Numida meleagris (helmeted guineafowl): 110392268
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Entry
110392268 CDS
T06015
Symbol
OPTN
Name
(RefSeq) optineurin isoform X1
KO
K19946
optineurin
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel04137
Mitophagy - animal
nmel04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110392268 (OPTN)
04137 Mitophagy - animal
110392268 (OPTN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nmel04131
]
110392268 (OPTN)
Membrane trafficking [BR:
nmel04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
110392268 (OPTN)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
110392268 (OPTN)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
110392268 (OPTN)
Xenophagy
Cargo receptors
110392268 (OPTN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NEMO
CC2-LZ
zf_C2H2_10
GSCFA
DUF6439
NPV_P10
EDR4-like_1st
PEPCK_GTP
Motif
Other DBs
NCBI-GeneID:
110392268
NCBI-ProteinID:
XP_021240066
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All DBs
Position
1:6735337..6755625
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AA seq
553 aa
AA seq
DB search
MSSKPQIRPAENGEHCSSKMENGMDSVAPPTLSTYTPEEMVQQMKELITENNELKEAMKL
HNQAMKDRYEELSIWREKQKEEREFYEAKFKEAKQCLLAKCVENEQLQQQLQSLKEREEG
AEMEGCAAPEKLKSKVQRLQAEKADLLAIISELQVKLNIASAEDSFVEIGMNEGEVNRTA
KENQDHSSEMASNVAVYVRSKSADESKNLESEELTVSQLLCCLRNETQRREKLEKELQDH
KERLSKMENETSNCLESGTQTNREEESSEAIGSEVESLKKQVCALFKELQDAHEKLKEAE
QIQKKLQEKCQVLERVNSAAATELEEKQQLIYTIKKLELQVESVQAEVKLEQAKTQEEKT
RYSSLQEAYNKLLPELTEAMKTISEMKVKELDRVDKVVVEELNAKVLLAEQALAAKQLQL
DEMKQLIAKQEEDLETMAVLRAQMEVYCSDFHAERAAREKIHEEKEQLAVQLAYLLKEQQ
NLQDLGRSSLAEMQNRHGARAPDREHSPRLVQRGTGSQEWPEQRNISIYSCPKCEEILPD
LDTLQIHVMDCIN
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcaagccgcagatccgtcctgctgaaaatggagagcactgcagcagtaaaatg
gagaatggaatggacagcgtggctccccccacactcagtacctacacacccgaagagatg
gtacagcagatgaaagagctgatcactgagaacaatgagttaaaagaagcgatgaagttg
cataaccaagctatgaaggaccgctacgaggagctttccatctggcgagagaagcagaaa
gaagaacgagaattttatgaggcgaagtttaaagaagctaagcagtgcctgctagccaag
tgcgttgaaaatgagcagctacagcaacaacttcagagcttaaaggaaagagaagaagga
gctgaaatggagggctgtgcagctcctgaaaaactcaagtccaaggtgcagcggctccag
gctgagaaggcagatctgttagccatcatttcagagctgcaggtcaagctgaacatcgcc
tcagcagaagactcctttgtggagattgggatgaacgaaggagaagtaaatagaactgca
aaagaaaatcaagatcatagcagtgaaatggccagtaacgtcgctgtctacgtcaggagc
aaatctgcagatgaatccaagaatttggaatctgaggagctaactgtgagccagctgctc
tgctgccttagaaatgaaactcagaggagggaaaaacttgagaaggagctgcaggatcac
aaagagagactttcaaagatggagaatgaaacaagcaactgcctggagagtgggacacaa
actaaccgggaagaagagagttcagaggctattggcagtgaagtagaaagcctgaagaag
caagtttgtgccctgtttaaagagctccaagatgcccacgagaagttaaaagaagcagaa
cagattcagaagaaacttcaagaaaagtgccaggtattggaaagagtaaactcagctgct
gcaacagaattggaggagaagcagcagctcatatacaccatcaagaagctggagcttcag
gtggagagtgtgcaggcagaggtcaagctagaacaagccaagacacaggaagaaaagaca
agatacagtagcttgcaggaggcttacaacaaactccttcctgaactcactgaagcaatg
aaaacaatcagtgaaatgaaagtcaaagagcttgacagggtggataaagttgtggtggaa
gaactgaatgcaaaggtgttgttggcagaacaagcccttgctgcaaagcagctccagttg
gatgaaatgaagcagctaattgctaagcaagaagaggaccttgaaaccatggctgtgctc
cgtgctcagatggaggtttattgctctgatttccatgccgagagggcagcaagagagaag
atccatgaggagaaggagcagttggctgtgcagctggcatacctcctgaaagagcagcaa
aaccttcaagatcttggccgaagctctttggcggagatgcagaatcgccacggagccagg
gcaccagatcgggagcactcacctcgccttgtccaaagaggaactggtagtcaagaatgg
ccagagcagcggaatatctcaatatattcctgtccaaaatgtgaagaaattctgcccgat
ctggacacactgcagattcatgttatggactgcattaattga
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