Numida meleagris (helmeted guineafowl): 110390877 Help Entry 110390877         CDS       T06015                                  Symbol COL2A1 Name (RefSeq) collagen alpha-1(II) chain   KO K19719   collagen type II alpha Organism nmel  Numida meleagris (helmeted guineafowl) Pathway nmel04510   Focal adhesion nmel04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:nmel00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     110390877 (COL2A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     110390877 (COL2A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:nmel00536]     110390877 (COL2A1) Glycosaminoglycan binding proteins [BR:nmel00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    110390877 (COL2A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  110390877 NCBI-ProteinID:  XP_021238103 LinkDB All DBs Position Unknown AA seq 1464 aa AA seqDB search MWEEAAVRARLPQQLTLVLFSRVRNLSCPPHPHACGPASASFASGGAPNPPVPPSLTSCP SSLFISHYFFPFPTGQPGPKGQKGEPGDIKDVVGPRGPPGPQGPAGEQGQRGDRGEKGEK GAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGGAQMGVMQGPM GPMGPRGPPGPTGAPGPQGFQGNPGEPGEPGAAGPMGPRGPPGPPGKPGDDGETGKPGKS GERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGAKGESGSPGENGSPGPM GPRGLPGERGRPGPSGAAGARGNDGLPGPAGPPGPVGPAGAPGFPGAPGSKGEAGPTGAR GPEGAQGPRGESGTPGSPGPAGAPGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPPGPQ GATGPLGPKGQTGEPGIAGFKGEQGPKGETGPAGPQGAPGPAGEEGKRGARGEPGAAGPV GPPGERGAPGNRGFPGQDGLAGPKGAPGERGPAGLAGPKGASGDPGRPGEPGLPGARGLT GRPGDAGPQGKVGPTGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEKGLP GAPGLRGLPGKDGETGAAGPPGPAGPVGERGEQGAPGPSGFQGLPGPPGPPGESGKPGDQ GVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGPRGLPGTPGTDGPKGATGPAGPNGAQ GPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGARGLTGPIGPPGPAGPNGEK GESGPPGPSGAAGARGAPGERGEPGAPGPAGFAGPPGADGQPGAKGEQGEPGQKGDAGAP GPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGPNGNPGPPGPPGSA GKDGPKGARGDAGPPGRAGDPGLQGPAGPPGEKGEPGEDGPAGPDGPPGPQGLAGQRGIV GLPGQRGERGFPGLPGPSGEPGKQGAPGSAGDRGPPGPVGPPGLTGPAGEPGREGNPGAD GPPGRDGAAGVKGDRGETGPVGAPGAPGAPGAPGPVGPTGKQGDRGETGAQGPMGPSGPA GARGMPGPQGPRGDKGETGEAGERGLKGHRGFTGLQGLPGPPGPSGDQGAAGPAGPSGPR GPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGEPGPAGPPGNPGPPGPPGPPGTGIDMSAF AGLGQTEKGPDPIRYMRADEAAGGLRQHDVEVDATLKSLNNQIESIRSPEGSKKNPARTC RDIKLCHPEWKSGDYWIDPNQGCTLDAIKVFCNMETGETCVYPTPSSIPKKNWWTSKTKD KKHVWFAETINGGFHFSYGDENLSPNTASIQMTFLRLLSTEGSQNVTYHCKNSIAYMDEE TGNLKKAILIQGSNDVEIRAEGNSRFTYSVLEDGCTKHTGKWGKTVIEYRSQKTSRLPIV DIAPMDIGGADQEFGVDIGPVCFL NT seq 4395 nt NT seq  +upstreamnt  +downstreamnt atgtgggaggaagcggccgtgcgcgccaggcttccccagcagctgaccctggttctgttc tctcgtgtccgtaacctttcatgtcccccccatccccacgcgtgtggccccgcttccgcg agctttgcttcagggggggccccaaaccccccagtgccccccagtttgaccagttgcccc tcctcactcttcatttctcattatttctttcccttcccaacaggacaacctggcccaaag ggacagaagggcgaacctggcgacattaaagatgttgtaggaccccgagggcctccggga ccacagggcccggcaggagagcagggacagcgaggggaccgtggcgagaagggggagaag ggtgctcccggcccccgtggaagggatggagaacctggcacccctgggaaccccggcccc cccggcccacccggacctcctggcccccccggacttggtggaaactttgcggcacagatg gcgggcggcttcgacgagaaggcgggtggtgcgcagatgggtgtcatgcagggacccatg ggccctatgggaccccgcggcccccccggccccactggcgcacctggtccccaaggattt caaggcaatcccggtgagcccggcgaacccggcgctgctggtccgatgggtccccgggga cctccgggaccacctgggaaacccggtgacgacggtgagacaggcaaacccggcaaatcc ggcgaacgtggcccccccggcccccagggcgctcgtggcttccctgggactcccggtctc cccggagtgaaaggccaccgaggctaccccggtttggacggtgccaaaggagaagcgggg gctcccggagccaagggtgaatctggttccccgggtgagaacggctcccccggccccatg ggaccccgagggctgcctggagagagaggacgtcccggcccctccggtgctgcgggtgct