Numida meleagris (helmeted guineafowl): 110392259
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Entry
110392259 CDS
T06015
Symbol
UPF2
Name
(RefSeq) regulator of nonsense transcripts 2 isoform X1
KO
K14327
regulator of nonsense transcripts 2
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03013
Nucleocytoplasmic transport
nmel03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
110392259 (UPF2)
03015 mRNA surveillance pathway
110392259 (UPF2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmel03019
]
110392259 (UPF2)
Messenger RNA biogenesis [BR:
nmel03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
110392259 (UPF2)
mRNA cycle factors
P-body specific factors
110392259 (UPF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
110392259
NCBI-ProteinID:
XP_021240039
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Position
1:complement(6242928..6299621)
Genome browser
AA seq
1293 aa
AA seq
DB search
MPAERKKSANMDEKESLLNNKEKEFVERRPVSTREKPKDDVKVGVKRETVKVPEDKKKKL
DEDKRKKEDKERKKKEEDKVKAEEEQKKKEEEEKKKLEEEEKKKQEEEVKRQQEEAAAQL
KEKEEAHQLHQEAWERHQARKELRSKNQNAPDNRPEENFFSRLDSSLKKNTAFVKKLKTI
TEQQRDSLSHDFNSLNLSKYIAEAVASIVEAKLKISDVNCAVHLCSLFHQRYADFAPSLL
QAWKKHFEARKEEKTPNITKLRTDLRFIAELTIVGIFTDKEGLSLIYEQLKNIINADRES
HTHVSVVISFCRHCGDDIAGLVPRKVKTVAEKFNLSFPPSEIISPEKQQPFQNLLKEYFT
SLTKHLKRDHRELQNIERQNRRILHSKGELSEDRHKQYEEFAMSYQKLLANSQSLADILD
ENMPDLPQDKPTPEEHGPGIDIFTPGKPGEYDLEGGIWEDEDARNFYENLIDLKAFVPAI
LFKDNEKCSQSKDSSKDETRDSKDAKDNKETAPGSEDLELELENLDINDDPLELDCGDEA
EDLTKKLLDEQGKREGADSTGADSSDGKQAERKQEDEEASTGSHLKLIVDAFLQQLPNCV
NRDLIDKAAMDFCMNMNTKANRRKLVRALFIVPRQRLDLLPFYARLVATLHPCMSDVAED
LCSMLKGDFRFHVRKKDQINIETKNKTVRFIGELTKFKMFSKNDTLHCLKMLLSDFSHHH
IEMACTLLETCGRFLFRSPESHLRTSVLLEQMMRKKQAMHLDARYVTMVENAYYYCNPPP
AEKTVKKKRPPLQEYIRKLLYKDLSKVTTEKVLRQMRKLPWQDTEVKDYVICCMINIWNV
KYNSIHCVANLLAGLVLYQEDVGIHVVDGVLEDIRLGMEVNQPKFNQRRISSAKFLGELY
NYRMVESAVIFRTLYSFTSFGVNPDGSPSPLDPPEHLFRIRLVCTILDTCGQYFDRGSSK
RKLDCFLVYFQRYVWWKKSLDVWTKDHPFPIDIDYMISDTLELLRPKIKLCSSLEEAIRQ
VQDLEREFLIKLGLVNDKDSKDTITEGENLEEDEEEEEGGAETEEQSGNESEVNEPEEEE
GSDNEEEEGEEEEEENTDYLTDSNKENETDEENTEVMIKGGGLKHVPCAEDEDFIQALDK
MMLENLQQRSGESVKVHQLDVAIPLHLKSQLKKGPPLGSGEGESESGDTMPFVMLTRKGN
KQQFKILNVPMSSQLAANHWNQQQAEQEERMRMKKLTLDINERQEQEDYQEMLQSLAQRP
APANTNRERRPRYQHPKGAPNADLIFKTGGRRR
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgagcgcaaaaagtcagcaaatatggatgaaaaagaatctctgctaaataat
aaagaaaaagaatttgttgaaaggcgaccggtgagcaccagggagaagccaaaagatgac
gtcaaagttggggtaaagagagagactgtaaaggttcctgaagataaaaagaaaaaactg
gatgaggataaaagaaaaaaagaagacaaagagaggaagaaaaaggaagaggataaagta
aaggcagaagaagagcaaaagaagaaagaagaggaagaaaaaaagaaacttgaagaggaa
gagaaaaagaagcaagaggaggaagtcaaacgtcaacaagaagaagcagctgctcagctg
aaagaaaaagaggaagcacaccagttgcatcaggaggcttgggagcgccatcaggcaagg
aaagagcttcgcagcaaaaaccagaatgcaccagacaatcgtcctgaggaaaacttcttc
agcagactagactccagtctgaagaagaacacagcttttgttaagaagctaaaaaccatt
acggagcaacaaagggactccttgtcccacgattttaatagcctgaatttaagcaaatac
attgcagaagcagtagcttccattgtggaagccaaactgaaaatatcagatgtgaactgc
gctgtgcatttgtgttctctctttcaccagcgctacgctgattttgccccttccttactt
caggcttggaaaaagcattttgaagcaaggaaagaagagaagactcccaacattacaaag
ctaagaactgatttgcgtttcattgcagaattgactatagttgggattttcactgacaag
