Numida meleagris (helmeted guineafowl): 110390091
Help
Entry
110390091 CDS
T06015
Symbol
SMARCA2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110390091 (SMARCA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmel03021
]
110390091 (SMARCA2)
03036 Chromosome and associated proteins [BR:
nmel03036
]
110390091 (SMARCA2)
Transcription machinery [BR:
nmel03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
110390091 (SMARCA2)
Chromosome and associated proteins [BR:
nmel03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
110390091 (SMARCA2)
Chromatin remodeling factors
BAF complex
110390091 (SMARCA2)
PBAF complex
110390091 (SMARCA2)
GBAF(ncBAF) complex
110390091 (SMARCA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
110390091
NCBI-ProteinID:
XP_021236946
LinkDB
All DBs
Position
Z:26806532..26914939
Genome browser
AA seq
1568 aa
AA seq
DB search
MSTPTDSGAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVPHQMPAM
GPTDYPQEGMHQMHKSIDGLHEKGMVEDVHCSSMKTMRPPHPGMAPPQSPMDQHSQGYMS
PHPSPLGAPEHVSSPMSGGGPTPPQMTPSQPGPIIPGDPQVMSQPNRGPSPFSPVQLHQL
RAQILAYKMLARGQPLPENLQLAVQGKRTLPGIQQQQPPSAFNRQSGIGMHAMSGAATGP
GPAAGIPGHTAAITPKTWNEGQTPDMSVSSAPQKLPAPSPSGRPSPAPTAAQPAAAMPGP
SVPQPPPGQPSPIVQLQQKQNRISPIQKPQGLDPVEILQEREYRLQARIAHRIQELENLP
GSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSKRQTLRE
ARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKAVATWHA
NTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVANLTNLVW
EHKQAQAAKEKKKRRRRKKKAEENAEGMASGLGPDGEPIDESSQMSDLPVKVTHTETGKV
LLGPEAPKASQLDAWLEMNPGYEVAPRSDSEDESGSEYEEEDDEEESSRLEADEKILLDP
NSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAITERVEKQSSLLINGTL
KHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLIIVPLST
LSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHILAKIR
WKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLLPTIFK
SCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPEKVEY
VIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHPYMFQH
IEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLMTIMED
YFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIF
DSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMF
DQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMDRRRED
ARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDALTEKQ
WLRAIEDGNLEEMEEEVRLKKRKRRRNVDKDSGKEDGEKAKKRRGRPPAEKLSPNPPKLT
KQMNAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYR
SLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNDDEDD
DDEEESESESKSVKVKIKLNKKDEKSREKGKGKKRQSRAKAKPVVSDDDSDEDQDENDQS
EASGSDDE
NT seq
4707 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcccacagactctggtgccatgcctcatcctggtccttcccctggaccaggg
ccttcacctggaccgattctaggacctagcccaggaccagggccatctcctggctcagtt
cacagcatgatggggccaagtcctggtccacccagtgtcccgcatcaaatgccagcaatg
gggccaactgattatccacaggaaggcatgcaccaaatgcataagtccattgatggcttg
catgagaaaggaatggttgaagacgttcactgcagctccatgaagactatgcgacctcct
caccctggaatggccccacctcagagtccaatggaccagcatagccaaggttatatgtct
ccacacccgtctccactaggagcaccagagcatgtgtccagtccaatgtctggaggaggc
ccaactccaccccagatgactcccagccaaccaggacctattatacctggagacccacaa
gttatgagtcaacccaacagaggtccttcccctttcagccctgtacagctgcaccaactt
cgggctcagattcttgcatacaaaatgttagctagaggtcagcctttaccagaaaacctg
cagcttgctgttcagggaaaacggacccttcctggcattcaacagcagcagcctcccagt
gccttcaacagacagtctggtattgggatgcatgcaatgagtggtgctgcaactggacca
gggcctgctgcaggaatacccggacatacggctgccattacccctaaaacttggaatgaa
ggccaaaccccagatatgagcgtctccagtgcaccgcagaagcttcctgcaccgtcccct
agtgggaggccttctcctgcccccactgctgcccagcctgctgctgctatgcctgggcct
tctgtaccgcagccaccacctggacagccttctcccattgttcagctgcagcaaaagcag
aatcgcatcagccctattcaaaagccgcaaggattagaccctgttgaaattcttcaagaa
cgtgaatataggcttcaggcacgaattgctcacagaatccaggaactggagaacttgcct
ggttctctgccccctgatctgcgaaccaaagcgacagtggagttgaaggcacttaggtta