cgtggcaatgacggtctccccggccctgctggaccccctggacctgttggccctgccgga gcccccggcttccccggagcccccggttcaaagggtgaagctggccccactggagcacgg ggtcctgagggtgcccaaggaccccgcggcgaatctggaacccccggctctcccggcccc gctggcgcacccggtaacccagggactgatggcatccccggtgccaagggctcagcgggt gccccaggcattgcaggcgctccaggattccccggcccacgcggcccccccggaccccaa ggtgccaccggacccctgggacccaagggacagacgggcgaacccggcatcgcaggcttc aagggtgaacaaggaccaaagggtgagacgggacccgcaggaccccaaggtgcccccggg ccggctggcgaggaaggcaagagaggagctcgtggtgaacctggtgccgctggccctgtg ggcccccccggagaaaggggcgcacccggcaatcgtggattccccgggcaggatgggttg gctggacccaagggtgctccaggtgaacgtggccccgctggtctcgccggtcccaaaggt gccagcggtgaccccggacgtccaggagagcccgggctgcccggagcgaggggtctcacc ggccgccccggagatgcgggacctcaaggcaaagtcggtccgactggtgctcccggcgag gatggccgccccggcccccctggcccgcaaggtgctcgtgggcagcccggtgtgatgggt ttccctggtcccaaaggcgctaatggtgagcctggaaaagccggagagaaaggactgccc ggcgccccagggctgcggggtcttcctggcaaggatggggagacaggagctgccggcccc cccggacccgctggtcctgtgggtgagagaggagagcaaggagctcccggtccctctggt ttccagggactgcccggaccaccaggtccccccggggagagtggcaaacccggagaccag ggagttcctggagaagctggtgccccaggtcttgttggtcccagaggtgaacgtggattc cccggtgaacgcggctctcccggtgcccaagggctgcagggtccccgcgggctccccgga acgcccggcaccgacggacccaagggtgcaaccggtccggctggccccaacggcgcccag ggtcccccagggctgcagggaatgcccggtgagagaggagcagctggcattgctggcccc aagggtgaccggggagacgtcggtgagaagggacctgagggagctccgggcaaggacggc gcacgtggtctgacgggtcccattggcccccctggccccgctggccccaacggcgagaag ggtgaatccggccctcctggtccatctggtgctgccggtgcccgtggtgctcccggtgag cgtggcgagcctggtgcccctggtcctgctggatttgctggcccaccgggtgccgatgga caacccggtgccaaaggcgagcagggagagcctggacagaagggtgatgccggcgctccc ggtccccagggtccctccggtgcacctggccctcagggtccaactggtgtcactggtccc aaaggagctcgcggggctcagggtccccctggagccacaggattccctggagctgccggc cgtgtgggaccacctggccctaatggtaacccaggcccccccggaccccctggctctgct ggcaaagacggccccaagggtgctcgtggcgatgccggccctcctggccgtgctggtgac cctggactccaaggccccgccggcccccccggcgagaagggtgaacccggcgaggacggc cccgcgggtcctgacggcccccccggtcctcaaggcttggcaggacagcgtggtatcgtg ggtctcccaggacagcgcggtgagagaggcttccctggactgccagggccatcgggcgaa cctggaaagcaaggagcacctggctctgcaggcgaccgaggtccccccggccccgtgggc ccccccgggctgacaggtcccgccggcgaacccgggcgcgagggcaaccctggtgctgac ggaccccctggcagggatggtgcagccggcgtgaagggcgatcgcggtgagaccggcccc gtgggtgcccccggtgctcccggagcccccggcgctcccggccccgttggtcccactggc aaacaaggagacagaggcgagacgggtgcacaggggcccatgggtccctctggtcctgct ggagctcgaggaatgccgggaccccaagggcctcgtggtgacaaaggtgagacgggagag gctggagagagagggctgaagggccaccgcggcttcaccggtctgcagggtctgcccgga ccacctggcccttctggagaccaaggtgctgctggtcccgctggtccctccggtcccaga ggtccccctggtcctgtcggcccctctggcaaagacggctccaacggcatgcccggcccc atcggtcctcccggtccccgcggacggagcggtgaacctggccctgcgggtcctcctgga aaccccggtcctcctggtcctcccggccccccgggcaccggcatcgacatgtccgctttc gctggactgggtcagacagagaagggccctgaccccatccgctacatgcgggcggacgag gcggccgggggcctgcggcagcacgacgtcgaggtggacgccacgctcaagtccctcaac aaccagatcgagagcatccgcagccccgagggttccaagaagaacccagccaggacctgc cgcgacatcaagctctgccatcccgagtggaagagcggagattactggattgacccgaac cagggctgcaccttggacgccatcaaagttttctgcaacatggagacgggcgagacctgc gtctacccaacccccagcagcatccccaagaagaactggtggaccagcaagacaaaagac aagaagcacgtctggtttgcggagaccatcaacggcggtttccacttcagctacggcgat gagaacctgtctcccaacaccgccagcatccagatgaccttcctccgcctcctgtccacc gagggctcccagaacgtcacctaccactgcaagaacagcatcgcctacatggacgaggag acgggcaacctgaagaaagccatcctcatccagggatccaacgacgtggagatcagagct gagggcaacagcaggttcacgtacagcgtcctggaggacggctgcacgaaacacactggc aaatggggcaagacggtcatcgagtaccggtcgcagaagacctcgcgcctgcccattgta gatattgcacctatggacattggcggagccgatcaggagtttggcgtggatattggccca gtctgcttcttgtaa

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