Numida meleagris (helmeted guineafowl): 110395317
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Entry
110395317 CDS
T06015
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1 isoform X1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
nmel
Numida meleagris (helmeted guineafowl)
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nmel03041
]
110395317 (DDX1)
03016 Transfer RNA biogenesis [BR:
nmel03016
]
110395317 (DDX1)
Enzymes [BR:
nmel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110395317 (DDX1)
Spliceosome [BR:
nmel03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
110395317 (DDX1)
Transfer RNA biogenesis [BR:
nmel03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
110395317 (DDX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
110395317
NCBI-ProteinID:
XP_021245176
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All DBs
Position
3:99773203..99794836
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AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQMEGKKGKATIKTGGAVLNKWQMNPYDRGSAFAIGSDGLCCQSREVKEWH
GCRATRGVTKGKYYYEVSCHDQGLCRVGWSTMQASLDLGTDKFGFGFGGTGKKSHNKQFD
SYGEEFTMHDTIGCYLDIDKGQIKFSKNGKDLGLAFEFPPHIRNQALFAACVLKNAELKF
NFGEEDFKFPPKDGYIGLCKAPDGNVVKSQHTGNAQVVQTQNLPNAPKALIVEPSRELAE
QTLNNVKQFKKYIDNPKLRELLIIGGVAARDQLSVLEQGVDIVVGTPGRLDDLVSTGKLN
LSQVRFLVLDEADGLLLQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPETVHHVVVLVNPKTDKLWERLGKNHIRTDEVHAKDNTRPGAN
TPEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQQGGGPDRKGHQF
SCVCLHGDRKPQERKQNLERFKRGDVRFLICTDVAARGIDIHGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAKEKEKVWYHVCSSRGKGCYNTRLKEEGGCTIWYNEMQLLG
EIEEHLNCTISQVEPDIKVPVDDFDGKVTYGQKRALGGGLYKGHVDILAPTVQELAALEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttctcggaaatgggtgttatgcctgaaatagctcaagcggtggaggagatg
gattggcttcttcctacagatattcaagcagaatctatcccattgattctgggaggtggt
gatgtacttatggctgcagaaacggggagtggaaaaactggtgctttcagcattccagtt
atccagattgtatatgaaacgctgaaggaccaaatggaagggaagaaagggaaagcaact
attaaaactggtggggcagtgctcaataaatggcagatgaacccgtatgacagaggatca
gcttttgcgattggatcagatggtctgtgttgtcaaagcagagaagtaaaagaatggcat
ggatgcagagcaactagaggtgtgactaaaggaaaatactactacgaagtgtcttgtcat
gaccaaggcttgtgcagagttggttggtcaactatgcaggcttcactagatttgggtact
gataaatttggctttggatttggtggaactggtaagaagtctcacaacaagcaatttgac
agctatggtgaggaattcactatgcacgatacgattggatgttatctagacatagataaa
ggacaaataaagttttccaaaaacgggaaggaccttggccttgcatttgaattcccaccg
catataaggaaccaggcactctttgcagcttgtgtactgaagaatgctgaattgaaattt
aattttggtgaagaagacttcaagtttccaccaaaagatggctatattggtctttgcaaa
gctcctgatggtaatgttgtaaaatcacaacatacaggaaatgcacaagtggttcaaacg
cagaaccttccaaatgctccaaaagcgttgattgtagaaccatcaagagagctggcagaa
caaactttgaacaatgtgaagcagttcaaaaaatacattgataatcccaaattgagggag
ctgttgattattggtggggttgctgcaagggatcaactttctgtgctggaacaaggagtg
gatattgttgttggaactcctggaagactggatgacctggtctcaacaggaaagcttaat
ttatctcaagttagattcctcgttctggatgaagctgatggccttcttctccaaggttat
tcagacttcataaacaggatccacagccaaattccacagataacttcagatggcaagaga
cttcaggtgattgtgtgctctgcaacactacattcttttgatgtgaaaaaactgtctgaa
aagatcatgcattttcctacctgggttgatttgaaaggagaagattctgtccctgaaact
gtacaccatgtagttgtgcttgtaaatcccaaaactgacaaactttgggaaaggcttggc
aagaatcatatcagaactgatgaagtgcatgcaaaagacaatacccgacctggtgcaaac
actccagaaatgtggtctgaagctatcaaaattctaaaaggagaatacactgttcgggca
atcaaggaacacaagatggaccaggccattattttctgcaggacaaaaatagattgtgat
aatatggagcaatacttcatccaacagggcggaggccctgataggaagggacatcagttc
tcatgtgtctgtctgcatggtgacagaaaacctcaagaaagaaagcagaacctggaaaga
tttaagagaggagatgtccgtttcttgatctgcacagatgttgcagctagaggaattgat
attcatggtgttccctatgttatcaacgtcacactccctgatgaaaaacagaactatgtt
catcgaattggaagagtaggcagagctgaaaggatgggtctggcgatttcccttgtggca
aaagagaaagaaaaggtttggtatcatgtatgcagtagtcgtggaaaggggtgttacaat
actagactcaaggaagaaggaggttgtaccatatggtacaatgaaatgcagttgctggga
gagattgaagagcacttaaactgcactatttcccaagttgaaccagacataaaagtacca
gtagatgactttgatgggaaagttacatacggacagaaaagagcccttggtggtggactc
tacaaaggccatgtggatattctggcacctacagttcaagagttggctgcccttgaaaag
gaggctcagacatctttcttgcatcttggctatcttcctaaccagctgttcagaacattc
tga
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