Numida meleagris (helmeted guineafowl): 110391322
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Entry
110391322 CDS
T06015
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03020
RNA polymerase
nmel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
110391322 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
110391322 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmel03021
]
110391322 (POLR2A)
03400 DNA repair and recombination proteins [BR:
nmel03400
]
110391322 (POLR2A)
Enzymes [BR:
nmel01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
110391322 (POLR2A)
Transcription machinery [BR:
nmel03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
110391322 (POLR2A)
DNA repair and recombination proteins [BR:
nmel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
110391322 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_6
RNA_pol_Rpb1_2
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
110391322
NCBI-ProteinID:
XP_021238821
LinkDB
All DBs
Position
Unknown
AA seq
1534 aa
AA seq
DB search
MTFAEIVTPFNIDRLQELVRRGNSQYPGAKYIIRDNGDRIDLRFHPKPSDLHLQTGYKVE
RHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWSTFRLNLSVTTPYNADFDGDEMNLHLPQ
SLETRAEIQELAMVPRMIVTPQSNRPVMGIVQDTLTAVRKFTKRDVFLERGEVMNLLMFL
STWDGKVPQPAILKPRPLWTGKQIFSLIIPGHINCIRTHSTHPDDEDSGPYKHISPGDTK
VVVENGELIMGILCKKSLGTSAGSLVHISYLEMGHDTTRLFYSNIQTVINNWLLIEGHTI
GIGDSIADAKTYQDIQNTIKKAKQDVIEVIEKAHNNELEPTPGNTLRQTFENQVNRILND
ARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKINISQVIAVVGQQNVEGKRIPFGFKHRTL
PHFIKDDYGPESRGFVENSYLAGLTPTEFFFHAMGGREGLIDTAVKTAETGYIQRRLIKS
MESVMVKYDATVRNSINQVVQLRYGEDGLAGESVEFQNLATLKPSNKAFEKKFKFDYTNE
RALRRTLQEELVKDILSNAHIQNELEREFEKMREDREVLRVIFPTGDSKVVLPCNLLRMI
WNAQKIFHINSRLPSDLHPVKVVEGVKELSRKLVIVNGEDPLSRQAQENATLLFNIHLRS
TLCSRRMVEEFRLSGEAFDWLLGEIESKFNQAIAHPGEMVGALAAQSLGEPATQMTLNTF
HYAGVSAKNVTLGVPRLKELINISKKPKTPSLTVFLLGQSARDAERAKDILCRLEHTTLR
KVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMPDFDVSRISPWLLRIELDRKHMTDRKLT
MEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDENKMQEEEEVVDKMDDDVFLRC
IESNMLTDMTLQGIEQISKVYMHLPQTDNKKKIIITEDGEFKALQEWILETDGVSLMRVL
SEKDVDPVRTTSNDIVEIFTVLGIEAVRKALERELYHVISFDGSYVNYRHLALLCDTMTS
RGHLMAITRHGVNRQDTGPLMKCSFEETVDVLMEAAAHGESDPMKGVSENIMLGQLAPAG
TGCFDLLLDAEKCKHGMEIPSAIPGLGVGGSTGMFFGSAPSPMGNMSPAMTPWNQGATPA
YGAWSPSVGSGMTPGGAGFSPSAASDASGFSPGYSPAWSPTPGSPGSPGPSSPYIPSPGG
AMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPSYSPTS
PSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYS
PTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPNYSPTSPNYTPTSPSYSPTSP
SYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPTSPSYSPSSPRYTPQSPTYTPSSPSYSP
SSPSYSPSSPKYTPTSPSYSPSSPEYTPTSPKYSPTSPKYSPTSPKYSPTSPTYSPTSPK
GSTYSPTSPGYSPTSPTYSLTSPAISPDDSDDDN
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcgccgagatcgtcacccccttcaacatcgaccggctgcaggagctggtgcgg
cgcgggaacagccagtacccgggcgccaagtacatcatccgtgacaacggggaccgcatc
gacctccgcttccaccccaagcccagcgacctgcacctgcagaccggctacaaggtggaa
cgccacatgtgtgacggtgacatcgtcatcttcaaccgccagcccacgctgcacaagatg
tccatgatggggcaccgcgtgcgcatcctgccctggtccaccttccgcctcaacctcagc
gtgacgactccgtacaacgcggactttgacggggacgagatgaacctgcacctgccgcag
tcgctggagacgcgggccgagatccaggagctggccatggtgccgcgcatgatcgtgacg
ccgcagtccaaccgcccggtgatgggcatcgtgcaggacacgctcaccgccgtgcgcaag
ttcaccaagcgcgacgtcttcctcgagcgcggggaggtgatgaacctgctgatgttcctg
tccacgtgggacgggaaggtgccgcagccggccatcctcaaaccgcgcccgctctggacg
gggaagcaaatcttctcgctcatcatccccgggcacatcaactgcatccgcacccacagc
acccaccccgacgacgaggacagcgggccctacaagcacatctcccccggggacaccaag
gtggtggtggagaacggggagctgatcatgggcatcctgtgcaagaagtcgctgggcacg
tcggccggctccctggtgcacatctcctacctggagatgggccacgacaccacgcgcctc
ttctacagcaacatccagaccgtcatcaacaactggctgctcatcgagggtcacaccatc
ggcatcggggactccatcgctgacgccaaaacgtaccaggacatccagaacaccatcaag
