Numida meleagris (helmeted guineafowl): 110394756
Help
Entry
110394756 CDS
T06015
Symbol
TRPA1
Name
(RefSeq) transient receptor potential cation channel subfamily A member 1 isoform X1
KO
K04984
transient receptor potential cation channel subfamily A member 1
Organism
nmel
Numida meleagris (helmeted guineafowl)
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
nmel04040
]
110394756 (TRPA1)
Ion channels [BR:
nmel04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
110394756 (TRPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ion_trans
ANK_LRRK2
PKD_channel
DUF5685
Motif
Other DBs
NCBI-GeneID:
110394756
NCBI-ProteinID:
XP_021244409
LinkDB
All DBs
Position
2:complement(115973190..116008526)
Genome browser
AA seq
1126 aa
AA seq
DB search
MKRSLWRLCQSREKAAVSSAYQGVVCEADAASVASQDVFKVISDGSACRLRSFIKKNRSG
LTKVDELNATPLHHAAEGGQIELMQLIIDDSSSEVLNVMDSSGNTPLHWATRKNQVESVS
LLLSRGANPNILNSNMMAPLHMAIQYLHNEIVKILVQHSSTDVNLEGEAGNTPIIVACYK
DNPEALTLLIENGGKICKPNKTGGMPIHAAAFSGAKTCMEILLKKGEELGHSAKTHINFT
NNGKCSPLHLAVQSGDLEMIKMCIEFGAQIDLKQNEKCTALHFAATQGATEIVKLMMSSY
AGEESIIDAVDGNKESLLHRTALFDHYELAEYLISMGANIDSVDAEGRSPLLLATSCASW
KIVNLLLSKGANVSLKDHLGRNFLHLTVLQPGGLQHLNEKFLQMEHIKNLVVDEDNEGCT
PLHYACRQGVALSVNNLLSLNVSIYSKSRDKKSPLHFAASYGRINTCQRLIRDMKDTRLL
NEGDKKGMTPLHLAAQNGHEKVVQFLLKRGALFLCDYKGWTALHHAAFGGYTRTMQIILD
TNVKCTDRVDEEGNTALHLAAKEGHAKAVRLLLDYGAKILLNKAVASFFHEAIHNRRKDV
VSAVILHKRWEEAVLTFSHYSSANKCPLLEMIEYLPDSFKLVLDNCIIESSEEKTSRDFY
IEYNFRYLQCPLTLNKKLKEGEDIFYEPLAILNAMVRHNRMELLSHPVCKEYLLMKWMAY
GFRAHLMNLGIYSLGLIPLTLLVTHIQPGRPLNGTEFYEARPLEYEDSYFTRVCMCLVLI
MSLLGICKEIFQLIQQKLKYLLDYSNLLDWTIYSTSIIFVSSLFINTPAHLQWECGAIAV
YLSWMNFLLYLQRFENYGIYVVMFWEILRTLIRIAVVFFFLILAFGLSFFVLLGSQQTYS
TPLLSVMKTFAMMLGDINYHDAFLDPLLSSELPYPFLSYTVLIIFTLLIPILLMNLLIGL
AVGDIAEVQKYAALKRIAMQVNLHTNLEKKLPFWFLSRVDQESITVYPNRPRYCGFMSVF
QYCFGCEDSTTDAQSTDTTLELEVLKQKYRLKDMSTLLEKQHDLIKLIIQKMEIVSEAED
EDSNDLFQHKFRKRQLEHRNSKWDTVLKAVKSNVPNPSTEKSNSFL
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgctctctgtggcggctgtgccagtcgcgggagaaggcggccgtgtccagcgcc
taccagggcgtcgtctgcgaggccgatgccgcctccgtcgcctcgcaggatgtcttcaag
gtgatttcagatggaagcgcctgtaggctgcgaagcttcattaagaagaatcgttctgga
cttaccaaagtggatgaattaaatgcaaccccactgcatcatgctgctgaaggaggccaa
atagaattgatgcagttgattatagatgattcttcctctgaagtattaaatgtgatggat
tcttctggaaataccccactgcactgggctacaaggaaaaaccaggttgaaagtgttagt
ttacttctcagtagaggagccaacccaaacattctcaactccaatatgatggcacctttg
catatggctatacagtacctgcataatgaaattgtcaagattttggtccagcatagcagt
acagatgttaatttggaaggtgaagcaggaaacacacctataatagtagcatgttataag
gacaatcctgaagcactaacactcctgattgaaaacggaggaaaaatatgtaaaccaaac
aaaacaggaggcatgcctatccatgctgctgcattttcgggtgcaaaaacatgtatggaa
atccttttaaaaaaaggtgaagaactgggtcactctgctaaaactcacattaattttacc
aataatgggaagtgcagtccacttcatttggcagttcaaagcggggacttggaaatgatt
