Numida meleagris (helmeted guineafowl): 110393306
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Entry
110393306 CDS
T06015
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
110393306 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmel03032
]
110393306 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
nmel03400
]
110393306 (TOPBP1)
DNA replication proteins [BR:
nmel03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
110393306 (TOPBP1)
DNA repair and recombination proteins [BR:
nmel03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
110393306 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
110393306
NCBI-ProteinID:
XP_021241700
LinkDB
All DBs
Position
2:complement(42677384..42701024)
Genome browser
AA seq
1518 aa
AA seq
DB search
MKGSKELFLVKFVKSSGSSEYFLKALESIKEFQSEEHLQILEEAAALSIKENDKSLYICD
PFTGIVFDHLKKLGCRIVGPQVVLYCMQSQRCVPRAEYPVYNMTMADVTISCTTLEKDVR
EEVHKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAASLKKPILLPSWVKTLWDKSQQ
SMMRYTDVNMEDYACPVFLGCTICVTGLSSSDRKEVQRLTTEHGGRYSGQLKMNECTHLI
VQEPKGQKYECAKKWNVHCVPVQWFSDSIEKGFCQDETMYKIETGSKLSNTPSTSTPTSH
ASKLDTHSLSDVSCISNVNLSNVNETACSSAMSSRLDPPPDELENLDISSLQAPEDLLDG
CRVYLCGFSGRKLDKMRRLINCGGGVRFNQLNEDVTHIILGGENSDELKHFLDRTLHRPH
IVTAKWLLESFNKGYLCPVEQYIPQNYQLLVNTILDQPDAKLVLPKNNSILKKKAMTIVK
HQKAAEDDFLLQYVNNDSTLAEKLTSGSLNDVTHVTVQEEDHSSVCNGSLGTPSVLDEGL
FARKRFLLLGFGEEDESCIADLIKEHAGKILPLQSKAIADYAVVPLLGCSVKPTVGDVVT
NTWLVTCVEQQLLLDPQANPLFTPVLVMEGVTPLVDCVLSFSQFTGAERDSLVYLAGLLG
ARVQEFFVRKANAKKGMFASTHLVVKEPDGSKYEAAKKWNLPAVTVAWLLQSARTGKRAD
ESKFLVENADAEDESSISKLNKTPSSAAFPDSPERPTYLHEAGKKTAVTPLDINRFQSKA
FQAVISHHIGKATTPPAQGRLLQKEPSLHLDTPSKFLSKDKLFKPSFDVKDALAALETPG
GLRQKNRKLSTPLSEVIGRNLKLALANSTRNTEALTASPQLKAAQLEAEEEPKPLADVVI
CVSKKLSKRQSELNAIAASLGADYRWCFDETVTHFIYKGGQNDSNKEYRSVKERGIHIVS
EHWLLECAQEYKRLPESLFPHTYNPKMSLDISAVQDCRPSSSSKLPPTGKPAEESEIIPV
DEDDAEDDLTTDQIKETIGTGEEHIGISESKGVLTQALEMRESFQRQLQEIMSATSVVKP
QGQRGSLSRNSFDSSPATPDSARSVRNGRSRVLEALRQSRQALTDINTEPSQSEQIIWDD
PTAREERARLVSNFQWPNSPSQYTEQAQSNVSRNMDESTFKGSIADSEIAGIVVPEAGDG
DTIGDLKNPVSRDPETPIKDHLIPTPQAPSIAFPLANPPVAPQPKEKAVTEDEKVDEEPE
KCRKFQLSSLNPQERFDYCHLIEELGGILLEKQCFDPDCTHIVVGHPLRNEKFLASMAAG
KWVLHRSYLEACRGAGCFVQEEDYEWGSDSILNVLSGINVNQKKLALAAMRWRKKIHKGR
QETGITEGAFSGWKVILNVDHTKEAGFRRLLQSGGAKVFSGHSVSFFKEATHLFADFSKL
KPDDTRVNVAEAAAQGVNCLKPEYIADFLIQDPPPPMESYCLPEAEPCFQNSKELGTGLS
QKRKAPGEMSRVKRSRMH
NT seq