aaggccaagcaggacgtcatcgaggtgatcgagaaggcccacaacaacgagctggagccc
acgccgggcaacacgctgcggcagaccttcgagaaccaggtgaaccgcatcctcaacgac
gcccgtgacaaaaccggctcctccgcgcagaaatccctctccgagtacaacaacttcaag
tccatggtggtctcgggggctaagggctccaaaatcaacatctcccaggtgatcgcggtg
gtggggcagcagaacgtggaggggaagcggatcccgtttgggttcaagcaccgcacgctg
ccccacttcatcaaggacgactacggccctgagagccgcggcttcgttgagaactcctac
ctggcagggctcacccccaccgagttcttcttccacgccatgggtggccgcgagggtctc
atcgacaccgccgtcaagacggccgagaccgggtacatccagcgccggctgatcaagtcg
atggagtcggtgatggtgaagtacgatgcgacggtgcgcaactccatcaaccaggtggtg
cagctgcgctacggcgaggacgggctggcgggcgagagcgtcgagttccagaacctcgcc
accctcaagccctccaacaaagccttcgagaagaagttcaaattcgactacaccaacgag
cgcgcgctgcggcggacgctgcaggaggagctggtgaaggacatcctcagcaacgcccac
atccagaacgagctggagcgcgagttcgagaagatgcgcgaggaccgcgaggtgttgcgc
gtcatcttccccaccggcgacagcaaggtggtgctgccctgtaacctgctgcgcatgatc
tggaacgcgcagaaaatctttcacatcaactcgcgcctgccctccgacttgcaccccgtc
aaggtggtggaaggcgtgaaggagctgagccgcaagctggtgattgtcaacggggaggac
ccgctgagccggcaggcgcaggagaacgccacgctgctcttcaacatccacctgcgctcc
acgctctgcagccgccgcatggtggaggagttccgcctgagcggggaggccttcgactgg
ctgctgggcgagatcgagtccaagttcaaccaggccatcgctcaccccggcgagatggtg
ggcgcgctggcggcgcagtccctgggggagccggccacacagatgaccctcaacacgttc
cactacgccggcgtgtcggccaagaacgtgacgctgggcgtcccccgcctcaaggagctc
atcaacatctccaaaaaacccaaaactccgtctctcaccgtcttcctgctcggccagagc
gcccgcgacgccgagcgcgccaaggacatcctgtgccgcctggagcacaccaccctgcgc
aaggtgacggccaacaccgccatctactatgaccccaacccgcagagcacggtggtggcc
gaggaccaggagtgggtcaacgtgtactacgagatgcccgacttcgacgtcagccgcatc
tcaccgtggctgctccgcatcgagctcgaccgcaagcacatgaccgaccgcaagctgacc
atggagcagatcgccgagaagatcaacgccggttttggggacgacctcaactgcatcttc
aacgacgacaacgccgagaagttggtgctgcgcatccgcatcatgaacagcgacgagaac
aagatgcaggaggaggaggaggtggtggacaagatggacgacgacgtgttcctgcgctgc
atcgagtccaacatgctgactgacatgacgctgcagggcatcgagcagatcagcaaggtg
tacatgcacctgccgcagacggacaacaagaagaagatcatcatcacagaggacggggag
ttcaaggcgctgcaggagtggatcctggagaccgacggcgtcagtctgatgcgggtgttg
agcgagaaggacgtggacccggtgcgcaccacctccaacgacatcgtcgagatcttcacc
gtgttgggcatcgaggcggtgcgcaaggcgctggagcgggagctgtaccacgtcatctcc
ttcgacggttcctacgtcaactaccgtcacctggcgctgctgtgtgacaccatgacgtcg
cgcgggcacctgatggccatcacccggcacggcgtcaaccggcaggacaccgggccgctc
atgaagtgctcctttgaggagacggtggacgtgctgatggaggcggcggcgcacggcgag
agcgacccgatgaagggggtgtcggagaacatcatgctggggcagctggcccccgccggc
accggctgcttcgacctgctgctggatgccgagaagtgcaagcacgggatggagatcccc
agcgccatccctggcctgggtgtgggcggctctaccgggatgttcttcggctcagcgccc
agccccatggggaacatgtcccccgccatgacaccctggaaccagggggccacccctgcc
tatggggcctggtctcccagcgtgggcagcggcatgacccctgggggggccggcttctcc
cccagtgccgcttcagacgccagcggtttcagccccggttactcgcctgcctggtcaccc
acccccggctcccccggatccccggggccctccagcccctacatcccctccccaggtggg
gccatgtcccccagctacagccctacgtcacctgcctatgagccgcggtctcccgggggc
tacaccccgcagagccccagctacagccccacctctccgagctacagcccgacctcaccc
agctacagccccaccagccccaactacagcccgacttcgcccagctacagcccgacttct
cccagctacagccccacctcgcccagctacagccccacctcgcccagctacagcccaact
tcgcccagctacagcccgacctcacccagctacagcccgacctcgcccagctacagcccg
acttctccaagttacagcccaacttcgcccagctacagccccacatcacccagctacagc
ccgacttctcccagctacagcccaacctcacccagttacagccccacttctcccagctac
agccccaccagcccgagctacagcccgacttcgcccagctacagccccacatcccccaac
tacagccccacatcccccaactacaccccaaccagccccagctacagcccgacttctccc
agctacagccccaccagccccaactacaccccgacctcgcccaactacagccccacctcg
cccagctacagccccacctcgcccagctacagccccacatcccccagctactccccctcc
agtccccgctacaccccgcagtcgcctacctacacccccagcagccccagttacagcccc
agcagccccagctacagcccctcctcccccaagtacaccccgaccagcccctcctacagc
cccagctcccccgagtacaccccgaccagccccaagtacagccccacctcaccgaagtac
agccccaccagccccaagtacagccccacctctcccacctacagccccaccagccccaag
ggctccacctacagccccacatcgccgggctacagccccacgtcgcccacctacagcctg
accagcccagccatcagccccgacgacagcgacgacgacaactga
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integrated database retrieval system