ctgaatttccagcgccagttgagacaagaggtagtagcttgcatgcgtcgtgatacaaca
ttagagacagcactgaactccaaggcctacaagcgaagcaagcgccagactttgagggag
gcccgtatgacagaaaaacttgagaaacagcagaagatagaacaggagaggaagcgtaga
cagaagcatcaggaatacctgaacagcatattgcaacatgctaaagatttcaaagagtac
catcggtcggtggctggcaaaattcagaaactttctaaagctgtggcaacttggcatgcc
aacactgaacgtgagcagaagaaagaaactgagagaattgagaaagaaagaatgaggagg
ctaatggctgaagatgaagaaggctaccgtaagctgattgaccaaaagaaagatagacgc
ctggcctacctattgcagcagacagatgagtatgttgctaacttgactaatctggtatgg
gaacataaacaggcacaagcagccaaagaaaagaagaagaggaggagaagaaagaagaag
gctgaagaaaatgcagagggcatggcatctggtcttggtcccgatggagagcccatagat
gagagcagtcagatgagcgaccttccagtcaaagtgactcacactgaaacaggcaaagtt
cttcttggtccagaagcaccaaaagcaagtcagctcgatgcttggctggaaatgaaccct
ggctatgaagttgctcccaggtcagacagtgaagatgaaagtggttctgaatatgaggag
gaggatgatgaagaagaatcaagcagattagaagcagatgagaagatactcctggatcct
aacagtgaagaagtttctgagaaagatgctaagcaaatcattgagacagccaaacaagat
gtggatgatgaatacagtatgcaatatagtgctagagggtctcagtcatactacacagtt
gcacacgcaatcacagaaagggtggaaaaacagtcttctcttctaattaatggcacacta
aaacattatcagcttcagggactggaatggatggtttcactctataataacaatctgaat
gggattttagctgatgaaatgggactgggaaagactatacagactattgcacttatcact
tacttgatggagcacaaaaggctcaatggcccctatctcatcatcgttcccctttcgacg
ttatccaactggacatatgaatttgacaaatgggctccttctgtggtgaagatatcttac
aagggcacacctgcaatgcgccgctcacttgttcctcagcttcgaagtggaaaatttaat
gttcttttaactacttatgagtacataataaaggacaaacatatccttgctaagattcga
tggaaatacatgatagtagatgaaggtcatcgaatgaagaatcatcactgcaagctgact
caggtcttgaacactcactacgtggcccctaggcgaatactactgacggggacaccattg
cagaataaattgcctgaactgtgggctcttctcaatttccttctcccaactattttcaag
agctgtagcacctttgaacagtggttcaacgctccatttgccatgacaggagaaagggtg
gacttaaatgaagaagaaactattcttatcatccgtcgtctccacaaagtactccgaccc
ttcttgctgagaagactgaagaaagaagttgagtctcaactgccagaaaaggtggaatat
gtgatcaaatgtgatatgtctgctctccagaagatcctgtaccgacacatgcaggccaag
ggaattcttcttacagatggttctgagaaagacaagaagggaaaaggtggcgcaaaaact
cttatgaacaccatcatgcaactgagaaagatatgcaatcatccatatatgtttcagcat
attgaggaatcgtttgctgaacatttaggctactcaaatggcgtcatcaacggagctgaa
ctttatcgggcctcagggaagtttgagctacttgatcgcattctaccaaagttacgagct
acaaaccatcgtgtgcttcttttctgtcaaatgacatcacttatgaccattatggaagac
tactttgcctttcgaaatttcctctacttgcgtcttgatggcacaacgaaatcagaagat
cgagctgctctcttaaagaagttcaatgagcctgggtcacaatactttatcttcttgctg
agtaccagggctggagggctaggcttgaatctccaggctgctgatacagttataatcttc
gatagtgactggaatcctcaccaggacttgcaggcacaagatagagctcaccgaattggt
cagcagaatgaagttcgagttctgcgactatgcactgtgaacagcgtggaagagaagatt
cttgctgctgcaaagtataagttgaatgtagatcaaaaagttattcaggctggaatgttt
gatcagaagtcttcaagtcatgaaaggagggcttttctgcaggctatactggagcatgaa
gaagaaaatgaggaggaagatgaagttcctgatgatgagactctgaatcagatgattgct
cgacgtgaggaggaatttgatctctttatgcgtatggacatggaccgtcgtagagaggat
gccagaaaccccaagcgcaagccccgcttgatggaggaggatgaattgccatcttggatt
attaaggatgatgctgaagttgaaaggctcacatgtgaagaagaggaagaaaagatattt
ggaagaggatcccgtcaacgcagggatgtggattatagtgatgctctcacagagaaacag
tggctgcgggcaatcgaagacggcaatttggaagaaatggaagaggaagtacggcttaaa
aagcggaagagaagaagaaatgtggataaggattctggaaaagaggatggagagaaagca
aagaaaagaagaggcagacctcctgcagaaaaattgtcacctaacccacctaaactgaca
aaacaaatgaatgctatcattgatacagtgataaactacaaagacagttctggacggcag
ctaagtgaagtctttattcagcttccatcaaggaaagaactaccagagtactatgaattg
attaggaaaccggtggacttcaaaaaaattaaggaaagaattcgcaaccataaatatcgg
agtcttggggacctggagaaggatgtcatgttgctgtgtcataatgctcagacattcaat
ctggagggatcacagatctatgaggattccattgttcttcagtctgtgttcaaaagtgca
cgacagaagattgccaaagaagaagaaagtgaggatgaaagcaatgatgatgaagatgat
gatgatgaagaggagtcagagtcagaatcaaaatcagtgaaagtcaaaatcaagctgaat
aagaaggatgaaaaaagtcgggagaaaggaaaaggcaagaagaggcaaagccgagcaaaa
gccaaacctgttgtgagtgatgatgatagtgatgaggatcaagatgaaaatgaccagtcg
gaagcaagcggaagtgatgatgagtga
DBGET
integrated database retrieval system