gaaggtttgtctttaatctatgagcaacttaaaaatattattaacgctgatcgagaatcc
cacactcatgtttctgtggttatcagcttttgtcggcactgtggagatgacattgctggt
ttggtaccaaggaaagtaaaaactgttgcagagaagtttaacttgagctttcctcctagt
gagataattagcccagagaaacaacagcccttccagaatttgttgaaggaatactttacg
tctttgaccaaacacctgaaaagggaccacagggagctacaaaatattgaaagacaaaac
aggcgcattcttcactccaaaggcgaactgagtgaagatcgacataagcaatatgaggaa
tttgcgatgtcgtatcagaaactgttggcaaattctcagtctctagctgatattctggat
gaaaatatgcctgaccttccccaggacaaaccaacacctgaggaacatggacctggcatt
gatattttcacaccaggaaagcctggagaatatgacctggaagggggtatctgggaagat
gaggatgctagaaacttctatgagaatctcattgacttgaaagcttttgtgccagcaatt
ttgtttaaagataatgaaaagtgttctcagagtaaggattccagcaaagatgaaacaaga
gattcaaaagatgccaaagataataaggaaacagctcctgggagtgaggatttggagttg
gagctggaaaacctggatattaatgatgatcccctggaactggactgtggagatgaagcg
gaagatcttacaaaaaagcttcttgatgaacaaggcaagagagagggagcagatagcacc
ggagctgacagtagtgacggaaaacaagctgaaagaaaacaagaggatgaagaagccagt
actggatctcatttaaaacttatagttgatgcttttcttcagcagcttccaaactgtgtg
aacagagacctcatagataaggcagccatggatttttgcatgaatatgaatacaaaagcc
aacagaagaaaactagtacgagcgcttttcatagttcctaggcaaaggttggatttgcta
ccattttatgcaaggctggttgccacattgcatccctgtatgtctgatgtagcagaggat
ctttgttccatgctgaaaggggatttcagatttcatgtaagaaaaaaggaccagatcaac
attgaaacaaagaacaaaactgtgagatttattggtgagcttaccaagtttaagatgttc
tccaaaaatgatactctccactgcttaaagatgcttctgtcagacttttctcatcaccat
attgaaatggcatgtactctgttggaaacctgtggaagatttctctttagatcaccagaa
tctcacttaagaaccagtgttcttttggaacaaatgatgagaaaaaaacaagcaatgcat
ctggatgcacgctatgttacaatggtagaaaatgcctattactactgtaatcctcctcca
gctgaaaaaactgtgaagaagaagcgtcctcccttgcaggaatacattcgtaagcttctc
tacaaggatctctcaaaggtcaccactgagaaggtcctgagacagatgcgcaagctgcct
tggcaggatacagaagtgaaagactatgttatatgctgcatgatcaacatctggaatgtg
aaatataatagcattcactgtgtagccaacctcttagcagggttggtcctttaccaggaa
gatgttggaattcacgttgtggatggagtgctagaggatattcgactaggaatggaggtt
aaccagccaaagtttaaccagcggcggatcagcagtgccaagttcttgggggagctttac
aattatcgaatggtggaatcagctgtaatatttcgaactctatattcattcacatcattt
ggtgtgaaccctgatggtagtcctagtccactggatcctccagagcatcttttcagaatc
agacttgtatgtacaatccttgatacctgtgggcagtattttgacagaggatccagcaaa
cgaaaacttgattgcttccttgtatactttcagcggtatgtttggtggaagaaaagtctg
gatgtctggacaaaagaccacccatttcctatagacattgactatatgattagtgacaca
ctggaactcctcagaccaaagataaagctctgcagttctctggaggaggctatcagacag
gtgcaagacttggaacgagaattcttaataaaactaggacttgtgaatgacaaagattcc
aaagataccataacagaaggagagaatctggaagaggatgaagaagaagaagaaggtgga
gcagagacagaggaacaatctggaaatgaaagtgaagtcaatgagccagaagaagaggag
ggctctgacaacgaggaggaggaaggcgaagaagaggaggaagaaaacactgattatctt
acagattctaataaggaaaatgaaacagatgaggaaaatacagaagtaatgattaaagga
ggagggcttaagcatgtcccttgtgcagaagatgaggacttcattcaggcattagataaa
atgatgctggaaaatcttcagcaacggagcggtgaatcagttaaagtacatcagctggat
gttgctattcctctacatctcaaaagccaactgaagaagggtcccccgcttgggagtggg
gaaggagagtcggagtctggagacaccatgccctttgtcatgttaacacgaaaaggcaac
aaacagcagtttaagatcttaaatgtaccgatgtcttcccaacttgctgcaaaccactgg
aaccaacagcaagctgaacaggaggagagaatgcggatgaaaaagctcactttggatatc
aatgaacgccaagaacaagaagactaccaggaaatgttgcagtccctggcgcagcgtcca
gctccagcaaataccaatcgggagcggcggcctcgttaccagcatccaaagggagcacct
aatgcagatctaatctttaaaactggtgggaggagacgttga
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