KEGG   Numida meleagris (helmeted guineafowl): 110393616
Entry
110393616         CDS       T06015                                 
Symbol
WDR48
Name
(RefSeq) WD repeat-containing protein 48
  KO
K15361  WD repeat-containing protein 48
Organism
nmel  Numida meleagris (helmeted guineafowl)
Pathway
nmel03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:nmel00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    110393616 (WDR48)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nmel03400]
    110393616 (WDR48)
DNA repair and recombination proteins [BR:nmel03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     110393616 (WDR48)
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WDR55 Beta-prop_EML_2 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_IFT122_1st Beta-prop_SPT8 NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_DCAF12 ANAPC4_WD40 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 Beta-prop_IP5PC_F WDR54 WD_LRWD1 Beta-prop_Vps41 WD40_RFWD3 Beta-prop_HPS5 RAWUL WD40_like Nucleoporin_N Tfb2_C Beta-prop_VPS8
Other DBs
NCBI-GeneID: 110393616
NCBI-ProteinID: XP_021242324
LinkDB
Position
2:complement(4512643..4538244)
AA seq 678 aa
MAAHHRQNTAGRRKVQVSYVIRDEVEKYNRNGVNALQLDPALNRLFTAGRDSIIRIWSVN
QHKQDPYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAHKGFCMSTLRTHKDYV
KALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSIYSLAMNQMG
TVIVSGSTEKVLRVWDPRTCAKLMKLKGHTDNVKALLLNRDGTQCLSGSSDGTIRLWSLG
QQRCIATYRVHDEGVWALQVNEAFTHVYSGGRDRKIYCTDLRNPDIRVLICEEKAPVLKM
ELDRSADPPPAIWVATTKSSVNKWTLKGIHNFRASGDYDNDCTNPIPPLCTQPDQVIKGG
ASIIQCHILNDKRHILTKDTNNNVAYWDVLKACKVEDLGKVDFEEEIKKRFKMVYVPNWF
SVDLKTGMLTITLDESDCFAAWVSAKDAGFSSPDGSDPKLNLGGLLLQALLEYWPRTHIN
PMDEEENEINHAVNGEQENRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLLCRDSGGETES
MLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASDMLQVRKVMEH
VYEKIINLDNESQTTSSSNNEKAGEQEKEEDIAVLAEEKIELLCQDQVLDPNMDLRTVKH
FIWKSGGDLTLHYRQKST
NT seq 2037 nt   +upstreamnt  +downstreamnt
atggcggcgcatcaccggcagaacacggcggggcggcggaaagtgcaggtctcctatgtg
attagagatgaggtggagaagtataaccgaaatggggtaaatgcacttcagctggatcca
gcattaaatagacttttcacagcaggccgagactctattataaggatatggagtgtcaat
cagcacaagcaagacccttatattgcatcaatggaacatcacacggattgggtaaacgat
attgtactctgctgcaatggtaaaacattgatatctgcttcttcagatactactgttaaa
gtgtggaacgcacataagggattttgcatgtcaacactaaggacacataaggattatgtg
aaagccttagcatatgcaaaagataaagaactggtagcatctgccgggctggacagacag
atattcctctgggatgtaaatactctcacagcactgactgcctcaaataacactgtcaca
acttcttccctgagtgggaacaaagattctatctacagccttgcaatgaatcagatggga
acagttattgtatcagggtccactgagaaggttctcagggtgtgggatccaagaacttgt
gcaaaactaatgaaactcaaggggcacacagacaacgtaaaagctttgcttttgaacaga
gatggtacccagtgtctttcaggcagttctgatgggactattcgtctgtggtcccttggg
cagcagagatgtatagccacatatcgagtccatgatgaaggtgtttgggctctgcaggtc
aatgaagcattcactcatgtttattcaggaggaagagacaggaagatttattgtacagat
ttacggaatcctgatatccgtgtgcttatctgtgaagaaaaggcaccagttcttaagatg
gaacttgatagatcagctgatcctcctccagcaatctgggttgcaacaactaagtcctct
gtgaataaatggactttgaagggaattcataattttagagcatctggggactatgataac
gattgtaccaatcctataccacccctgtgtacgcagcctgaccaagttataaaagggggt
gctagtatcattcagtgccacattcttaatgacaagagacacatattaaccaaagacaca
aataataatgtggcatactgggatgtcttaaaggcatgtaaagttgaagaccttgggaaa
gtagattttgaagaggaaattaagaagagatttaaaatggtgtatgtgccaaactggttc
tcggtagacttgaaaactgggatgctgacaattactctggatgaaagtgactgctttgca
gcctgggtttcagcgaaagatgctggttttagcagtccagatggttctgatccaaaattg
aaccttggagggcttctattgcaagcactgctggagtattggcctagaacacacatcaat
ccaatggatgaagaagaaaatgaaataaatcatgcagtgaatggtgagcaggagaacaga
gtccagaaaggaaatggatattttcaagtaccaccacatacaccagttatatttggtgag
gctggaggacgcactttgttcaggttgttatgtcgggattcaggtggtgaaacggagtca
atgcttctgaatgagaccgtgccacaatgggtgattgacatcactgtggataaaaatatg
cccaaattcaataagattcccttctacctccaacctcattcgtcttcaggggcaaaaact
ctaaaaaaagaccgactgtcagcaagtgatatgcttcaggtgagaaaagtgatggagcac
gtgtatgagaaaatcatcaacttggataatgagtctcagaccactagctcttccaataat
gagaaagcaggagaacaagaaaaagaggaggacattgctgtgcttgcagaggagaaaatt
gaacttctttgccaggaccaggttttggacccgaatatggaccttcgaactgtaaagcac
ttcatctggaagagtggtggtgatctgacgcttcattatcgccagaaatcaacgtga

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