4557 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggcagcaaggagctgttcttggtgaaattcgtaaaatcttctgggagctcggag
tatttcctgaaagccctggagtctataaaagaatttcagtcagaagaacatctccagatt
cttgaagaagcagcagcactcagtataaaagaaaatgataaatccctttacatttgtgat
cctttcacggggattgttttcgatcatctcaaaaagcttggttgtagaattgttggaccg
caggtagtcctgtactgcatgcagtcccagagatgtgtcccgagagccgagtatcctgta
tataacatgaccatggctgatgtaacgatatcctgtaccaccttagaaaaagatgttcgg
gaagaagttcataaatacgtgcagatgatgggtggacgtgtgtacagagacctcaatgtg
tcagtaactcatcttatagcaggagaagtgggcagcaagaaatacttagtagctgcttct
ctgaaaaaacctattttgcttccttcttgggttaagacactatgggataaatctcagcaa
agcatgatgagatacactgatgttaacatggaagactatgcttgtcctgtgtttcttggc
tgtacaatttgcgtaactggcttaagtagttcagacaggaaagaagtccagcgcctcacg
actgaacatggtgggcggtattcagggcaactcaagatgaatgaatgtactcacctcata
gttcaagaaccaaaaggtcagaagtatgaatgtgccaaaaaatggaatgtccactgcgtg
cctgtgcagtggttttctgacagcattgagaaaggcttctgtcaagatgagacaatgtat
aaaatagagactggatcaaaactaagtaatacacccagtacctcaacacccacaagtcac
gccagcaagcttgacactcattccctttcggacgtcagctgcatttccaatgtcaatttg
agtaacgtcaatgaaactgcttgtagttctgctatgagcagcagactggatcctcctcct
gatgagttggaaaacttggacataagttctcttcaagcccccgaagatttattagatggc
tgtcgagtctatctttgtggcttcagtggcaggaagctggacaagatgagaaggcttatt
aactgtggtggtggtgttcggtttaatcaacttaatgaagatgttacccacatcattctg
gggggggaaaacagtgacgagctgaaacactttttggacaggacacttcacaggcctcat
atagtgacagcaaaatggttactggagtcatttaataaaggctatctctgtccagtggag
caatatatccctcaaaactaccagctgttagtgaatacaattttggaccaacctgatgca
aagttagttcttcccaaaaacaatagcatcttgaagaagaaagccatgactattgtaaag
caccagaaagctgcagaagacgacttcctcttgcagtatgtcaataatgattctacatta
gctgagaaactaacatctggtagcctcaatgatgttactcatgtgactgttcaagaagag
gatcattcttctgtctgtaatggttctttgggaacgccttctgtgctggatgaaggttta
tttgccaggaagagatttcttcttttgggttttggagaagaggatgagtcctgcattgcc
gatctgattaaggagcatgctgggaaaattctgccgctgcaaagcaaagccattgcagac
tatgctgtggtacctttattggggtgctctgtgaagccaactgttggtgatgttgtcaca
aatacatggctggtaacgtgtgtggaacagcagctcctcttagatccccaagccaatcca
cttttcacaccagtcctagtaatggaaggagttactcctttggtggactgtgttctttct
tttagccaatttactggtgcagagagagactccctggtttatctggcaggacttctagga
gcaagagtccaagaattctttgtgcgaaaggccaatgcaaaaaagggaatgtttgcaagt
acccatcttgtggtgaaagagccggatggttccaagtatgaggctgcaaagaagtggaat
ttgcctgcagtcactgtagcttggcttttgcagtctgcaaggacgggaaagagagcagat
gagagcaagtttttggttgaaaatgcagatgctgaagatgagagttccatttctaagctt
aacaagacaccatcatctgctgcatttcctgattctccagaacgacctacttatctccac
