Numida meleagris (helmeted guineafowl): 110395340
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Entry
110395340 CDS
T06015
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
nmel
Numida meleagris (helmeted guineafowl)
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nmel03000
]
110395340 (PRDM1)
Transcription factors [BR:
nmel03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
110395340 (PRDM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
Zf-C2H2_ZNF451_C
C2CH-3rd_BIRD-IDD
zf-C2H2_6
zf-C2H2_jaz
zf-met
zf-C2HE
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
110395340
NCBI-ProteinID:
XP_021245247
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All DBs
Position
3:complement(68260590..68358889)
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AA seq
1046 aa
AA seq
DB search
MLLLLFCTFPTRKARGGLAAPQGAPPELRASQPLFSPLRVPSDSRQERHPLGGAKAKAKR
GLKPSGGGGSHVTAGKRPDRAGQRGAGGCAPHGGQGRAGPGRAEQAAPPAPPLRSPRTPQ
AGPGAPQRCPRGRGPPLAAAHWGGRLSYCAVLIFIPSAPPLLSLPSSFLPLVPAPPPLCA
RRDEAAAGSGRFKPPDGLKDAPERNHLADLVSSLEAPLDVEQILRLQAPEDGLQKAATQC
SSDAVSFKNLVKGREWTMKMDMEDADMTLWTEADFEEKCTYIVNDHPWDPSADGGTLTQA
EASLPRNLTFKYASNCKEVTGVISKEYIPKGTRFGPLVGEIYTSDTVPKNANRKYFWRIY
SSGELHHFIDGFNEDKSNWMRYVNPGYSVQEQNLAACQNGMNIYFYTIKPIPANQELLVW
YCRDFAERLHYPSSRELTMMNLTQTHVNPKQHSADKDELYQKSVPKKEHSVKEILKMESS
PPKGKDFFQTNISPVTPENDLDDLHKNYSPERCFFPRVVYPIRPHIPEDYLKASLAYGMD
RPSYITHSPIQSSTTPSPSGRSSPDQSLKSSSPHSSPGVTVSPLAPTSQEHRESYPYLNG
SYGSEGLGSYPGYAPPSHLPSAFLPSYNPHYPKFLLPPFNMSCNNLSALNNINGINNFNL
FPRMYPLYGNLLSGGSLSHHMLNPTTLPSSLPSEGGRRLLQPDHPRDFLIPAPNSAFSIT
GAAASMKDKPCSPTSGSPTAGTAASSEHIMQPKPTSVVLAATGGEEAMNLIKSKRNVTGY
KTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPFKCQTCNKGFTQLAHLQ
KHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKLCPAKFTQFVHLKLHKR
LHTRERPHKCIHCHKSYIHLCSLQVHLKGNCPVAPASGLSMEDLNRINEEIEKFDISDNA
DKLEEVEDNIDLTSIVEKDILTVLRREMEGANLKVSLQRNLGNGLISSGCNLYESSDMSI
MKLPHGHPLPLLPVKVKQETVEPMDP
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgctattattattattttgtacttttcctactcggaaggccagaggcgggctggcagca
cctcagggagcccctccagagctccgggcatctcagcccctcttcagccctctcagagtc
ccctcagactcccgccaggagcggcatcccctcggcggggccaaagcgaaagcgaagcgc
ggcctgaaaccctccgggggcggcggcagccatgtgacagccgggaagcggcccgaccgc
gcgggccagcggggcgccgggggctgcgcaccccacggcgggcagggcagggcagggccg
ggccgggccgagcaggcggctccccccgcccctcccctccgctccccgcgtaccccccag
gccgggcctggcgccccgcagcgctgcccccgggggaggggaccgcctctcgctgccgct
cattggggtggtcgtctctcgtattgcgcggttcttattttcattcccagcgccccgccg
ctcctgtcactgccgtcgtcgttcctcccgctcgtcccggccccgccgcccctttgtgcc
cggcgcgatgaggcggccgcgggcagcggcaggtttaaacctccagacgggttgaaggac
gcgcccgaaaggaaccacttggcagatttggtttcctctcttgaagccccactggacgtg
