacagttttcaggagaaacaatcaatgattttggag
aagtgtcccaatattactgggagaagtccggaactgaataaccctcttcagtgtggggac
actagcccaaaggttgctcagaaggaggagccacactgtgatcttagtcagttttctgca
tcttttagaagctatgaaaatacttcagacttaaatctcaataagagaaccaaaaccatt
tacactccactggaacttcaattcatagaaatgaagaaacggtataaagatgctgttttg
tgtgtggagtgtggatacaaatatcgcttctttggagaagatgcagagattgcagctaaa
gagctaaacatttactgtcatcaggatcataactttatgacagccagtataccaactcac
agactgtttgtccatgtgcgacgacttgtagcaaaaggacataaggttggagtaattaaa
cagatggaaactgcagcactgaaggctgctggagaaaataaaagctctctcttcagccgg
aaactgactgctctctatacaaagtctacgcttattggagaagatgtgaaccctttgctg
aaggtagatgattctgtagattttgaagaggtagcaacagatgtccctgataactacctc
ctctgtatttgtgaaaatggagaaaatgtaaaaaacagaaagaaaggtgacattgctgta
ggtgttatggcaatccaaccaactacgggagaagttgtttttgacagtttttgggattgt
gcatctcgcttagaattagagagtcggcttttacgcctgcagccagttgaactaatactt
ccatccagcttgtcagatcaatctgaaaagctcatcaacagtgtaacctccatgaggtta
cgagatgacagaattaggatagaaaggatggaaaaccaccattttgaatacagtcacgct
ttccaactggttactgatttttatgcaaaagaagtgcctgatattacaggttctcaaaaa
ctatctgtaattctaagcttggataagtctgttatttgtgctctggcagcagtaattgca
tacctcaaagaatttaatttggaaaagatgctttacaatccaagcaatttcaaacagttg
tcaagtgaaactgaatacatgacaattaatggaacaacaatgaaaaatcttgaaatttta
cagaatcagactgatttgaaaacaaaaggaagcctgctctgggtcttggatcatactaaa
acttcctttggtcgtcggagactgaagaaatgggtaattcaaccactcatgaaatccagt
gaaataaatgcccggcttgatgctgtgtctgaaattctcctgtcagaatccagcgtgttt
ggccagattcagaatcttctttgtaagctgccagatttagagagaggcctctgcagtgtt
tttcacaaaaagtgttcaacccaagaattcttcttgatagtcagcactctgtcccgtctg
gacctggaaattcaagctcttgttccagtcatacactctcatgtgaaatctcctctctta
caaaatgcactgttggaaattccagaacttctctccccagtaaaacattatttaaagatt
cttaatgaagaagcagctaagactggagataaaacccaactattcaaagaccttacagat
ttccctgtcatcagaaagaaaaaggaagagatcttggatgtgctgtctaaaatccaatta
catcttctggaaatacgtaaacaaatcaagaatccttctgcagagtatgttacagtttct
ggtcaagagtttttggtagaagtcaaaaattcccatatatcatctgtgccgtctagctgg
gttatggttagtagcacaaaagctgtcagccgattccactctccttttattatagaaaat
tacagacatctcaatcagcttcgggagcagctagtccttgactgcggtgctgaatggcta
cgttttctagaccattttagtgaacattatcaccctgtatctaaagcgattggtcaccta
gcaactatcgactgtctgttctcactggcacaggtggctaaacaaggagactactgcaga
ccagtggtaaaagataatgagcaagaaataattataaaaaatggcaggcaccctgtgatt
gatgtactactgggagaacaggatcagtatgttccaaacaccactaacctatcaagagat
ggtgaaagggtcatgataataactggacccaacatgggaggaaagagctcctatattaag
caagttgccttgatcacagtcatggcacagattggttcctacgttcctgcagaggagtca
acaattggtgttgtggatggtatctttaccagaatgggtgctgcagataacatttacaaa
ggccgaagtacctttatggaggaactcacagatactgctgagataataagaaaagcaact
tcaagatcactagtaattttggatgaactgggaagaggaactagcacacatgatggaatt
gctattgcttatgctacacttgaacattttattacagatgtggagtcgctaacattgttt
gtcacgcactatccttcagtttgtgagctagaaaaagtgtatccagaaaaagttggtaat
taccatatggctttcttggtgaatgaggaagaaagtgctgaacagaaaggatctgaagag
gaagagaatcctgaatttatcacttttctttatcaaataactaaaggagtcactgcaaga
agctatgggctaaatgttgccaaactggcagatattcccaaagaaatcttgaagaaggca
gctcacaaatcaaaggagttagagagactggtgaatatgaaaaggaaaaagctgaagtct
tttgctgaagtatggaaaataaatgattctcaggaactacagaaatggaaaaccatgtgt
gaacctggagatgaaagaaaggacagttttcaatcatcaaatcatgcttaa
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