gaagctggaaaaaaaacagccgtcacccctcttgatatcaacaggtttcagagtaaagct
ttccaagctgtcatttctcatcatattgggaaggcaactactcctcctgctcaaggaaga
ctgctacaaaaagaaccgtctttacaccttgacacaccatcaaaatttctttccaaagac
aagttattcaagccttcttttgatgtaaaggatgctctggcagctttggaaactccagga
ggtcttcgtcaaaagaacaggaagctgagcacacctctctctgaagtcattggcagaaac
ctgaaattggcactggcgaacagcactcggaacacagaagctcttactgccagccctcag
ctgaaggctgcacagctagaagcggaagaagagcccaagcctctagctgatgttgttatc
tgtgttagtaagaaacttagtaagaggcaaagtgaactgaatgctattgcagcttctctt
ggagcagactacagatggtgttttgatgaaacagtaacgcacttcatctacaagggagga
caaaacgacagcaacaaggaatatcgatctgttaaagaacgaggaatacatattgtttca
gaacactggcttttagagtgtgcccaagaatataaacggctccctgaatctctctttcct
cacacttacaatcccaaaatgagcctggacatcagtgcagtgcaagattgcaggccctcc
tcttccagtaagcttccacccactggaaaacctgcagaagaaagtgagattattccggtg
gatgaagatgatgctgaagatgatttaactactgaccaaataaaggaaacgattgggaca
ggggaggagcacattggaataagtgaatccaagggagttttaacccaggcactggaaatg
agggagagcttccagaggcagctgcaggagatcatgtctgccacatcagtagtgaaaccg
caaggacaaagaggatccctttcaaggaacagttttgatagttctccagccactcctgat
agcgcgcggtctgtgcgaaatggccgcagtagggtcttggaagctctaaggcagtctcgt
caagctctcacagatatcaacacggagccatcccagagtgagcagatcatctgggatgat
cctacagcaagggaagagagagcgagacttgtcagcaactttcagtggcctaacagtcct
tcccagtacacagagcaagctcagagtaacgtcagtaggaacatggatgagtctaccttc
aaaggatccatagctgattcagagattgctggtatagttgttcctgaggctggggatgga
gatacaattggagatctgaagaatcctgtatctagagatcccgaaacacccatcaaagat
cacttgatccccactccgcaggctcccagcattgcattcccactggctaaccctcctgtg
gcaccacagcccaaagaaaaggctgttacagaagatgagaaggttgatgaagaaccagaa
aaatgccgtaaatttcagctgtcttctcttaatcctcaggaaagatttgactactgccat
ctgattgaggaattaggtggaatactacttgagaaacagtgctttgatccagattgcaca
cacattgttgtgggacatcctcttcgaaatgagaaattcctggcctcgatggcagctgga
aagtgggtgcttcatcgttcctacctggaggcatgtagaggagctggctgctttgttcag
gaagaagattatgagtggggaagcgattccatacttaatgttttgtctggaatcaatgta
aaccagaagaagctagcactcgcagccatgaggtggaggaaaaaaattcataaaggaagg
caagaaactgggattactgagggagccttcagtggctggaaagtgatcctgaatgttgat
cacaccaaggaagcaggattccgacgccttcttcagtcaggaggagccaaagtattttct
ggtcattctgtgtctttcttcaaagaagcgactcatctctttgctgacttcagtaagctg
aagccagatgacaccagggtgaatgtagcagaggcggcagcccagggagtgaactgcttg
aagccagagtacattgcggacttcctcatccaggatcctcctcccccaatggagtcttac
tgcctgccagaagctgagccttgcttccagaacagcaaagaacttgggactggattatcc
cagaaaagaaaagcaccgggagaaatgagcagagtcaagcgatccagaatgcactga
DBGET
integrated database retrieval system
