Numida meleagris (helmeted guineafowl): 110393223
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Entry
110393223 CDS
T06015
Symbol
VPS41
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog isoform X1
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel04140
Autophagy - animal
nmel04148
Efferocytosis
nmel05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
110393223 (VPS41)
04148 Efferocytosis
110393223 (VPS41)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110393223 (VPS41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
nmel04131
]
110393223 (VPS41)
Membrane trafficking [BR:
nmel04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
110393223 (VPS41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40_CDC20-Fz
WD40_Prp19
zf_RING_Vps8_fungal
Beta-prop_EML_2
zf_RING_Vps8
Vps39_1
Beta-prop_HPS5
TPR_PEP5_VPS11
ANAPC4_WD40
zf-RING_5
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Frtz
zf-RING_11
zf-rbx1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
110393223
NCBI-ProteinID:
XP_021241520
LinkDB
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Position
2:complement(49422965..49529156)
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AA seq
854 aa
AA seq
DB search
MAEAAEKETRSNEESTDESEEDESEEEPKLKYERLSNGVTEILQKDAASCMTVHEKFLAL
GTHYGKVYLLDVQGNITRKFDVSPVKINQISLDESGEHMGVCSEDGKVQVFGLYSAEEFH
ETFDCPIKIVAVHPHFVRSHFKQFVTGGKKLLLYERGWMNRWKPSVLHEGEGNIRNVKWR
GHLIAWANNMGVKILDMISKQRITNVPRDDISLRPDMYPCSLCWKDNLTLIIGWGNSVKI
CSVKERHASEMRDLPNRYVEIVFQFDTEFYISGLAPLCDQLVILSYVKEISDKTEVECCA
RPRLDIVQPLPESCEEISSDALTVRGFQENECRDYHLEYSEGESLFYIISPRDVVVAKER
DQDDHIDWLLEKKKYEEALMAAEISQKTIKKHKILDIGLAYINHLVEKGEHDLAARKCQK
ILGKNTELWEFEVYKFKEIGQLKAISRYLPRRDPVLKPLIYEMVLHEFLESDYEGFATLI
KEWPGDLYNNTIIVQAVVDHLKKDPQNRTLLRTLAELYTYDQRYGRALEIYLTLRHKDVF
QLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKISIDRVVEELENRPELQHVYLHK
LFKRDHHKGQRYHEKQISLYAEYDRPNLLPFLRDSTHCPLEKALEICQQRNFVEETVYLL
SRMGNSRSALKMIMEELQDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGTH
VDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKILVADSLSLLKKMHRTQM
KGVLVDEENICESCLSPVLPSDASKSFNVVVFHCRHMFHKECLPVSNTVSSVQFCNICSA
KHRGPGSAILEMKK
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagccgcggagaaggaaaccaggtctaatgaggaatcaacagatgaatctgag
gaagatgagagcgaagaggagcccaagctgaagtatgaacgactttctaacggagtgaca
gaaattctgcagaaggatgcagctagttgcatgacagtgcatgaaaagtttttggcactg
ggaacacattatggcaaagtttatttacttgatgtccaggggaacatcacacggaagttt
gatgttagcccagtgaagataaatcagatcagtctggatgaaagtggagaacacatgggt
gtttgttcagaagacggcaaggtgcaagtgtttggattgtattcagcagaagaatttcat
gaaacattcgactgtcctattaaaattgttgctgttcatcctcattttgtaagatcccac
ttcaagcagtttgtaacgggaggaaaaaagttactgctctatgagagaggctggatgaat
agatggaagccttccgttttacacgaaggggaaggaaacataagaaatgtaaaatggaga
ggacacttaattgcttgggccaataacatgggcgtgaagatacttgacatgatctccaag
caaagaattaccaatgtgcctcgagatgacataagccttcgcccagacatgtatccctgt
agcctttgctggaaggataatttaacactgattattggctggggaaattcagtaaagatt
tgctcagtaaaggagcggcatgccagtgaaatgcgtgaccttccaaaccgctatgtggaa
atagttttccaatttgatacggagttctatatcagtgggcttgcacctctctgtgaccaa
cttgttatactttcatacgtaaaggagatttcagataagacggaggtggagtgttgcgcc
aggcccagactggacattgtacaacccctgcctgagtcttgcgaggagatctcttctgat
gcgctaacagtacgaggatttcaggagaacgaatgtagagattaccatttagagtattcg
gaaggtgaatcactgttttatatcatcagcccaagagacgtggtcgtagctaaagaacgg
gaccaagatgaccacattgactggcttcttgaaaagaagaaatatgaagaagctttgatg
gcagctgagatcagtcagaaaaccataaaaaagcacaagattttggacataggcttagcc
tatataaatcacctagtggagaaaggagagcatgacctggctgctcgaaagtgccagaaa
attcttggcaaaaacacagaactctgggaatttgaagtttacaagtttaaagaaataggt
caacttaaggcaattagtcgttacttgcccagacgggatccagttttgaaacctcttatc
tatgagatggtcctgcatgagtttttggagagtgactatgaggggtttgcaaccctgata
aaagagtggcctggagatctctacaacaacacaatcatagttcaagctgtagtagatcac
ctgaagaaagatccacaaaacaggacgttgctaagaacacttgcagaactgtatacgtat
gatcagcgctatggcagagccctagaaatttacctaactctgaggcacaaagacgtcttc
cagttgatccacaagcacaatcttttcagttccatcaaagataaaattgttctgctcatg
gattttgattcagagaaagcagtagacatgcttttggataatgaagataaaatttctatt
gacagagttgttgaagagctagaaaacagacctgaactacagcatgtgtatttgcacaag
cttttcaaaagagaccaccataaaggacaacggtatcatgaaaaacagatcagtctttat
gctgaatatgatcgtccaaatctactaccatttctgagagacagcacgcactgtccacta
gagaaggctctagagatctgccagcagagaaactttgtagaagagacagtttatcttctg
agtagaatgggtaatagccgcagtgccttgaagatgataatggaagaactgcaagatgta
gataaggctattgaatttgccaaggaacaagatgatggagaactttgggaagacctcatt
ttatattctattgacaaaccaccttttattactggtttgttgaacaatattggaacgcat
gttgatcccattcttttgattcatcgtattaaggaaggcatggagattcctaatttgaga
gactcgctagtgaaaattcttcaggactacaacttgcagatcttgctgcgggaaggctgc
aagaagattcttgttgctgactctctttctttgttgaagaaaatgcatcgaactcaaatg
aagggcgttctagtagatgaggaaaatatctgtgaatcatgcctgtctccagtacttcct
tcagatgcatccaagtccttcaacgtggtagtgttccactgcagacacatgtttcacaaa
gaatgtctcccagtatctaacacagtgtcttctgtccagttctgcaacatatgcagtgcc
aaacaccgaggaccaggaagtgcaatactggagatgaagaaatag
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