aaaatgtgcattgaatttggagcccaaattgatctaaaacagaatgaaaaatgtactgcg
cttcattttgctgccactcaaggagcaactgagattgtaaaattaatgatgtcatcctat
gctggtgaggagtccattattgatgctgtagatgggaataaggaatcattgcttcacagg
acagccttgtttgatcattatgaactggcagagtatttgatttctatgggagcaaatatt
gatagtgttgatgcagaaggtcgatctccgcttctgttggccacttcttgtgcatcatgg
aaaattgtgaatttactgctctcaaaaggagcaaatgtatcgttaaaagatcatcttggt
cggaatttcttgcacttgacggtattacagcctggaggattacaacatctgaatgagaaa
tttctgcagatggaacatattaaaaatcttgtggtggatgaagataacgaaggatgcact
ccactgcattatgcatgcagacaaggtgtggccctttctgtaaataatttactcagcctc
aatgtttccatttattccaagagcagagacaagaagtcaccattacactttgctgccagc
tatggccgcatcaatacatgtcagcgacttataagagatatgaaggacacaagacttttg
aatgaaggtgataagaagggaatgactccccttcatttggcagcccagaacggtcatgag
aaggtagttcagtttcttctgaaaagaggggccctttttctctgtgactataaaggctgg
acagccctgcatcatgctgccttcggaggatacactcgcacaatgcagataatattggat
actaatgtgaagtgtactgacagggtggatgaagaagggaatacagctttgcacctagct
gcaaaagaaggacatgcaaaagcagtaaggttactcctcgactacggtgcaaaaattctg
ttgaacaaagcagtagcttcttttttccatgaagcaatacacaacaggaggaaggatgta
gtgtcagctgttatattgcacaaaagatgggaagaagctgttctgacattctctcactat
tccagtgccaataaatgtcctttgctggaaatgattgagtatcttcctgattcatttaaa
ctggttttggacaactgcataattgagtcttcagaggaaaagacaagtcgagacttttat
attgaatacaacttcagatatcttcagtgtcccctgacccttaacaaaaaattaaaggaa
ggtgaagatattttctatgaaccactcgccattttaaatgccatggtgcgccacaatcgc
atggagctccttagtcatcctgtgtgcaaagaatatttgctaatgaagtggatggcctac
ggttttcgagcgcatctaatgaatttaggcatatattcacttggtctgataccgttgact
cttctggtcacccacatacagccaggaagacctttgaatggaacagaattctatgaagca
agaccattagagtatgaggattcatacttcacaagagtgtgtatgtgtttagttttaatt
atgagtttactgggaatttgcaaagaaatatttcagctcattcagcagaaattgaaatat
ttgttggattactccaatctactggactggacaatttatagtacaagcataatttttgtg
tcttctttatttattaatacaccagctcatttgcagtgggaatgtggagcaattgctgtg
tacttgtcttggatgaacttcttgctttaccttcagcgatttgaaaattatggcatttat
gttgtgatgttctgggaaattctgaggactttgattcggattgctgtcgttttctttttc
ctgatactggcctttggactgagtttctttgtccttttgggttcacagcaaacgtacagc
acaccactgctttctgtaatgaagacatttgcaatgatgctgggagacataaattatcat
gatgcattccttgatccattactgagcagtgaattgccatatccgttcctgagttacaca
gttctgattatatttactttgcttattccaatccttcttatgaacttgctaattggtttg
gctgttggggacatagctgaagtgcaaaaatatgctgctctcaaaaggattgcaatgcag
gtcaatcttcacacaaacttagagaagaagctgccattttggttcctaagtcgagtggac
caggaatcaatcacagtctatcctaacagaccaagatactgtggatttatgagtgtgttc
cagtattgctttgggtgtgaggactctaccacagatgcacagagcactgatacaacatta
gagttggaagttctgaagcagaaatacaggctcaaagatatgtcaacgctgttggaaaag
caacatgacctcattaaactgattatacaaaaaatggagatagtgtcagaggctgaggat
gaagacagcaatgatttatttcagcacaagtttaggaaaaggcagttagaacataggaat
agtaaatgggacacagtgttaaaagctgttaaatcaaatgtgcctaacccaagcacggaa
aagagcaacagcttcttgtag
DBGET
integrated database retrieval system