gagcagatccttcgcttgcaggcgcccgaggacggtttgcagaaggctgctacacagtgt
agctcggacgctgtgagtttcaagaatctggtgaaagggagagagtggacaatgaaaatg
gacatggaggatgctgacatgaccttgtggacggaggccgatttcgaagagaagtgcaca
tacattgtcaatgaccatccgtgggaccccagtgccgatggaggcaccctcactcaggca
gaggcttccttgccaaggaacttgactttcaaatatgcatcaaactgcaaagaggtcact
ggagttataagcaaagagtacatcccaaaaggaacgcgctttggacccctggtaggagag
atctataccagcgatacagttcccaagaatgcgaacagaaaatacttttggcggatctat
tcaagtggtgagcttcaccacttcattgacggatttaatgaggacaagagcaactggatg
cgttatgtaaaccctggctactcagttcaggagcagaacttggcagcctgtcagaatgga
atgaacatctacttctacactatcaagcccatccctgccaaccaagagctgcttgtgtgg
tattgccgagactttgcagagaggctgcactatccctcctccagagagctgacaatgatg
aacctcacacaaacccacgttaatccaaagcagcacagtgctgataaagatgagctctat
cagaagagcgtcccaaagaaggagcacagtgtgaaagaaatcctgaaaatggaatccagt
cctccaaaaggaaaagacttcttccagaccaacatttcaccagttactccagaaaatgac
ttggatgatttgcataagaactatagcccagagaggtgtttcttccctcgagttgtctac
ccgatccgacctcacattccagaagactatctgaaagcttccttagcatatgggatggac
agacccagctacattactcactcgcccatccagtcatctactacaccaagtccttccggg
aggagcagcccagaccaaagtttaaaaagttcaagccctcacagcagcccgggggtcaca
gtttcacctctggcaccaacttcccaagagcacagagagtcgtacccgtacctgaacgga
tcctacggctcagaaggattgggttcttatcctggatacgccccccctagccacctccca
tctgcctttctaccatcctataacccccactaccccaaatttctgttacctccattcaat
atgagctgtaataacctgagcgctttgaacaatatcaacggcatcaacaatttcaatctc
ttcccacggatgtatcccctttacggcaacctgctcagtggcggtagcctttcccatcac
atgttgaaccccaccacgctccccagctcattgcccagcgaaggaggccgtcgattgctg
cagcccgatcatccaagagacttcctcataccagcacctaacagtgccttctctatcacg
ggcgctgctgccagcatgaaggacaagccatgcagccccaccagcgggtcacccacagct
ggtacagcagccagttcagaacacataatgcaacctaaacctacctcagtggtgttggct
gccaccggcggtgaagaagccatgaatctcattaaaagcaagaggaatgtgactggttac
aaaactctcccgtacccactgaagaagcagaacgggaagatcaagtacgaatgcaacgtt
tgctccaagacctttggccagctctccaatctgaaggtgcacctccgagtacacagtgga
gagagaccatttaaatgccagacttgtaataaaggcttcacacagctggctcacctccag
aagcactatctggtacacacaggagagaagccccacgagtgtcaggtttgtcacaagcgg
ttcagcagcaccagcaatctcaaaacccacctgcggctccactctggagagaagccttac
cagtgcaagctgtgcccagccaaattcacccagtttgtgcacctgaagctgcacaagcgt
ctccacacccgggagcgtccccacaaatgcatccactgccacaagagctacattcacctt
tgcagcctccaggtccacctgaagggcaactgccctgtcgcccccgcctccggcctctcg
atggaggacctgaaccgaatcaacgaggagatcgagaagttcgacatcagtgacaatgcc
gacaagttggaagaggtggaggacaatatcgacctaacgtccatcgtggagaaggacata
ctgaccgtgctcagaagggaaatggaaggagctaacctcaaagtatctttacagaggaac
ctgggaaacggacttatctcctcaggatgcaacctttatgagtcttcagatatgtcaatt
atgaagttgcctcacggtcacccactacctctgttacctgtaaaggtcaagcaagaaaca
gttgaaccaatggacccttaa
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